Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS08340

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
1,816,409	+		LRK54_RS08330	0.53	-0.7
1,816,409	+		LRK54_RS08330	0.53	+0.0
1,816,409	+		LRK54_RS08330	0.53	+1.1
1,816,409	+		LRK54_RS08330	0.53	+0.4
1,816,409	+		LRK54_RS08330	0.53	-0.2
1,816,409	+		LRK54_RS08330	0.53	-0.3
1,816,409	+		LRK54_RS08330	0.53	-0.5
1,816,409	+		LRK54_RS08330	0.53	-0.7
1,816,410	-		LRK54_RS08330	0.53	+0.0
1,816,410	-		LRK54_RS08330	0.53	-0.7
1,816,410	-		LRK54_RS08330	0.53	-1.0
1,816,410	-		LRK54_RS08330	0.53	-0.6
1,816,410	-		LRK54_RS08330	0.53	-0.1
1,816,410	-		LRK54_RS08330	0.53	-0.6
1,816,410	-		LRK54_RS08330	0.53	-0.2
1,816,410	-		LRK54_RS08330	0.53	-2.0
1,816,410	-		LRK54_RS08330	0.53	+0.6
1,816,410	-		LRK54_RS08330	0.53	-1.3
1,816,410	-		LRK54_RS08330	0.53	+0.7
1,816,451	+		LRK54_RS08330	0.59	-0.9
1,816,451	+		LRK54_RS08330	0.59	-1.1
1,816,451	+		LRK54_RS08330	0.59	+0.3
1,816,451	+		LRK54_RS08330	0.59	+0.2
1,816,451	+		LRK54_RS08330	0.59	-0.3
1,816,451	+		LRK54_RS08330	0.59	-2.1
1,816,451	+		LRK54_RS08330	0.59	-0.5
1,816,452	-		LRK54_RS08330	0.59	+1.1
1,816,452	-		LRK54_RS08330	0.59	-1.8
1,816,452	-		LRK54_RS08330	0.59	-0.8
1,816,661	+		LRK54_RS08330	0.88	+0.7
1,816,661	+		LRK54_RS08330	0.88	-0.1
1,816,661	+		LRK54_RS08330	0.88	+0.2
1,816,661	+		LRK54_RS08330	0.88	+0.5
1,816,661	+		LRK54_RS08330	0.88	-0.6
1,816,661	+		LRK54_RS08330	0.88	+0.1
1,816,661	+		LRK54_RS08330	0.88	-0.1
1,816,662	-		LRK54_RS08330	0.88	+0.6
1,816,662	-		LRK54_RS08330	0.88	+1.2
1,816,662	-		LRK54_RS08330	0.88	+0.6
1,816,662	-		LRK54_RS08330	0.88	-1.4
1,816,662	-		LRK54_RS08330	0.88	-3.7
1,816,662	-		LRK54_RS08330	0.88	+0.1
1,816,662	-		LRK54_RS08330	0.88	-1.9
1,816,662	-		LRK54_RS08330	0.88	-0.1
1,816,701	-				-0.0
1,816,701	-				-1.4
1,816,701	-				-0.4
1,816,874	+				+1.4
1,816,874	+				-1.3
1,816,874	+				+2.1
1,816,874	+				+0.9
1,816,874	+				-0.8
1,816,874	+				+1.3
1,816,874	+				+0.7
1,816,874	+				-1.7
1,816,875	-				+0.3
1,816,875	-				-1.2
1,816,875	-				+0.1
1,816,875	-				+0.2
1,816,875	-				+1.3
1,816,875	-				-0.5
1,816,875	-				-0.1
1,816,912	+				-1.4
1,816,920	+				+0.3
1,816,920	+				-0.3
1,816,920	+				-0.4
