Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK54_RS01675 and LRK54_RS01680 are separated by 51 nucleotides LRK54_RS01680 and LRK54_RS01685 overlap by 4 nucleotides
LRK54_RS01675: LRK54_RS01675 - acetyl-CoA carboxylase, carboxyltransferase subunit beta, at 357,148 to 358,017
_RS01675
LRK54_RS01680: LRK54_RS01680 - tryptophan synthase, alpha subunit (EC 4.2.1.20) <small>(from data)</small>, at 358,069 to 358,869
_RS01680
LRK54_RS01685: LRK54_RS01685 - tryptophan synthase subunit beta, at 358,866 to 360,077
_RS01685
Position (kb) 358
359 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 358.033 kb on - strand at 358.033 kb on - strand at 358.033 kb on - strand at 358.033 kb on - strand at 358.033 kb on - strand at 358.033 kb on - strand at 358.033 kb on - strand at 358.033 kb on - strand at 358.033 kb on - strand at 358.033 kb on - strand at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.347 kb on - strand, within LRK54_RS01680 at 358.349 kb on + strand, within LRK54_RS01680 at 358.349 kb on + strand, within LRK54_RS01680 at 358.350 kb on - strand, within LRK54_RS01680 at 358.350 kb on - strand, within LRK54_RS01680 at 358.350 kb on - strand, within LRK54_RS01680 at 358.350 kb on - strand, within LRK54_RS01680 at 358.350 kb on - strand, within LRK54_RS01680 at 358.350 kb on - strand, within LRK54_RS01680 at 358.350 kb on - strand, within LRK54_RS01680 at 358.386 kb on + strand, within LRK54_RS01680 at 358.386 kb on + strand, within LRK54_RS01680 at 358.386 kb on + strand, within LRK54_RS01680 at 358.387 kb on - strand, within LRK54_RS01680 at 358.565 kb on + strand, within LRK54_RS01680 at 358.565 kb on + strand, within LRK54_RS01680 at 358.565 kb on + strand, within LRK54_RS01680 at 358.565 kb on + strand, within LRK54_RS01680 at 358.565 kb on + strand, within LRK54_RS01680 at 358.566 kb on - strand, within LRK54_RS01680 at 358.762 kb on + strand, within LRK54_RS01680 at 358.763 kb on - strand, within LRK54_RS01680 at 358.763 kb on - strand, within LRK54_RS01680 at 358.869 kb on + strand at 358.869 kb on + strand at 358.869 kb on + strand at 358.869 kb on + strand at 358.869 kb on + strand at 358.869 kb on + strand at 358.870 kb on - strand at 358.870 kb on - strand at 358.870 kb on - strand at 358.870 kb on - strand at 358.870 kb on - strand at 358.870 kb on - strand at 358.870 kb on - strand at 358.870 kb on - strand at 358.870 kb on - strand at 358.870 kb on - strand at 359.080 kb on + strand, within LRK54_RS01685 at 359.080 kb on + strand, within LRK54_RS01685 at 359.080 kb on + strand, within LRK54_RS01685 at 359.081 kb on - strand, within LRK54_RS01685 at 359.081 kb on - strand, within LRK54_RS01685 at 359.081 kb on - strand, within LRK54_RS01685 at 359.081 kb on - strand, within LRK54_RS01685 at 359.134 