Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS05980

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
1,285,139	+		LRK54_RS05970	0.64	+1.4
1,285,139	+		LRK54_RS05970	0.64	+0.3
1,285,139	+		LRK54_RS05970	0.64	+0.1
1,285,139	+		LRK54_RS05970	0.64	+0.3
1,285,139	+		LRK54_RS05970	0.64	+0.4
1,285,139	+		LRK54_RS05970	0.64	+0.8
1,285,140	-		LRK54_RS05970	0.64	-0.6
1,285,140	-		LRK54_RS05970	0.64	+0.2
1,285,140	-		LRK54_RS05970	0.64	-0.5
1,285,140	-		LRK54_RS05970	0.64	+0.0
1,285,140	-		LRK54_RS05970	0.64	+0.9
1,285,140	-		LRK54_RS05970	0.64	-0.4
1,285,142	-		LRK54_RS05970	0.65	-0.4
1,285,469	+		LRK54_RS05975	0.25	+0.1
1,285,469	+		LRK54_RS05975	0.25	-0.3
1,285,469	+		LRK54_RS05975	0.25	-0.5
1,285,469	+		LRK54_RS05975	0.25	-1.1
1,285,469	+		LRK54_RS05975	0.25	-0.5
1,285,469	+		LRK54_RS05975	0.25	+0.4
1,285,469	+		LRK54_RS05975	0.25	+0.1
1,285,470	-		LRK54_RS05975	0.25	+0.1
1,285,470	-		LRK54_RS05975	0.25	-0.1
1,285,470	-		LRK54_RS05975	0.25	+1.2
1,285,470	-		LRK54_RS05975	0.25	+0.2
1,285,470	-		LRK54_RS05975	0.25	+2.4
1,285,470	-		LRK54_RS05975	0.25	+0.5
1,285,470	-		LRK54_RS05975	0.25	-0.1
1,285,470	-		LRK54_RS05975	0.25	-1.3
1,285,559	+		LRK54_RS05975	0.37	+0.9
1,285,559	+		LRK54_RS05975	0.37	-0.9
1,285,559	+		LRK54_RS05975	0.37	-0.0
1,285,560	-		LRK54_RS05975	0.37	+0.4
1,285,560	-		LRK54_RS05975	0.37	+0.2
1,285,560	-		LRK54_RS05975	0.37	+0.7
1,285,560	-		LRK54_RS05975	0.37	+0.6
1,285,718	+		LRK54_RS05975	0.57	-0.7
1,285,718	+		LRK54_RS05975	0.57	+0.3
1,285,718	+		LRK54_RS05975	0.57	+0.0
1,285,718	+		LRK54_RS05975	0.57	+1.0
1,285,718	+		LRK54_RS05975	0.57	-0.3
1,285,718	+		LRK54_RS05975	0.57	+0.4
1,285,719	-		LRK54_RS05975	0.57	-0.4
1,285,719	-		LRK54_RS05975	0.57	+0.3
1,285,719	-		LRK54_RS05975	0.57	+0.3
1,285,719	-		LRK54_RS05975	0.57	-0.3
1,285,719	-		LRK54_RS05975	0.57	+0.8
1,285,719	-		LRK54_RS05975	0.57	+0.6
1,285,719	-		LRK54_RS05975	0.57	-0.9
1,285,719	-		LRK54_RS05975	0.57	+0.2
1,285,719	-		LRK54_RS05975	0.57	-1.7
1,285,719	-		LRK54_RS05975	0.57	-2.4
1,285,719	-		LRK54_RS05975	0.57	-1.4
1,285,838	+		LRK54_RS05975	0.72	-0.7
1,285,838	+		LRK54_RS05975	0.72	+0.4
1,285,838	+		LRK54_RS05975	0.72	-1.1
1,285,838	+		LRK54_RS05975	0.72	-0.6
1,285,838	+		LRK54_RS05975	0.72	+0.7
1,285,838	+		LRK54_RS05975	0.72	-0.4
1,285,838	+		LRK54_RS05975	0.72	-1.3
1,285,838	+		LRK54_RS05975	0.72	-0.9
1,285,839	-		LRK54_RS05975	0.72	-0.7
1,285,839	-		LRK54_RS05975	0.72	+0.6
1,285,839	-		LRK54_RS05975	0.72	-0.7
1,285,839	-		LRK54_RS05975	0.72	-0.4
1,285,839	-		LRK54_RS05975	0.72	+1.0
1,285,839	-		LRK54_RS05975	0.72	+0.1
1,285,839	-		LRK54_RS05975	0.72	-0.4
1,285,839	-		LRK54_RS05975	0.72	-0.5
1,285,839	-		LRK54_RS05975	0.72	+0.0
1,285,839	-		LRK54_RS05975	0.72	-1.1
1,285,839	-		LRK54_RS05975	0.72	-0.2
1,285,839	-		LRK54_RS05975	0.72	+2.4
1,285,892	+		LRK54_RS05975	0.78	+0.9
