Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS00395

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
85,468	-		LRK54_RS00390	0.55	-1.0
86,184	-		LRK54_RS00395	0.11	-1.3
86,184	-		LRK54_RS00395	0.11	+0.2
86,184	-		LRK54_RS00395	0.11	-0.7
86,184	-		LRK54_RS00395	0.11	+0.3
86,184	-		LRK54_RS00395	0.11	-1.5
86,268	-		LRK54_RS00395	0.19	+0.5
86,268	-		LRK54_RS00395	0.19	-1.9
86,268	-		LRK54_RS00395	0.19	+1.9
86,573	+				+0.9
86,574	-		LRK54_RS00395	0.47	-1.0
86,574	-		LRK54_RS00395	0.47	+0.9
86,796	-		LRK54_RS00395	0.68	-1.1
87,003	-		LRK54_RS00395	0.87	-0.7
87,003	-		LRK54_RS00395	0.87	-1.3
87,003	-		LRK54_RS00395	0.87	-0.3
87,003	-		LRK54_RS00395	0.87	+0.5
87,296	+				-0.5
87,296	+				-0.6
87,296	+				-0.8
87,296	+				-0.8
87,296	+				+0.3
87,296	+				-0.8
87,296	+				-0.4
87,296	+				+0.9
87,296	+				+0.2
87,296	+				-2.4
87,296	+				-2.8
87,297	-				-0.3
87,297	-				-0.9
87,297	-				-1.8
87,297	-				+0.2
87,297	-				-1.1
87,297	-				-1.0
87,455	+		LRK54_RS00400	0.21	+0.5
87,455	+		LRK54_RS00400	0.21	-0.5
87,455	+		LRK54_RS00400	0.21	-0.3
87,456	-		LRK54_RS00400	0.21	+1.5
87,456	-		LRK54_RS00400	0.21	-2.2
87,456	-		LRK54_RS00400	0.21	-0.1
87,456	-		LRK54_RS00400	0.21	-1.1
87,456	-		LRK54_RS00400	0.21	+0.4
87,458	+		LRK54_RS00400	0.22	-0.8
87,459	-		LRK54_RS00400	0.22	-0.3
87,459	-		LRK54_RS00400	0.22	-1.3
87,485	+		LRK54_RS00400	0.24	-0.6
87,485	+		LRK54_RS00400	0.24	+0.2
87,485	+		LRK54_RS00400	0.24	-0.8
87,485	+		LRK54_RS00400	0.24	+0.5
87,486	-		LRK54_RS00400	0.24	-0.1
87,486	-		LRK54_RS00400	0.24	-1.2
87,486	-		LRK54_RS00400	0.24	-2.6
87,486	-		LRK54_RS00400	0.24	-1.7
87,486	-		LRK54_RS00400	0.24	-1.5
87,486	-		LRK54_RS00400	0.24	-2.5
87,486	-		LRK54_RS00400	0.24	+0.2
87,486	-		LRK54_RS00400	0.24	+0.9
87,486	-		LRK54_RS00400	0.24	-0.8
87,525	+		LRK54_RS00400	0.28	+1.8
87,575	+		LRK54_RS00400	0.32	-1.7
87,575	+		LRK54_RS00400	0.32	-2.3
87,575	+		LRK54_RS00400	0.32	-2.8
87,575	+		LRK54_RS00400	0.32	-2.2
87,575	+		LRK54_RS00400	0.32	-0.8
87,575	+		LRK54_RS00400	0.32	-1.5
87,575	+		LRK54_RS00400	0.32	-0.1
87,575	+		LRK54_RS00400	0.32	-0.8
87,575	+		LRK54_RS00400	0.32	+0.3
87,576	-		LRK54_RS00400	0.32	-2.3
87,576	-		LRK54_RS00400	0.32	-0.2
87,576	-		LRK54_RS00400	0.32	-1.5
87,576	-		LRK54_RS00400	0.32	-3.0
87,576	-		LRK54_RS00400	0.32	-2.0
87,576	-		LRK54_RS00400	0.32	-0.3
87,576	-		LRK54_RS00400	0.32	-1.9
87,576	-		LRK54_RS00400	0.32	-0.7
87,632	+		LRK54_RS00400	0.38	-1.0
87,632	+		LRK54_RS00400	0.38	+1.1
87,633	-		LRK54_RS00400	0.38	+0.2
87,633	-		LRK54_RS00400	0.38	-2.5
87,737	+		LRK54_RS00400	0.47	+0.9
87,737	+		LRK54_RS00400	0.47	-2.3
87,737	+		LRK54_RS00400	0.47	-0.5
87,737	+		LRK54_RS00400	0.47	-2.3
87,737	+		LRK54_RS00400	0.47	+0.9
87,738	-		LRK54_RS00400	0.47	-1.8
87,738	-		LRK54_RS00400	0.47	-1.4
87,738	-		LRK54_RS00400	0.47	+2.5
87,738	-		LRK54_RS00400	0.47	-0.8
87,738	-		LRK54_RS00400	0.47	+0.2
87,738	-		LRK54_RS00400	0.47	-1.3
87,738	-		LRK54_RS00400	0.47	-1.0
87,872	+		LRK54_RS00400	0.60	-2.4
87,872	+		LRK54_RS00400	0.60	-0.8
87,872	+		LRK54_RS00400	0.60	-1.2