kb on + strand, within LRK54_RS01685 at 359.134 kb on + strand, within LRK54_RS01685 at 359.135 kb on - strand, within LRK54_RS01685 at 359.135 kb on - strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.197 kb on + strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.198 kb on - strand, within LRK54_RS01685 at 359.392 kb on + strand, within LRK54_RS01685 at 359.392 kb on + strand, within LRK54_RS01685 at 359.392 kb on + strand, within LRK54_RS01685 at 359.392 kb on + strand, within LRK54_RS01685 at 359.393 kb on - strand, within LRK54_RS01685 at 359.393 kb on - strand, within LRK54_RS01685 at 359.393 kb on - strand, within LRK54_RS01685 at 359.393 kb on - strand, within LRK54_RS01685 at 359.462 kb on - strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.494 kb on + strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.495 kb on - strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.653 kb on + strand, within LRK54_RS01685 at 359.654 kb on - strand, within LRK54_RS01685 at 359.654 kb on - strand, within LRK54_RS01685 at 359.654 kb on - strand, within LRK54_RS01685 at 359.654 kb on - strand, within LRK54_RS01685 at 359.654 kb on - strand, within LRK54_RS01685 at 359.654 kb on - strand, within LRK54_RS01685 at 359.654 kb on - strand, within LRK54_RS01685 at 359.804 kb on + strand, within LRK54_RS01685 at 359.805 kb on - strand, within LRK54_RS01685 at 359.805 kb on - strand, within LRK54_RS01685
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM remove 358,033 - -2.7 358,033 - -0.9 358,033 - -0.9 358,033 - +0.3 358,033 - -0.3 358,033 - +0.1 358,033 - -0.4 358,033 - -0.3 358,033 - -0.7 358,033 - -0.6 358,347 - LRK54_RS01680 0.35 -1.0 358,347 - LRK54_RS01680 0.35 -2.9 358,347 - LRK54_RS01680 0.35 -1.2 358,347 - LRK54_RS01680 0.35 -1.1 358,347 - LRK54_RS01680 0.35 +0.1 358,347 - LRK54_RS01680 0.35 -2.9 358,347 - LRK54_RS01680 0.35 -0.2 358,347 - LRK54_RS01680 0.35 -1.3 358,347 - LRK54_RS01680 0.35 -1.7 358,347 - +1.1 358,347 - LRK54_RS01680 0.35 -1.8 358,347 - +1.4 358,347 - LRK54_RS01680 0.35 +0.1 358,347 - LRK54_RS01680 0.35 -2.5 358,347 - LRK54_RS01680 0.35 +0.8 358,347 - LRK54_RS01680 0.35 -0.2 358,347 - LRK54_RS01680 0.35 -1.2 358,347 - LRK54_RS01680 0.35 -0.0 358,347 - LRK54_RS01680 0.35 -1.8 358,347 - LRK54_RS01680 0.35 -2.3 358,347 - LRK54_RS01680 0.35 -1.0 358,347 - LRK54_RS01680 0.35 -1.2 358,347 - LRK54_RS01680 0.35 +0.1 358,347 - LRK54_RS01680 0.35 -0.4 358,347 - LRK54_RS01680 0.35 -1.0 358,349 + LRK54_RS01680 0.35 -1.0 358,349 + LRK54_RS01680 0.35 +1.8 358,350 - LRK54_RS01680 0.35 -0.4 358,350 - LRK54_RS01680 0.35 -1.8 358,350 - LRK54_RS01680 0.35 -0.7 358,350 - LRK54_RS01680 0.35 -2.2 358,350 - LRK54_RS01680 0.35 +0.1 358,350 - LRK54_RS01680 0.35 +1.4 358,350 - LRK54_RS01680 0.35 -1.3 