1,285,892	+		LRK54_RS05975	0.78	+0.6
1,285,892	+		LRK54_RS05975	0.78	-1.1
1,285,892	+		LRK54_RS05975	0.78	-0.9
1,285,892	+		LRK54_RS05975	0.78	-0.7
1,285,892	+		LRK54_RS05975	0.78	-1.4
1,285,892	+		LRK54_RS05975	0.78	-0.4
1,285,893	-		LRK54_RS05975	0.79	+0.5
1,285,893	-		LRK54_RS05975	0.79	-0.4
1,285,893	-		LRK54_RS05975	0.79	-0.1
1,285,893	-		LRK54_RS05975	0.79	-0.4
1,285,916	+		LRK54_RS05975	0.82	-0.8
1,285,916	+		LRK54_RS05975	0.82	+0.2
1,285,916	+		LRK54_RS05975	0.82	+0.4
1,285,916	+		LRK54_RS05975	0.82	-0.5
1,285,916	+		LRK54_RS05975	0.82	+0.6
1,285,916	+		LRK54_RS05975	0.82	+0.7
1,285,916	+		LRK54_RS05975	0.82	+0.3
1,285,916	+		LRK54_RS05975	0.82	-0.7
1,285,916	+		LRK54_RS05975	0.82	+0.6
1,285,917	-		LRK54_RS05975	0.82	-0.1
1,285,917	-		LRK54_RS05975	0.82	-0.7
1,285,917	-		LRK54_RS05975	0.82	-0.5
1,285,917	-		LRK54_RS05975	0.82	+0.8
1,285,917	-		LRK54_RS05975	0.82	+0.1
1,285,917	-		LRK54_RS05975	0.82	+1.4
1,285,917	-		LRK54_RS05975	0.82	-0.4
1,285,917	-		LRK54_RS05975	0.82	+1.1
1,285,943	+		LRK54_RS05975	0.85	-0.5
1,285,943	+		LRK54_RS05975	0.85	-1.1
1,285,943	+		LRK54_RS05975	0.85	-2.1
1,285,944	-		LRK54_RS05975	0.85	+0.4
1,285,944	-		LRK54_RS05975	0.85	+0.4
1,285,944	-		LRK54_RS05975	0.85	+0.3
1,285,944	-		LRK54_RS05975	0.85	+0.1
1,285,944	-		LRK54_RS05975	0.85	-0.4
1,285,944	-		LRK54_RS05975	0.85	-0.6
1,285,944	-		LRK54_RS05975	0.85	-1.1
1,286,003	+				-0.4
1,286,003	+				-0.7
1,286,003	+				+0.5
1,286,003	+				+0.4
1,286,003	+				-1.2
1,286,003	+				-0.4
1,286,003	+				+0.2
1,286,003	+				-0.8
1,286,003	+				-0.2
1,286,003	+				+0.1
1,286,003	+				-1.4
1,286,003	+				+0.9
1,286,004	-				+0.3
1,286,004	-				+0.4
1,286,004	-				-0.1
1,286,004	-				+0.6
1,286,004	-				-1.1
1,286,004	-				-0.2
1,286,004	-				+1.0
1,286,004	-				+0.5
1,286,004	-				-0.2
1,286,004	-				-0.1
1,286,004	-				-1.0
1,286,004	-				-0.7
1,286,006	+				-0.3
1,286,006	+				-0.2
1,286,006	+				-0.5
1,286,006	+				-2.0
1,286,006	+				+1.2
1,286,006	+				-0.1
1,286,006	+				-1.0
1,286,006	+				-0.2
1,286,007	-				-0.1
1,286,007	-				-0.8
1,286,007	-				-0.6
1,286,007	-				-0.7
1,286,007	-				-0.4
1,286,007	-				+0.4
1,286,158	-				-0.4
1,286,240	+		LRK54_RS05980	0.11	-0.4
1,286,240	+		LRK54_RS05980	0.11	-0.9
1,286,240	+		LRK54_RS05980	0.11	-0.9
1,286,241	-		LRK54_RS05980	0.11	-0.7
1,286,424	+		LRK54_RS05980	0.24	+0.1
1,286,478	+		LRK54_RS05980	0.28	-0.6
1,286,478	+		LRK54_RS05980	0.28	-0.7
1,286,478	+		LRK54_RS05980	0.28	-0.9
1,286,479	-		LRK54_RS05980	0.28	-0.7
1,286,479	-		LRK54_RS05980	0.28	-0.4
1,286,722	+		LRK54_RS05980	0.45	-0.9
1,286,722	+		LRK54_RS05980	0.45	+0.9
1,286,953	+		LRK54_RS05980	0.61	+2.4
1,286,954	-		LRK54_RS05980	0.61	-0.1
1,287,058	-		LRK54_RS05980	0.69	-0.6
1,287,058	-		LRK54_RS05980	0.69	-1.1
1,287,063	+		LRK54_RS05980	0.69	+0.4
1,287,063	+		LRK54_RS05980	0.69	-0.4