87,872	+		LRK54_RS00400	0.60	+0.1
87,872	+		LRK54_RS00400	0.60	-2.0
87,872	+		LRK54_RS00400	0.60	-2.8
87,872	+		LRK54_RS00400	0.60	-0.8
87,872	+		LRK54_RS00400	0.60	-0.8
87,872	+		LRK54_RS00400	0.60	-0.1
87,873	-		LRK54_RS00400	0.60	-1.2
87,873	-		LRK54_RS00400	0.60	-1.5
87,873	-		LRK54_RS00400	0.60	-3.3
87,873	-		LRK54_RS00400	0.60	-0.5
87,881	+		LRK54_RS00400	0.60	+1.7
87,881	+		LRK54_RS00400	0.60	+1.5
87,881	+		LRK54_RS00400	0.60	-2.1
87,881	+		LRK54_RS00400	0.60	-0.8
87,881	+		LRK54_RS00400	0.60	-0.8
87,882	-		LRK54_RS00400	0.61	-0.7
87,882	-		LRK54_RS00400	0.61	-1.8
87,882	-		LRK54_RS00400	0.61	+0.5
87,882	-		LRK54_RS00400	0.61	-0.1
87,882	-		LRK54_RS00400	0.61	-1.3
87,882	-		LRK54_RS00400	0.61	+0.7
87,882	-		LRK54_RS00400	0.61	+0.2
87,882	-		LRK54_RS00400	0.61	+1.5
87,882	-		LRK54_RS00400	0.61	-3.6
87,932	+		LRK54_RS00400	0.65	-1.1
87,932	+		LRK54_RS00400	0.65	-0.1
87,933	-		LRK54_RS00400	0.65	-2.9
87,933	-		LRK54_RS00400	0.65	-1.8
87,933	-		LRK54_RS00400	0.65	+0.1
87,933	-		LRK54_RS00400	0.65	-0.9
87,974	+		LRK54_RS00400	0.69	-1.9
87,974	+		LRK54_RS00400	0.69	+0.9
87,974	+		LRK54_RS00400	0.69	-0.2
87,974	+		LRK54_RS00400	0.69	-2.3
87,974	+		LRK54_RS00400	0.69	-0.7
87,974	+		LRK54_RS00400	0.69	+0.2
87,974	+		LRK54_RS00400	0.69	-3.2
87,974	+		LRK54_RS00400	0.69	-1.6
87,974	+		LRK54_RS00400	0.69	-3.1
87,974	+		LRK54_RS00400	0.69	-0.3
87,974	+		LRK54_RS00400	0.69	-1.2
87,974	+		LRK54_RS00400	0.69	-2.0
87,974	+		LRK54_RS00400	0.69	-1.3
87,974	+		LRK54_RS00400	0.69	-1.4
87,975	-		LRK54_RS00400	0.69	-0.7
87,975	-		LRK54_RS00400	0.69	-1.0
87,975	-		LRK54_RS00400	0.69	-1.9
87,975	-		LRK54_RS00400	0.69	-4.3
87,975	-		LRK54_RS00400	0.69	+1.5
87,975	-		LRK54_RS00400	0.69	-1.9
87,975	-		LRK54_RS00400	0.69	-1.6
87,975	-		LRK54_RS00400	0.69	-1.8
87,975	-		LRK54_RS00400	0.69	-3.2
87,975	-		LRK54_RS00400	0.69	-2.5
87,975	-		LRK54_RS00400	0.69	-2.3
87,975	-		LRK54_RS00400	0.69	+0.2
87,975	-		LRK54_RS00400	0.69	-0.5
88,025	+		LRK54_RS00400	0.74	-2.5
88,025	+		LRK54_RS00400	0.74	+0.2
88,025	+		LRK54_RS00400	0.74	-1.2
88,025	+		LRK54_RS00400	0.74	-0.7
88,025	+		LRK54_RS00400	0.74	-1.6
88,025	+		LRK54_RS00400	0.74	-0.1
88,025	+		LRK54_RS00400	0.74	+0.8
88,025	+		LRK54_RS00400	0.74	-0.7
88,025	+		LRK54_RS00400	0.74	+2.1
88,025	+		LRK54_RS00400	0.74	-2.0
88,026	-		LRK54_RS00400	0.74	+1.2
88,026	-		LRK54_RS00400	0.74	-1.3
88,026	-		LRK54_RS00400	0.74	-1.7
88,026	-		LRK54_RS00400	0.74	-1.7
88,026	-		LRK54_RS00400	0.74	-1.6
88,026	-		LRK54_RS00400	0.74	-1.0
88,026	-		LRK54_RS00400	0.74	-1.1
88,026	-		LRK54_RS00400	0.74	-3.2
88,112	+		LRK54_RS00400	0.82	-0.1
88,112	+		LRK54_RS00400	0.82	-0.2
88,112	+		LRK54_RS00400	0.82	-2.6
88,112	+		LRK54_RS00400	0.82	+4.1
88,112	+		LRK54_RS00400	0.82	+0.2
88,112	+		LRK54_RS00400	0.82	-0.5
88,112	+		LRK54_RS00400	0.82	-0.2
88,112	+		LRK54_RS00400	0.82	-1.1
88,113	-		LRK54_RS00400	0.82	-1.1
88,113	-		LRK54_RS00400	0.82	-0.5
88,113	-		LRK54_RS00400	0.82	-2.1
88,123	+		LRK54_RS00400	0.83	+0.2
88,123	+		LRK54_RS00400	0.83	-0.5
88,123	+		LRK54_RS00400	0.83	-0.9