358,386 + LRK54_RS01680 0.40 -0.4 358,386 + LRK54_RS01680 0.40 -1.4 358,386 + LRK54_RS01680 0.40 -3.4 358,387 - LRK54_RS01680 0.40 -2.0 358,565 + LRK54_RS01680 0.62 -2.1 358,565 + LRK54_RS01680 0.62 +0.8 358,565 + LRK54_RS01680 0.62 -1.6 358,565 + LRK54_RS01680 0.62 -1.4 358,565 + LRK54_RS01680 0.62 -0.7 358,566 - LRK54_RS01680 0.62 -2.6 358,762 + LRK54_RS01680 0.87 -2.4 358,763 - LRK54_RS01680 0.87 -2.5 358,763 - LRK54_RS01680 0.87 -2.2 358,869 + -1.7 358,869 + -0.6 358,869 + -1.2 358,869 + -1.5 358,869 + -0.6 358,869 + -1.7 358,870 - -0.4 358,870 - -0.2 358,870 - +2.4 358,870 - -1.7 358,870 - +0.7 358,870 - -2.4 358,870 - -0.4 358,870 - +0.3 358,870 - -2.3 358,870 - -0.5 359,080 + LRK54_RS01685 0.18 -0.6 359,080 + LRK54_RS01685 0.18 -1.6 359,080 + LRK54_RS01685 0.18 -0.4 359,081 - LRK54_RS01685 0.18 -0.7 359,081 - LRK54_RS01685 0.18 -0.6 359,081 - LRK54_RS01685 0.18 -0.9 359,081 - LRK54_RS01685 0.18 -0.7 359,134 + LRK54_RS01685 0.22 -1.2 359,134 + LRK54_RS01685 0.22 +0.8 359,135 - LRK54_RS01685 0.22 -1.3 359,135 - LRK54_RS01685 0.22 +1.4 359,197 + LRK54_RS01685 0.27 +0.1 359,197 + LRK54_RS01685 0.27 +0.4 359,197 + LRK54_RS01685 0.27 +0.0 359,197 + LRK54_RS01685 0.27 -1.2 359,197 + LRK54_RS01685 0.27 -1.3 359,197 + LRK54_RS01685 0.27 +0.8 359,197 + LRK54_RS01685 0.27 -0.2 359,197 + LRK54_RS01685 0.27 -0.2 359,197 + LRK54_RS01685 0.27 -0.6 359,197 + LRK54_RS01685 0.27 -2.2 359,197 + LRK54_RS01685 0.27 -1.8 359,197 + LRK54_RS01685 0.27 -0.3 359,197 + LRK54_RS01685 0.27 +0.8 359,197 + LRK54_RS01685 0.27 -0.6 359,197 + LRK54_RS01685 0.27 -1.0 359,197 + LRK54_RS01685 0.27 -0.4 359,197 + LRK54_RS01685 0.27 +0.1 359,197 + LRK54_RS01685 0.27 -0.2 359,197 + LRK54_RS01685 0.27 -1.3 359,197 + LRK54_RS01685 0.27 -0.4 359,197 + LRK54_RS01685 0.27 -2.2 359,197 + LRK54_RS01685 0.27 -1.2 359,197 + LRK54_RS01685 0.27 -1.3 359,197 + LRK54_RS01685 0.27 +1.4 359,197 + LRK54_RS01685 0.27 -0.9 359,197 + LRK54_RS01685 0.27 -2.2 359,197 + LRK54_RS01685 0.27 +0.4 359,198 - LRK54_RS01685 0.27 -1.2 359,198 - LRK54_RS01685 0.27 -2.0 359,198 - LRK54_RS01685 0.27 -1.0 359,198 - LRK54_RS01685 0.27 -3.2 359,198 - LRK54_RS01685 0.27 -2.8 359,198 - LRK54_RS01685 0.27 -1.0 359,198 - LRK54_RS01685 0.27 -0.7 359,198 - LRK54_RS01685 0.27 +0.1 359,198 - LRK54_RS01685 0.27 -0.4 359,198 - LRK54_RS01685 0.27 -0.4 359,198 - LRK54_RS01685 0.27 -1.3 359,198 - LRK54_RS01685 0.27 +0.1 359,198 - LRK54_RS01685 0.27 -2.5 359,198 - LRK54_RS01685 0.27 -0.6 359,198 - LRK54_RS01685 0.27 -0.7 359,198 - LRK54_RS01685 0.27 -0.6 359,198 - LRK54_RS01685 0.27 -0.6 359,198 - LRK54_RS01685 0.27 -2.3 359,198 - LRK54_RS01685 0.27 -2.0 359,198 - LRK54_RS01685 0.27 +0.1 359,198 - LRK54_RS01685 0.27 -2.9 359,198 - LRK54_RS01685 0.27 +0.1 359,198 - LRK54_RS01685 0.27 -1.5 359,198 - LRK54_RS01685 