Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS05765

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
1,245,135	-				-0.6
1,245,135	-				+0.7
1,245,165	+				-1.0
1,245,165	+				-0.6
1,245,176	+				-0.8
1,245,177	-				+1.2
1,245,179	+				-1.4
1,245,180	-				+2.2
1,245,222	+				+0.6
1,245,222	+				+0.2
1,245,222	+				+1.2
1,245,222	+				-0.8
1,245,222	+				-1.0
1,245,222	+				+1.7
1,245,222	+				-0.6
1,245,222	+				-0.7
1,245,222	+				-0.3
1,245,222	+				-0.4
1,245,222	+				+0.2
1,245,222	+				+0.7
1,245,222	+				-0.4
1,245,222	+				-0.3
1,245,222	+				+0.6
1,245,222	+				-0.1
1,245,222	+				+0.7
1,245,222	+				-1.3
1,245,222	+				-1.3
1,245,222	+				+0.3
1,245,222	+				+0.3
1,245,222	+				-0.7
1,245,222	+				-2.6
1,245,222	+				+0.6
1,245,222	+				+0.0
1,245,222	+				-0.4
1,245,222	+				-1.0
1,245,222	+				-0.6
1,245,222	+				-0.1
1,245,222	+				-0.9
1,245,222	+				+0.6
1,245,222	+				-0.3
1,245,222	+				+1.0
1,245,222	+				+1.3
1,245,222	+				+3.9
1,245,222	+				-1.5
1,245,222	+				-0.1
1,245,222	+				-2.2
1,245,222	+				-1.4
1,245,222	+				+1.1
1,245,223	-				-0.8
1,245,223	-				+0.4
1,245,223	-				-1.1
1,245,223	-				-0.4
1,245,223	-				+0.6
1,245,223	-				+1.1
1,245,223	-				-2.1
1,245,223	-				-1.5
1,245,223	-				-2.0
1,245,223	-				-1.6
1,245,223	-				+0.9
1,245,223	-				+0.3
1,245,223	-				-0.2
1,245,223	-				+0.7
1,245,223	-				-0.0
1,245,223	-				-1.0
1,245,223	-				-0.0
1,245,223	-				+1.6
1,245,223	-				+1.4
1,245,223	-				-1.1
1,245,223	-				-0.3
1,245,223	-				+1.0
1,245,223	-				+0.8
1,245,223	-				+0.4
1,245,470	+		LRK54_RS05760	0.25	+2.2
1,245,470	+		LRK54_RS05760	0.25	+0.7
1,245,471	-		LRK54_RS05760	0.25	-1.1
1,245,471	-		LRK54_RS05760	0.25	+1.6
1,245,557	+		LRK54_RS05760	0.40	+1.6
1,245,557	+		LRK54_RS05760	0.40	+0.7
1,245,557	+		LRK54_RS05760	0.40	-1.1
1,245,557	+		LRK54_RS05760	0.40	+0.3
1,245,557	+		LRK54_RS05760	0.40	+0.3
1,245,557	+		LRK54_RS05760	0.40	+2.4
1,245,557	+		LRK54_RS05760	0.40	-0.2
1,245,557	+		LRK54_RS05760	0.40	-0.6
1,245,557	+		LRK54_RS05760	0.40	+0.6
1,245,557	+		LRK54_RS05760	0.40	+0.2
1,245,557	+		LRK54_RS05760	0.40	+0.0
1,245,557	+		LRK54_RS05760	0.40	+0.5
1,245,557	+		LRK54_RS05760	0.40	+0.3
1,245,557	+		LRK54_RS05760	0.40	+0.3
1,245,558	-		LRK54_RS05760	0.40	-1.0
1,245,558	-		LRK54_RS05760	0.40	+0.5
1,245,558	-		LRK54_RS05760	0.40	-0.0
1,245,558	-		LRK54_RS05760	0.40	+0.4
1,245,558	-		LRK54_RS05760	0.40	+0.3
1,245,558	-		LRK54_RS05760	0.40	+0.5
1,245,558	-		LRK54_RS05760	0.40	-0.2
1,245,558	-		LRK54_RS05760	0.40	-0.9
1,245,558	-		LRK54_RS05760	0.40	+0.7
1,245,558	-		LRK54_RS05760	0.40	+0.2
1,245,558	-		LRK54_RS05760	0.40	-0.7