1,816,921	-				-1.0
1,816,921	-				-2.8
1,816,921	-				-1.1
1,816,921	-				-0.3
1,816,921	-				-0.3
1,816,927	+				-0.8
1,816,927	+				-0.7
1,816,927	+				+0.4
1,816,927	+				-0.1
1,816,927	+				-0.9
1,817,074	+		LRK54_RS08335	0.45	-1.3
1,817,074	+		LRK54_RS08335	0.45	-1.3
1,817,074	+		LRK54_RS08335	0.45	-1.6
1,817,074	+		LRK54_RS08335	0.45	-0.8
1,817,074	+		LRK54_RS08335	0.45	-2.2
1,817,074	+		LRK54_RS08335	0.45	-2.3
1,817,134	+		LRK54_RS08335	0.59	+0.5
1,817,134	+		LRK54_RS08335	0.59	-2.5
1,817,134	+		LRK54_RS08335	0.59	-2.2
1,817,134	+		LRK54_RS08335	0.59	-0.4
1,817,134	+		LRK54_RS08335	0.59	-0.0
1,817,134	+		LRK54_RS08335	0.59	+1.1
1,817,134	+		LRK54_RS08335	0.59	+0.9
1,817,134	+		LRK54_RS08335	0.59	-1.0
1,817,257	+		LRK54_RS08335	0.89	+2.5
1,817,258	-		LRK54_RS08335	0.90	-0.6
1,817,325	-				-1.9
1,817,325	-				+0.4
1,817,328	+				-0.1
1,817,329	-				-0.2
1,817,337	-				+0.4
1,817,422	+				+0.1
1,817,422	+				-0.9
1,817,422	+				+2.3
1,817,423	-				+0.1
1,817,423	-				+1.6
1,817,587	+		LRK54_RS08340	0.12	+1.9
1,817,587	+		LRK54_RS08340	0.12	-0.1
1,817,588	-		LRK54_RS08340	0.12	-0.1
1,817,588	-		LRK54_RS08340	0.12	-0.5
1,817,588	-		LRK54_RS08340	0.12	-1.3
1,817,599	+		LRK54_RS08340	0.12	-0.7
1,817,599	+		LRK54_RS08340	0.12	+0.8
1,817,599	+		LRK54_RS08340	0.12	-1.8
1,817,599	+		LRK54_RS08340	0.12	-1.7
1,817,599	+		LRK54_RS08340	0.12	+0.2
1,817,599	+		LRK54_RS08340	0.12	+0.3
1,817,629	+		LRK54_RS08340	0.14	+0.4
1,817,629	+		LRK54_RS08340	0.14	+0.7
1,817,629	+		LRK54_RS08340	0.14	-0.3
1,817,629	+		LRK54_RS08340	0.14	+0.3
1,817,629	+		LRK54_RS08340	0.14	-0.4
1,817,629	+		LRK54_RS08340	0.14	+0.1
1,817,629	+		LRK54_RS08340	0.14	-0.1
1,817,629	+		LRK54_RS08340	0.14	+1.1
1,817,629	+		LRK54_RS08340	0.14	-0.5
1,817,629	+		LRK54_RS08340	0.14	+0.5
1,817,629	+		LRK54_RS08340	0.14	-1.3
1,817,630	-		LRK54_RS08340	0.14	+1.4
1,817,630	-		LRK54_RS08340	0.14	-2.7
1,817,630	-		LRK54_RS08340	0.14	-0.1
1,817,630	-		LRK54_RS08340	0.14	-0.6
1,817,630	-		LRK54_RS08340	0.14	-0.1
1,817,686	+		LRK54_RS08340	0.17	-0.7
1,817,686	+		LRK54_RS08340	0.17	-1.7
1,817,686	+		LRK54_RS08340	0.17	-0.1
1,817,686	+		LRK54_RS08340	0.17	+1.7
1,817,687	-		LRK54_RS08340	0.17	-1.7
1,817,687	-		LRK54_RS08340	0.17	+1.3
