Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS23080

Experiment: A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.04 mg/ml
5,296,983	-		HSERO_RS23075	0.53	-0.0
5,297,089	+		HSERO_RS23075	0.60	+0.4
5,297,241	+		HSERO_RS23075	0.70	+1.6
5,297,256	+		HSERO_RS23075	0.71	+0.9
5,297,256	+		HSERO_RS23075	0.71	-0.5
5,297,311	+		HSERO_RS23075	0.74	-0.6
5,297,395	-		HSERO_RS23075	0.80	-0.2
5,297,544	+		HSERO_RS23075	0.89	+0.9
5,297,702	+				+0.0
5,297,753	+				+1.8
5,297,761	-				+0.1
5,297,763	+				-0.6
5,297,763	+				+0.0
5,297,838	-				-0.6
5,298,080	+		HSERO_RS23080	0.13	-0.1
5,298,137	-		HSERO_RS23080	0.17	-0.1
5,298,294	-		HSERO_RS23080	0.28	-0.3
5,298,358	-		HSERO_RS23080	0.32	-0.8
5,298,429	+		HSERO_RS23080	0.37	+0.8
5,298,504	-		HSERO_RS23080	0.42	+1.1
5,298,508	+		HSERO_RS23080	0.42	-0.4
5,298,681	-		HSERO_RS23080	0.54	+0.1
5,298,764	-		HSERO_RS23080	0.60	-1.1
5,299,058	-		HSERO_RS23080	0.80	-0.6
5,299,068	-		HSERO_RS23080	0.80	+0.1
5,299,153	+		HSERO_RS23080	0.86	-0.1
5,299,207	-				+0.0
5,299,250	-				+0.1
5,299,359	+				-0.6
5,299,395	-				-1.2
5,299,421	-				-0.1
5,299,657	-		HSERO_RS23085	0.25	-0.4
5,299,668	+		HSERO_RS23085	0.26	-0.4
5,299,668	+		HSERO_RS23085	0.26	-0.4
5,299,676	-		HSERO_RS23085	0.27	-0.1
5,299,745	-		HSERO_RS23085	0.32	-0.3
5,299,965	-		HSERO_RS23085	0.50	+0.6
5,300,119	+		HSERO_RS23085	0.63	-1.4
5,300,256	-		HSERO_RS23085	0.74	+0.8
5,300,312	-		HSERO_RS23085	0.79	-0.4