1,245,558	-		LRK54_RS05760	0.40	-0.4
1,245,686	+		LRK54_RS05760	0.61	+0.1
1,245,686	+		LRK54_RS05760	0.61	+0.8
1,245,686	+		LRK54_RS05760	0.61	+0.4
1,245,686	+		LRK54_RS05760	0.61	-0.0
1,245,686	+		LRK54_RS05760	0.61	-0.5
1,245,686	+		LRK54_RS05760	0.61	-0.0
1,245,686	+		LRK54_RS05760	0.61	+0.4
1,245,686	+		LRK54_RS05760	0.61	-0.6
1,245,686	+		LRK54_RS05760	0.61	-0.2
1,245,686	+		LRK54_RS05760	0.61	+0.9
1,245,686	+		LRK54_RS05760	0.61	+2.0
1,245,686	+		LRK54_RS05760	0.61	-1.7
1,245,686	+		LRK54_RS05760	0.61	+2.1
1,245,686	+		LRK54_RS05760	0.61	+0.3
1,245,686	+		LRK54_RS05760	0.61	-1.0
1,245,686	+		LRK54_RS05760	0.61	-1.7
1,245,686	+		LRK54_RS05760	0.61	+2.0
1,245,686	+		LRK54_RS05760	0.61	-0.7
1,245,686	+		LRK54_RS05760	0.61	+1.4
1,245,686	+		LRK54_RS05760	0.61	-0.1
1,245,686	+		LRK54_RS05760	0.61	+0.7
1,245,687	-		LRK54_RS05760	0.61	-0.0
1,245,687	-		LRK54_RS05760	0.61	+1.3
1,245,687	-		LRK54_RS05760	0.61	-0.2
1,245,687	-		LRK54_RS05760	0.61	-0.5
1,245,687	-		LRK54_RS05760	0.61	+0.1
1,245,687	-		LRK54_RS05760	0.61	+1.0
1,245,687	-		LRK54_RS05760	0.61	-0.3
1,245,687	-		LRK54_RS05760	0.61	+0.1
1,245,687	-		LRK54_RS05760	0.61	+0.8
1,245,687	-		LRK54_RS05760	0.61	-1.3
1,245,687	-		LRK54_RS05760	0.61	+0.9
1,245,687	-		LRK54_RS05760	0.61	+0.3
1,245,687	-		LRK54_RS05760	0.61	-1.4
1,245,687	-		LRK54_RS05760	0.61	-0.8
1,245,687	-		LRK54_RS05760	0.61	-1.2
1,245,687	-		LRK54_RS05760	0.61	+3.2
1,245,710	+		LRK54_RS05760	0.65	-0.1
1,245,710	+		LRK54_RS05760	0.65	-0.6
1,245,710	+		LRK54_RS05760	0.65	+0.2
1,245,710	+		LRK54_RS05760	0.65	+0.1
1,245,710	+		LRK54_RS05760	0.65	+0.1
1,245,710	+		LRK54_RS05760	0.65	+2.0
1,245,710	+		LRK54_RS05760	0.65	-0.7
1,245,710	+		LRK54_RS05760	0.65	-0.3
1,245,710	+		LRK54_RS05760	0.65	-0.7
1,245,710	+		LRK54_RS05760	0.65	+0.9
1,245,710	+		LRK54_RS05760	0.65	+0.8
1,245,710	+		LRK54_RS05760	0.65	+0.1
1,245,711	-		LRK54_RS05760	0.65	-1.2
1,245,711	-		LRK54_RS05760	0.65	+0.3
1,245,711	-		LRK54_RS05760	0.65	+0.1
1,245,711	-		LRK54_RS05760	0.65	+0.3
1,245,711	-		LRK54_RS05760	0.65	+0.5
1,245,711	-		LRK54_RS05760	0.65	-0.1
1,245,711	-		LRK54_RS05760	0.65	+1.0
1,245,711	-		LRK54_RS05760	0.65	-1.5
1,245,711	-		LRK54_RS05760	0.65	-0.2
1,245,711	-		LRK54_RS05760	0.65	+0.9
1,245,782	+		LRK54_RS05760	0.77	-1.6
1,245,782	+		LRK54_RS05760	0.77	-1.4
1,245,782	+		LRK54_RS05760	0.77	+0.3
1,245,783	-		LRK54_RS05760	0.77	-1.0
1,245,783	-		LRK54_RS05760	0.77	+0.5
1,245,783	-		LRK54_RS05760	0.77	-0.3
1,245,783	-		LRK54_RS05760	0.77	+0.3
1,245,783	-		LRK54_RS05760	0.77	-0.2
1,245,783	-		LRK54_RS05760	0.77	-0.9
1,245,783	-		LRK54_RS05760	0.77	-0.8
1,245,783	-		LRK54_RS05760	0.77	+1.0
