Experiment: A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23045 and HSERO_RS23050 are separated by 85 nucleotides HSERO_RS23050 and HSERO_RS23055 are separated by 47 nucleotides
HSERO_RS23045: HSERO_RS23045 - methyl-accepting chemotaxis protein, at 5,285,610 to 5,287,244
_RS23045
HSERO_RS23050: HSERO_RS23050 - transporter, at 5,287,330 to 5,288,775
_RS23050
HSERO_RS23055: HSERO_RS23055 - multidrug transporter, at 5,288,823 to 5,291,978
_RS23055
Position (kb) 5287
5288
5289 Strain fitness (log2 ratio) -1
0
1
2 at 5286.346 kb on + strand, within HSERO_RS23045 at 5286.536 kb on + strand, within HSERO_RS23045 at 5286.807 kb on - strand, within HSERO_RS23045 at 5286.969 kb on + strand, within HSERO_RS23045 at 5286.996 kb on - strand, within HSERO_RS23045 at 5287.246 kb on - strand at 5287.250 kb on + strand at 5287.375 kb on + strand at 5287.388 kb on + strand at 5287.389 kb on - strand at 5287.454 kb on + strand at 5287.468 kb on - strand at 5287.505 kb on + strand, within HSERO_RS23050 at 5287.564 kb on - strand, within HSERO_RS23050 at 5287.564 kb on - strand, within HSERO_RS23050 at 5287.587 kb on + strand, within HSERO_RS23050 at 5287.590 kb on - strand at 5287.595 kb on - strand, within HSERO_RS23050 at 5288.035 kb on - strand, within HSERO_RS23050 at 5288.083 kb on + strand, within HSERO_RS23050 at 5288.154 kb on + strand, within HSERO_RS23050 at 5288.162 kb on - strand, within HSERO_RS23050 at 5288.380 kb on + strand, within HSERO_RS23050 at 5288.875 kb on - strand at 5289.274 kb on + strand, within HSERO_RS23055 at 5289.274 kb on + strand, within HSERO_RS23055 at 5289.373 kb on - strand, within HSERO_RS23055 at 5289.521 kb on - strand, within HSERO_RS23055 at 5289.590 kb on + strand, within HSERO_RS23055 at 5289.614 kb on + strand, within HSERO_RS23055
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.04 mg/ml remove 5,286,346 + HSERO_RS23045 0.45 -0.2 5,286,536 + HSERO_RS23045 0.57 +0.2 5,286,807 - HSERO_RS23045 0.73 -0.4 5,286,969 + HSERO_RS23045 0.83 -0.2 5,286,996 - HSERO_RS23045 0.85 -0.1 5,287,246 - -0.4 5,287,250 + -0.2 5,287,375 + -0.3 5,287,388 + -0.0 5,287,389 - +0.1 5,287,454 + -0.7 5,287,468 - -0.6 5,287,505 + HSERO_RS23050 0.12 +1.1 5,287,564 - HSERO_RS23050 0.16 -0.6 5,287,564 - HSERO_RS23050 0.16 -0.5 5,287,587 + HSERO_RS23050 0.18 -0.7 5,287,590 - +1.9 5,287,595 - HSERO_RS23050 0.18 -0.4 5,288,035 - HSERO_RS23050 0.49 -0.4 5,288,083 + HSERO_RS23050 0.52 +0.1 5,288,154 + HSERO_RS23050 0.57 -0.2 5,288,162 - HSERO_RS23050 0.58 -0.1 5,288,380 + HSERO_RS23050 0.73 +0.3 5,288,875 - -0.6 5,289,274 + HSERO_RS23055 0.14 -0.4 5,289,274 + HSERO_RS23055 0.14 +0.1 5,289,373 - HSERO_RS23055 0.17 +0.0 5,289,521 - HSERO_RS23055 0.22 -0.4 5,289,590 + HSERO_RS23055 0.24 +0.4 5,289,614 + HSERO_RS23055 0.25 +0.4
Or see this region's nucleotide sequence