1,287,063	+		LRK54_RS05980	0.69	+0.9
1,287,063	+		LRK54_RS05980	0.69	-1.1
1,287,064	-		LRK54_RS05980	0.69	-0.4
1,287,066	+		LRK54_RS05980	0.69	+0.1
1,287,066	+		LRK54_RS05980	0.69	-0.7
1,287,067	-		LRK54_RS05980	0.69	-0.6
1,287,067	-		LRK54_RS05980	0.69	-0.1
1,287,069	+		LRK54_RS05980	0.69	-1.3
1,287,069	+		LRK54_RS05980	0.69	-0.7
1,287,070	-		LRK54_RS05980	0.70	+0.4
1,287,181	-		LRK54_RS05980	0.77	+1.4
1,287,181	-		LRK54_RS05980	0.77	+0.1
1,287,208	-		LRK54_RS05980	0.79	-0.7
1,287,289	+		LRK54_RS05980	0.85	-0.4
1,287,290	-		LRK54_RS05980	0.85	-0.1
1,287,300	+		LRK54_RS05980	0.86	+0.1
1,287,300	+		LRK54_RS05980	0.86	-0.1
1,287,300	+		LRK54_RS05980	0.86	-0.7
1,287,300	+		LRK54_RS05980	0.86	+0.1
1,287,300	+		LRK54_RS05980	0.86	-0.1
1,287,301	-		LRK54_RS05980	0.86	+0.1
1,287,301	-		LRK54_RS05980	0.86	+0.4
1,287,301	-		LRK54_RS05980	0.86	+0.4
1,287,625	+		LRK54_RS05985	0.23	-0.7
1,287,625	+		LRK54_RS05985	0.23	-0.6
1,287,625	+		LRK54_RS05985	0.23	+0.1
1,287,625	+		LRK54_RS05985	0.23	-0.6
1,287,625	+		LRK54_RS05985	0.23	-0.1
1,287,625	+		LRK54_RS05985	0.23	-0.1
1,287,625	+		LRK54_RS05985	0.23	+0.1
1,287,625	+		LRK54_RS05985	0.23	-0.4
1,287,626	-		LRK54_RS05985	0.23	-0.6
1,287,626	-		LRK54_RS05985	0.23	-0.4
1,287,626	-		LRK54_RS05985	0.23	-0.9
1,287,682	+		LRK54_RS05985	0.31	+0.1
1,287,683	-		LRK54_RS05985	0.31	-0.1
1,287,697	+		LRK54_RS05985	0.33	+0.1
1,287,697	+		LRK54_RS05985	0.33	-0.9
1,287,697	+		LRK54_RS05985	0.33	-0.1
1,287,703	+		LRK54_RS05985	0.34	-0.4
1,287,869	-		LRK54_RS05985	0.58	-0.6
1,288,048	+		LRK54_RS05985	0.84	-0.1
1,288,048	+		LRK54_RS05985	0.84	-0.1
1,288,049	-		LRK54_RS05985	0.84	+0.1
1,288,049	-		LRK54_RS05985	0.84	-0.9
1,288,160	+				-1.0
1,288,161	-				-1.6
1,288,161	-				-0.1
1,288,298	+		LRK54_RS05990	0.42	-0.3
1,288,298	+		LRK54_RS05990	0.42	-0.5
1,288,298	+		LRK54_RS05990	0.42	+0.9
1,288,339	+		LRK54_RS05990	0.55	+0.4
1,288,339	+		LRK54_RS05990	0.55	+0.6
1,288,339	+		LRK54_RS05990	0.55	+1.4
1,288,339	+		LRK54_RS05990	0.55	+0.6
1,288,339	+		LRK54_RS05990	0.55	+1.2
1,288,339	+		LRK54_RS05990	0.55	+0.5
1,288,339	+		LRK54_RS05990	0.55	+1.9
1,288,339	+		LRK54_RS05990	0.55	+0.9
1,288,339	+		LRK54_RS05990	0.55	+1.1
1,288,339	+		LRK54_RS05990	0.55	+0.8
1,288,339	+		LRK54_RS05990	0.55	-0.4
1,288,339	+		LRK54_RS05990	0.55	+0.1
1,288,339	+		LRK54_RS05990	0.55	+1.8
1,288,339	+		LRK54_RS05990	0.55	-0.1
1,288,372	+		LRK54_RS05990	0.65	-1.3
1,288,372	+		LRK54_RS05990	0.65	+0.6
1,288,447	+		LRK54_RS05990	0.88	+1.1
1,288,447	+		LRK54_RS05990	0.88	-1.0
1,288,447	+		LRK54_RS05990	0.88	-0.0
1,288,447	+		LRK54_RS05990	0.88	+1.2
1,288,447	+		LRK54_RS05990	0.88	-0.1
1,288,447	+		LRK54_RS05990	0.88	+0.6
1,288,447	+		LRK54_RS05990	0.88	+1.3
1,288,447	+		LRK54_RS05990	0.88	-0.7
1,288,447	+		LRK54_RS05990	0.88	+0.4
1,288,448	-		LRK54_RS05990	0.88	-0.1