1,245,803	+		LRK54_RS05760	0.81	-0.6
1,245,803	+		LRK54_RS05760	0.81	-0.1
1,245,803	+		LRK54_RS05760	0.81	-1.3
1,245,804	-		LRK54_RS05760	0.81	-0.5
1,245,839	+		LRK54_RS05760	0.86	+0.1
1,245,839	+		LRK54_RS05760	0.86	-1.0
1,245,839	+		LRK54_RS05760	0.86	+0.3
1,245,839	+		LRK54_RS05760	0.86	-1.2
1,245,839	+		LRK54_RS05760	0.86	+1.7
1,245,839	+		LRK54_RS05760	0.86	+0.6
1,245,839	+		LRK54_RS05760	0.86	+0.8
1,245,839	+		LRK54_RS05760	0.86	-1.1
1,245,839	+		LRK54_RS05760	0.86	-0.4
1,245,839	+		LRK54_RS05760	0.86	-0.1
1,245,839	+		LRK54_RS05760	0.86	-1.3
1,245,839	+		LRK54_RS05760	0.86	+0.7
1,245,839	+		LRK54_RS05760	0.86	+2.4
1,245,839	+		LRK54_RS05760	0.86	+0.0
1,245,839	+		LRK54_RS05760	0.86	+0.3
1,245,839	+		LRK54_RS05760	0.86	-0.2
1,245,839	+		LRK54_RS05760	0.86	-0.6
1,245,839	+		LRK54_RS05760	0.86	+1.4
1,245,839	+		LRK54_RS05760	0.86	-1.3
1,245,839	+		LRK54_RS05760	0.86	+0.6
1,245,839	+		LRK54_RS05760	0.86	-0.1
1,245,839	+		LRK54_RS05760	0.86	+0.1
1,245,839	+		LRK54_RS05760	0.86	-0.1
1,245,839	+		LRK54_RS05760	0.86	+1.4
1,245,839	+		LRK54_RS05760	0.86	-1.1
1,245,840	-		LRK54_RS05760	0.87	+0.1
1,245,840	-		LRK54_RS05760	0.87	+0.5
1,245,840	-		LRK54_RS05760	0.87	-0.7
1,245,840	-		LRK54_RS05760	0.87	-0.7
1,245,840	-		LRK54_RS05760	0.87	+0.2
1,245,840	-		LRK54_RS05760	0.87	-0.4
1,245,840	-		LRK54_RS05760	0.87	-0.2
1,245,840	-		LRK54_RS05760	0.87	+1.8
1,245,840	-		LRK54_RS05760	0.87	+0.4
1,245,840	-		LRK54_RS05760	0.87	-0.7
1,245,840	-		LRK54_RS05760	0.87	-0.6
1,245,840	-		LRK54_RS05760	0.87	-0.6
1,245,840	-		LRK54_RS05760	0.87	+0.2
1,245,840	-		LRK54_RS05760	0.87	-3.3
1,245,840	-		LRK54_RS05760	0.87	+0.3
1,245,840	-		LRK54_RS05760	0.87	+0.1
1,245,840	-		LRK54_RS05760	0.87	-1.1
1,245,840	-		LRK54_RS05760	0.87	-0.2
1,245,840	-		LRK54_RS05760	0.87	-0.0
1,245,840	-		LRK54_RS05760	0.87	+0.3
1,245,840	-		LRK54_RS05760	0.87	+0.3
1,245,845	+		LRK54_RS05760	0.88	-1.3
1,245,845	+		LRK54_RS05760	0.88	+0.1
1,245,845	+		LRK54_RS05760	0.88	+1.0
1,245,845	+		LRK54_RS05760	0.88	+1.0
1,245,845	+		LRK54_RS05760	0.88	-0.2
1,245,845	+		LRK54_RS05760	0.88	-0.4
1,245,845	+		LRK54_RS05760	0.88	+0.5
1,245,845	+		LRK54_RS05760	0.88	-1.0
1,245,846	-		LRK54_RS05760	0.88	+0.0
1,245,846	-		LRK54_RS05760	0.88	-0.0
1,245,846	-		LRK54_RS05760	0.88	-0.0
1,245,846	-		LRK54_RS05760	0.88	-0.7
1,245,846	-		LRK54_RS05760	0.88	-0.1
1,245,846	-		LRK54_RS05760	0.88	+1.8
1,245,846	-		LRK54_RS05760	0.88	+0.4
1,245,846	-		LRK54_RS05760	0.88	-0.0
1,245,846	-		LRK54_RS05760	0.88	+1.4
1,245,846	-		LRK54_RS05760	0.88	-0.7
1,245,846	-		LRK54_RS05760	0.88	-1.4
1,245,846	-		LRK54_RS05760	0.88	+0.1
1,245,846	-		LRK54_RS05760	0.88	+0.3