0.27 -1.9 359,198 - LRK54_RS01685 0.27 -2.1 359,198 - LRK54_RS01685 0.27 -0.4 359,198 - LRK54_RS01685 0.27 -1.0 359,198 - LRK54_RS01685 0.27 -0.7 359,198 - LRK54_RS01685 0.27 -1.3 359,392 + LRK54_RS01685 0.43 -0.7 359,392 + LRK54_RS01685 0.43 -0.9 359,392 + LRK54_RS01685 0.43 -1.9 359,392 + LRK54_RS01685 0.43 -1.7 359,393 - LRK54_RS01685 0.43 -1.0 359,393 - LRK54_RS01685 0.43 -2.1 359,393 - LRK54_RS01685 0.43 +0.4 359,393 - LRK54_RS01685 0.43 -2.4 359,462 - LRK54_RS01685 0.49 -1.0 359,494 + LRK54_RS01685 0.52 -0.6 359,494 + LRK54_RS01685 0.52 -1.0 359,494 + LRK54_RS01685 0.52 -1.3 359,494 + LRK54_RS01685 0.52 +0.4 359,494 + LRK54_RS01685 0.52 -3.1 359,494 + LRK54_RS01685 0.52 -1.6 359,494 + LRK54_RS01685 0.52 -0.9 359,494 + LRK54_RS01685 0.52 -0.2 359,494 + LRK54_RS01685 0.52 -2.7 359,494 + LRK54_RS01685 0.52 -0.5 359,494 + LRK54_RS01685 0.52 -1.7 359,494 + LRK54_RS01685 0.52 -3.1 359,494 + LRK54_RS01685 0.52 +0.8 359,494 + LRK54_RS01685 0.52 -0.2 359,494 + LRK54_RS01685 0.52 -1.0 359,494 + LRK54_RS01685 0.52 -1.2 359,494 + LRK54_RS01685 0.52 -0.4 359,494 + LRK54_RS01685 0.52 -1.0 359,495 - LRK54_RS01685 0.52 -2.3 359,495 - LRK54_RS01685 0.52 -2.0 359,495 - LRK54_RS01685 0.52 -2.5 359,495 - LRK54_RS01685 0.52 -2.5 359,495 - LRK54_RS01685 0.52 +1.4 359,495 - LRK54_RS01685 0.52 -0.9 359,495 - LRK54_RS01685 0.52 -1.4 359,495 - LRK54_RS01685 0.52 -1.6 359,495 - LRK54_RS01685 0.52 -1.6 359,495 - LRK54_RS01685 0.52 -1.8 359,495 - LRK54_RS01685 0.52 -1.3 359,495 - LRK54_RS01685 0.52 +0.4 359,495 - LRK54_RS01685 0.52 -1.6 359,495 - LRK54_RS01685 0.52 -2.0 359,495 - LRK54_RS01685 0.52 -0.7 359,495 - LRK54_RS01685 0.52 -1.6 359,495 - LRK54_RS01685 0.52 -2.6 359,495 - LRK54_RS01685 0.52 -1.8 359,495 - LRK54_RS01685 0.52 -2.2 359,495 - LRK54_RS01685 0.52 -1.2 359,495 - LRK54_RS01685 0.52 +0.3 359,495 - LRK54_RS01685 0.52 -2.6 359,653 + LRK54_RS01685 0.65 -1.2 359,653 + LRK54_RS01685 0.65 -0.6 359,653 + LRK54_RS01685 0.65 -1.2 359,653 + LRK54_RS01685 0.65 -0.2 359,653 + LRK54_RS01685 0.65 -0.8 359,653 + LRK54_RS01685 0.65 -0.4 359,653 + LRK54_RS01685 0.65 -1.6 359,653 + LRK54_RS01685 0.65 -0.9 359,653 + LRK54_RS01685 0.65 +0.1 359,653 + LRK54_RS01685 0.65 -1.6 359,653 + LRK54_RS01685 0.65 -1.7 359,653 + LRK54_RS01685 0.65 +2.4 359,653 + LRK54_RS01685 0.65 -0.4 359,653 + LRK54_RS01685 0.65 -1.3 359,653 + LRK54_RS01685 0.65 +1.4 359,653 + LRK54_RS01685 0.65 +1.4 359,654 - LRK54_RS01685 0.65 +0.4 359,654 - LRK54_RS01685 0.65 -1.7 359,654 - LRK54_RS01685 0.65 +0.1 359,654 - LRK54_RS01685 0.65 -0.3 359,654 - LRK54_RS01685 0.65 +1.4 359,654 - LRK54_RS01685 0.65 -0.7 359,654 - LRK54_RS01685 0.65 -2.4 359,804 + LRK54_RS01685 0.77 +0.6 359,805 - LRK54_RS01685 0.77 -1.2 359,805 - LRK54_RS01685 0.77 -0.4
Or see this region's nucleotide sequence