1,817,687	-		LRK54_RS08340	0.17	-0.9
1,817,767	+		LRK54_RS08340	0.21	-1.8
1,817,767	+		LRK54_RS08340	0.21	-1.2
1,817,767	+		LRK54_RS08340	0.21	+0.3
1,817,767	+		LRK54_RS08340	0.21	-0.4
1,817,767	+		LRK54_RS08340	0.21	+1.2
1,817,767	+		LRK54_RS08340	0.21	-0.4
1,817,767	+		LRK54_RS08340	0.21	-0.4
1,817,767	+		LRK54_RS08340	0.21	+0.2
1,817,767	+		LRK54_RS08340	0.21	+1.3
1,817,768	-		LRK54_RS08340	0.22	-0.0
1,817,768	-		LRK54_RS08340	0.22	-2.6
1,817,768	-		LRK54_RS08340	0.22	-0.5
1,817,768	-		LRK54_RS08340	0.22	+0.4
1,817,768	-		LRK54_RS08340	0.22	-1.8
1,817,768	-		LRK54_RS08340	0.22	-2.1
1,817,768	-		LRK54_RS08340	0.22	+0.2
1,817,768	-		LRK54_RS08340	0.22	+0.9
1,817,768	-		LRK54_RS08340	0.22	+0.2
1,817,768	-		LRK54_RS08340	0.22	-0.2
1,817,768	-		LRK54_RS08340	0.22	-0.5
1,817,768	-		LRK54_RS08340	0.22	-1.0
1,817,768	-		LRK54_RS08340	0.22	-0.7
1,817,768	-		LRK54_RS08340	0.22	+0.0
1,817,768	-		LRK54_RS08340	0.22	-0.5
1,817,776	+		LRK54_RS08340	0.22	+0.3
1,817,776	+		LRK54_RS08340	0.22	+1.5
1,817,776	+		LRK54_RS08340	0.22	+0.3
1,817,777	-		LRK54_RS08340	0.22	-1.4
1,817,777	-		LRK54_RS08340	0.22	-0.2
1,817,791	+		LRK54_RS08340	0.23	-0.8
1,817,791	+		LRK54_RS08340	0.23	-0.4
1,817,792	-		LRK54_RS08340	0.23	-1.2
1,817,803	+		LRK54_RS08340	0.23	+0.5
1,817,803	+		LRK54_RS08340	0.23	+2.5
1,817,803	+		LRK54_RS08340	0.23	+0.4
1,817,803	+		LRK54_RS08340	0.23	-0.6
1,817,803	+		LRK54_RS08340	0.23	-1.1
1,817,803	+		LRK54_RS08340	0.23	+0.2
1,817,803	+		LRK54_RS08340	0.23	-0.8
1,817,803	+		LRK54_RS08340	0.23	-1.0
1,817,803	+		LRK54_RS08340	0.23	-1.2
1,817,803	+		LRK54_RS08340	0.23	+0.2
1,817,803	+		LRK54_RS08340	0.23	-0.4
1,817,803	+		LRK54_RS08340	0.23	-0.1
1,817,803	+		LRK54_RS08340	0.23	+0.2
1,817,803	+		LRK54_RS08340	0.23	-1.3
1,817,803	+		LRK54_RS08340	0.23	-0.7
1,817,803	+		LRK54_RS08340	0.23	-1.5
1,817,803	+		LRK54_RS08340	0.23	-0.5
1,817,803	+		LRK54_RS08340	0.23	-0.9
1,817,803	+		LRK54_RS08340	0.23	-0.5
1,817,803	+		LRK54_RS08340	0.23	-0.6
1,817,804	-		LRK54_RS08340	0.24	+0.5
1,817,804	-		LRK54_RS08340	0.24	-0.7
1,817,804	-		LRK54_RS08340	0.24	-0.8
1,817,804	-		LRK54_RS08340	0.24	-0.1
1,817,804	-		LRK54_RS08340	0.24	-0.1
1,817,804	-		LRK54_RS08340	0.24	-1.4