1,245,846	-		LRK54_RS05760	0.88	-0.4
1,245,846	-		LRK54_RS05760	0.88	+0.7
1,245,846	-		LRK54_RS05760	0.88	-0.1
1,245,846	-		LRK54_RS05760	0.88	-0.8
1,245,846	-		LRK54_RS05760	0.88	-0.1
1,245,846	-		LRK54_RS05760	0.88	+0.9
1,245,846	-		LRK54_RS05760	0.88	+0.1
1,245,848	+		LRK54_RS05760	0.88	+0.7
1,245,848	+		LRK54_RS05760	0.88	-0.1
1,245,848	+		LRK54_RS05760	0.88	+0.6
1,245,848	+		LRK54_RS05760	0.88	-1.6
1,245,848	+		LRK54_RS05760	0.88	-1.3
1,245,848	+		LRK54_RS05760	0.88	-0.3
1,245,848	+		LRK54_RS05760	0.88	-0.7
1,245,848	+		LRK54_RS05760	0.88	-1.8
1,245,848	+		LRK54_RS05760	0.88	+1.2
1,245,848	+		LRK54_RS05760	0.88	+0.5
1,245,848	+		LRK54_RS05760	0.88	-0.1
1,245,848	+		LRK54_RS05760	0.88	+0.2
1,245,849	-		LRK54_RS05760	0.88	+0.2
1,245,849	-		LRK54_RS05760	0.88	+0.4
1,245,849	-		LRK54_RS05760	0.88	-0.5
1,245,849	-		LRK54_RS05760	0.88	-0.5
1,245,849	-		LRK54_RS05760	0.88	-1.1
1,245,849	-		LRK54_RS05760	0.88	-0.4
1,245,849	-		LRK54_RS05760	0.88	-1.1
1,245,849	-		LRK54_RS05760	0.88	-0.7
1,245,849	-		LRK54_RS05760	0.88	-0.6
1,245,849	-		LRK54_RS05760	0.88	+0.4
1,245,849	-		LRK54_RS05760	0.88	-0.5
1,245,849	-		LRK54_RS05760	0.88	+0.6
1,245,849	-		LRK54_RS05760	0.88	+0.1
1,245,849	-		LRK54_RS05760	0.88	+0.3
1,245,908	+				-0.2
1,245,908	+				-0.7
1,245,909	-				-3.0
1,245,909	-				+1.1
1,245,909	-				-0.5
1,245,974	+				-0.2
1,245,974	+				+1.6
1,245,974	+				+0.2
1,245,974	+				+1.1
1,245,974	+				-0.6
1,245,974	+				+0.3
1,245,974	+				+0.3
1,245,974	+				+0.1
1,245,974	+				-0.4
1,245,974	+				-1.4
1,245,974	+				-1.2
1,245,975	-				+0.5
1,245,975	-				+0.2
1,245,975	-				+0.9
1,245,975	-				-1.1
1,245,975	-				-1.0
1,245,975	-				+0.4
1,245,975	-				-0.4
1,245,975	-				+0.3
1,245,975	-				+2.4
1,246,000	+				-0.6
1,246,000	+				-0.6
1,246,000	+				-0.4
1,246,000	+				-0.8
1,246,000	+				+0.0
1,246,000	+				+0.4
1,246,000	+				-0.1
1,246,000	+				-0.5
1,246,000	+				-1.1
1,246,000	+				+0.3
1,246,000	+				+0.2
1,246,001	-				-0.1
1,246,001	-				+0.8
1,246,001	-				+0.6
1,246,001	-				+0.4
1,246,001	-				+0.8
1,246,001	-				-0.7
1,246,001	-				-1.0
1,246,001	-				-2.2
1,246,001	-				+0.9
1,246,001	-				+0.4
1,246,001	-				-0.1
1,246,001	-				+0.2
1,246,001	-				-0.2
1,246,001	-				-0.5
1,246,001	-				-2.4
1,246,001	-				-0.9
1,246,001	-				+1.1
1,246,001	-				-0.3
1,246,001	-				+1.3
1,246,045	+				-2.0
1,246,045	+				+0.3
1,246,045	+				-0.2
1,246,045	+				-1.5
1,246,045	+				-0.4
1,246,045	+				-0.2
1,246,045	+				+0.2
1,246,046	-				+0.9
1,246,046	-				-2.3
1,246,046	-				+0.2
1,246,169	+				-0.9
1,246,169	+				-3.1
1,246,169	+				-1.0
1,246,169	+				+0.4
1,246,169	+				-0.5
1,246,169	+				-2.3
