Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS23060

Experiment: A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.04 mg/ml
5,291,079	-		HSERO_RS23055	0.71	+0.0
5,291,228	-		HSERO_RS23055	0.76	-0.7
5,291,228	-		HSERO_RS23055	0.76	+1.0
5,291,411	+		HSERO_RS23055	0.82	+0.1
5,291,503	-		HSERO_RS23055	0.85	+0.1
5,291,708	-				+1.8
5,291,775	-				+2.7
5,291,836	-				+0.0
5,291,926	-				+1.8
5,292,009	-				-0.7
5,292,253	-		HSERO_RS23060	0.21	+0.3
5,292,298	+		HSERO_RS23060	0.25	+0.7
5,292,510	+		HSERO_RS23060	0.42	-0.2
5,292,681	-		HSERO_RS23060	0.56	-0.0
5,292,819	+		HSERO_RS23060	0.68	+0.1
5,292,829	+		HSERO_RS23060	0.68	+1.0
5,292,940	-		HSERO_RS23060	0.77	-0.0
5,292,940	-		HSERO_RS23060	0.77	+0.8
5,293,069	+		HSERO_RS23060	0.88	-0.4
5,293,120	+				+0.5
5,293,206	-				-0.3
5,293,252	+				-1.6
5,293,576	+				+0.3
5,293,665	+				-0.5
5,293,741	-		HSERO_RS23065	0.15	-0.1
5,293,845	+		HSERO_RS23065	0.22	+0.3
5,293,977	+		HSERO_RS23065	0.31	+0.3
5,293,982	+		HSERO_RS23065	0.32	-0.8
5,294,021	-		HSERO_RS23065	0.34	-0.5
5,294,030	+		HSERO_RS23065	0.35	-0.3
5,294,139	-				+1.5