1,817,804	-		LRK54_RS08340	0.24	-1.2
1,817,804	-		LRK54_RS08340	0.24	+0.4
1,817,804	-		LRK54_RS08340	0.24	-0.2
1,817,804	-		LRK54_RS08340	0.24	+0.1
1,817,804	-		LRK54_RS08340	0.24	-1.2
1,817,804	-		LRK54_RS08340	0.24	-0.6
1,817,804	-		LRK54_RS08340	0.24	-0.3
1,817,804	-		LRK54_RS08340	0.24	-1.1
1,817,804	-		LRK54_RS08340	0.24	-0.2
1,817,804	-		LRK54_RS08340	0.24	-0.9
1,817,804	-		LRK54_RS08340	0.24	-1.1
1,817,804	-		LRK54_RS08340	0.24	-0.1
1,817,804	-		LRK54_RS08340	0.24	+0.7
1,817,804	-		LRK54_RS08340	0.24	+0.8
1,817,804	-		LRK54_RS08340	0.24	-0.6
1,817,804	-		LRK54_RS08340	0.24	-0.7
1,817,804	-		LRK54_RS08340	0.24	-0.7
1,817,804	-		LRK54_RS08340	0.24	-0.3
1,817,827	+		LRK54_RS08340	0.25	+1.6
1,817,827	+		LRK54_RS08340	0.25	-1.8
1,817,827	+		LRK54_RS08340	0.25	-0.1
1,817,828	-		LRK54_RS08340	0.25	-1.8
1,817,828	-		LRK54_RS08340	0.25	-1.5
1,817,828	-		LRK54_RS08340	0.25	-0.4
1,817,828	-		LRK54_RS08340	0.25	+0.7
1,817,836	+		LRK54_RS08340	0.25	-0.5
1,817,836	+		LRK54_RS08340	0.25	-1.5
1,817,837	-		LRK54_RS08340	0.25	+0.0
1,817,837	-		LRK54_RS08340	0.25	-0.8
1,817,837	-		LRK54_RS08340	0.25	-0.6
1,817,837	-		LRK54_RS08340	0.25	-0.2
1,817,837	-		LRK54_RS08340	0.25	-1.6
1,817,858	-		LRK54_RS08340	0.27	-1.1
1,817,869	+		LRK54_RS08340	0.27	-0.1
1,817,869	+		LRK54_RS08340	0.27	-1.5
1,817,869	+		LRK54_RS08340	0.27	-1.0
1,817,869	+		LRK54_RS08340	0.27	+0.5
1,817,869	+		LRK54_RS08340	0.27	-1.0
1,817,869	+		LRK54_RS08340	0.27	-0.3
1,817,869	+		LRK54_RS08340	0.27	+0.4
1,817,869	+		LRK54_RS08340	0.27	-1.1
1,817,869	+		LRK54_RS08340	0.27	-1.6
1,817,869	+		LRK54_RS08340	0.27	-0.8
1,817,869	+		LRK54_RS08340	0.27	+0.2
1,817,869	+		LRK54_RS08340	0.27	-0.3
1,817,869	+		LRK54_RS08340	0.27	-1.3
1,817,869	+		LRK54_RS08340	0.27	+1.7
1,817,869	+		LRK54_RS08340	0.27	-2.3
1,817,869	+		LRK54_RS08340	0.27	-0.0
1,817,869	+		LRK54_RS08340	0.27	+0.1
1,817,869	+		LRK54_RS08340	0.27	-0.9
1,817,869	+		LRK54_RS08340	0.27	+0.9
1,817,869	+		LRK54_RS08340	0.27	+0.5
1,817,869	+		LRK54_RS08340	0.27	-0.1
1,817,869	+		LRK54_RS08340	0.27	-0.8
1,817,869	+		LRK54_RS08340	0.27	+0.2
1,817,869	+		LRK54_RS08340	0.27	-0.3
1,817,869	+		LRK54_RS08340	0.27	-0.5
1,817,869	+		LRK54_RS08340	0.27	+2.1