1,246,169	+				-1.6
1,246,169	+				+0.2
1,246,169	+				-2.8
1,246,169	+				+0.4
1,246,169	+				+0.1
1,246,169	+				-0.4
1,246,170	-				-1.4
1,246,170	-				-2.4
1,246,170	-				-1.6
1,246,170	-				-1.3
1,246,170	-				-1.4
1,246,170	-				-1.9
1,246,229	+		LRK54_RS05765	0.14	-0.7
1,246,229	+		LRK54_RS05765	0.14	-0.9
1,246,230	-		LRK54_RS05765	0.14	-0.7
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1,247,480	-		LRK54_RS05770	0.54	-2.1
1,247,480	-		LRK54_RS05770	0.54	-1.0
1,247,480	-		LRK54_RS05770	0.54	-1.3
1,247,480	-		LRK54_RS05770	0.54	-1.1
1,247,480	-		LRK54_RS05770	0.54	-3.6
1,247,480	-		LRK54_RS05770	0.54	-2.1
1,247,480	-		LRK54_RS05770	0.54	-2.6
1,247,480	-		LRK54_RS05770	0.54	-2.8
1,247,480	-		LRK54_RS05770	0.54	-2.3
1,247,480	-		LRK54_RS05770	0.54	-2.9
1,247,480	-		LRK54_RS05770	0.54	+0.2
1,247,480	-		LRK54_RS05770	0.54	-2.8
1,247,549	+		LRK54_RS05770	0.70	-1.8
1,247,549	+		LRK54_RS05770	0.70	-2.3
1,247,549	+		LRK54_RS05770	0.70	-0.7
1,247,549	+		LRK54_RS05770	0.70	-1.3
1,247,550	-		LRK54_RS05770	0.70	-2.8
1,247,550	-		LRK54_RS05770	0.70	-0.1
1,247,550	-		LRK54_RS05770	0.70	-3.9
1,247,550	-		LRK54_RS05770	0.70	-1.2
1,247,550	-		LRK54_RS05770	0.70	-0.4
1,247,566	+		LRK54_RS05770	0.74	-1.4
1,247,566	+		LRK54_RS05770	0.74	+0.1
1,247,572	+		LRK54_RS05770	0.75	-3.3
1,247,572	+		LRK54_RS05770	0.75	+0.1
1,247,572	+		LRK54_RS05770	0.75	-0.7
1,247,572	+		LRK54_RS05770	0.75	-1.6
1,247,572	+		LRK54_RS05770	0.75	-2.2
1,247,572	+		LRK54_RS05770	0.75	-1.1
1,247,572	+		LRK54_RS05770	0.75	-3.9
1,247,573	-		LRK54_RS05770	0.75	-2.6
1,247,573	-		LRK54_RS05770	0.75	-2.5
1,247,573	-		LRK54_RS05770	0.75	-1.7
1,247,573	-		LRK54_RS05770	0.75	-2.3
1,247,716	+				-1.5
1,247,716	+				-1.6
1,247,716	+				+1.1
1,247,716	+				-0.8
1,247,716	+				-1.0
1,247,716	+				-1.0
1,247,716	+				-0.2
1,247,717	-				+0.6
1,247,717	-				-0.4
1,247,717	-				-0.0
1,247,717	-				-1.8
1,247,717	-				-0.1
1,247,717	-				-1.6
1,247,717	-				-0.9
1,247,717	-				+0.1
1,247,871	+				+0.1
1,247,871	+				-1.0
1,247,871	+				-1.4
1,247,871	+				+0.1
1,247,872	-				+2.4
1,247,872	-				-0.9
1,247,872	-				+0.9
1,247,872	-				-0.1
1,247,872	-				+0.1
1,247,872	-				-0.7
1,248,045	+		LRK54_RS05775	0.18	-0.9
1,248,045	+		LRK54_RS05775	0.18	-1.3
1,248,045	+		LRK54_RS05775	0.18	-0.6
1,248,045	+		LRK54_RS05775	0.18	-1.4
1,248,045	+		LRK54_RS05775	0.18	-0.4
1,248,045	+		LRK54_RS05775	0.18	-1.1
1,248,045	+		LRK54_RS05775	0.18	+0.1
1,248,046	-		LRK54_RS05775	0.18	-1.3
1,248,046	-		LRK54_RS05775	0.18	-0.4
1,248,046	-		LRK54_RS05775	0.18	-2.8
1,248,046	-		LRK54_RS05775	0.18	-1.2
1,248,046	-		LRK54_RS05775	0.18	-2.0
1,248,046	-		LRK54_RS05775	0.18	-0.4