Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21260

Experiment: A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.04 mg/ml
4,866,236	+				-0.6
4,866,339	+				-0.5
4,866,371	-				-0.5
4,866,374	+		HSERO_RS21255	0.10	-2.0
4,866,374	+		HSERO_RS21255	0.10	-1.9
4,866,374	+		HSERO_RS21255	0.10	-1.8
4,866,374	+		HSERO_RS21255	0.10	-0.5
4,866,374	+		HSERO_RS21255	0.10	-0.2
4,866,374	+		HSERO_RS21255	0.10	-0.7
4,866,374	+		HSERO_RS21255	0.10	-1.2
4,866,374	+		HSERO_RS21255	0.10	-0.8
4,866,382	-		HSERO_RS21255	0.12	-1.3
4,866,382	-		HSERO_RS21255	0.12	+0.4
4,866,582	+		HSERO_RS21255	0.48	+0.3
4,866,748	-		HSERO_RS21255	0.79	+0.3
4,866,776	+		HSERO_RS21255	0.84	-1.9
4,866,977	+				-0.6
4,867,105	+				+1.0
4,867,118	+				+0.5
4,867,207	+				+0.3
4,867,294	+		HSERO_RS21260	0.14	+0.4
4,867,294	+		HSERO_RS21260	0.14	+1.1
4,867,302	-		HSERO_RS21260	0.15	+0.4
4,867,313	+		HSERO_RS21260	0.16	-0.0
4,867,333	-				+0.3
4,867,371	-		HSERO_RS21260	0.22	-0.3
4,867,485	+		HSERO_RS21260	0.32	-0.3
4,867,538	+		HSERO_RS21260	0.37	+0.2
4,867,590	-		HSERO_RS21260	0.42	+0.1
4,867,693	-		HSERO_RS21260	0.52	+0.9
4,867,758	+		HSERO_RS21260	0.58	-0.2
4,867,824	-		HSERO_RS21260	0.64	-0.3
4,867,908	-		HSERO_RS21260	0.72	+1.1
4,867,989	+		HSERO_RS21260	0.80	+0.0
4,868,180	-				+0.3
4,868,194	+				+1.4
4,868,218	-				+0.2
4,868,570	+				-0.5
4,868,608	+				+0.6
4,868,681	+				-0.1
4,868,720	+		HSERO_RS21265	0.14	+3.4
4,868,773	+		HSERO_RS21265	0.21	-0.6
4,868,812	-		HSERO_RS21265	0.26	-0.0
4,868,959	-		HSERO_RS21265	0.46	-3.6
4,869,141	-		HSERO_RS21265	0.71	+0.6