1,817,869	+		LRK54_RS08340	0.27	+0.1
1,817,869	+		LRK54_RS08340	0.27	+0.2
1,817,869	+		LRK54_RS08340	0.27	-0.9
1,817,869	+		LRK54_RS08340	0.27	+0.3
1,817,869	+		LRK54_RS08340	0.27	-0.1
1,817,869	+		LRK54_RS08340	0.27	-0.7
1,817,869	+		LRK54_RS08340	0.27	-1.4
1,817,869	+		LRK54_RS08340	0.27	-0.1
1,817,869	+		LRK54_RS08340	0.27	+0.9
1,817,869	+		LRK54_RS08340	0.27	-0.6
1,817,869	+		LRK54_RS08340	0.27	+0.2
1,817,869	+		LRK54_RS08340	0.27	+0.2
1,817,870	-		LRK54_RS08340	0.27	-0.2
1,817,870	-		LRK54_RS08340	0.27	+0.2
1,817,870	-		LRK54_RS08340	0.27	+2.2
1,817,870	-		LRK54_RS08340	0.27	+0.9
1,817,870	-		LRK54_RS08340	0.27	-0.5
1,817,870	-		LRK54_RS08340	0.27	+0.5
1,817,870	-		LRK54_RS08340	0.27	-1.1
1,817,870	-		LRK54_RS08340	0.27	-1.2
1,817,870	-		LRK54_RS08340	0.27	-1.6
1,817,870	-		LRK54_RS08340	0.27	+2.2
1,817,870	-		LRK54_RS08340	0.27	-0.3
1,817,870	-		LRK54_RS08340	0.27	-0.1
1,817,870	-		LRK54_RS08340	0.27	+2.9
1,817,870	-		LRK54_RS08340	0.27	+0.1
1,817,870	-		LRK54_RS08340	0.27	+1.5
1,817,870	-		LRK54_RS08340	0.27	+1.8
1,817,870	-		LRK54_RS08340	0.27	-0.5
1,817,870	-		LRK54_RS08340	0.27	+1.2
1,817,870	-		LRK54_RS08340	0.27	-1.2
1,817,870	-		LRK54_RS08340	0.27	+0.7
1,817,870	-		LRK54_RS08340	0.27	-0.1
1,817,870	-		LRK54_RS08340	0.27	-0.5
1,817,870	-		LRK54_RS08340	0.27	-0.2
1,817,870	-		LRK54_RS08340	0.27	-0.1
1,817,870	-		LRK54_RS08340	0.27	-0.6
1,817,870	-		LRK54_RS08340	0.27	+1.5
1,817,870	-		LRK54_RS08340	0.27	-0.4
1,817,870	-		LRK54_RS08340	0.27	-1.1
1,817,870	-		LRK54_RS08340	0.27	-0.3
1,817,870	-		LRK54_RS08340	0.27	-0.2
1,817,870	-		LRK54_RS08340	0.27	+1.6
1,817,870	-		LRK54_RS08340	0.27	-2.4
1,817,870	-		LRK54_RS08340	0.27	-0.6
1,817,870	-		LRK54_RS08340	0.27	-0.8
1,817,941	+		LRK54_RS08340	0.31	-0.8
1,817,942	-		LRK54_RS08340	0.31	+0.5
1,817,942	-		LRK54_RS08340	0.31	-1.1
1,817,942	-		LRK54_RS08340	0.31	+0.2
1,817,942	-		LRK54_RS08340	0.31	+0.5
1,817,998	+		LRK54_RS08340	0.34	+0.7
1,817,998	+		LRK54_RS08340	0.34	-0.6
1,817,998	+		LRK54_RS08340	0.34	+0.9
1,817,998	+		LRK54_RS08340	0.34	-0.3
1,817,998	+		LRK54_RS08340	0.34	-0.7
1,817,998	+		LRK54_RS08340	0.34	+0.6
1,817,998	+		LRK54_RS08340	0.34	-1.6
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