Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS17255

Experiment: A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.04 mg/ml
3,950,481	+		HSERO_RS17250	0.22	-0.9
3,950,593	-		HSERO_RS17250	0.32	-1.5
3,950,683	+		HSERO_RS17250	0.41	+0.1
3,950,693	+		HSERO_RS17250	0.42	+0.0
3,950,744	+		HSERO_RS17250	0.46	+1.1
3,950,881	-		HSERO_RS17250	0.59	+0.5
3,950,896	-		HSERO_RS17250	0.61	-1.0
3,950,960	+		HSERO_RS17250	0.67	-0.7
3,951,028	-		HSERO_RS17250	0.73	-2.5
3,951,087	+		HSERO_RS17250	0.78	+0.4
3,951,318	+				-0.1
3,951,336	+				+0.5
3,951,344	-				-0.3
3,951,344	-				+0.3
3,951,344	-				-0.7
3,951,426	-				-2.7
3,951,482	-				-2.2
3,951,609	-		HSERO_RS17255	0.18	-2.5
3,951,619	-		HSERO_RS17255	0.18	-4.3
3,951,729	-		HSERO_RS17255	0.26	-3.1
3,951,788	+		HSERO_RS17255	0.30	-1.0
3,951,796	-		HSERO_RS17255	0.31	+0.9
3,951,950	-		HSERO_RS17255	0.41	-0.4
3,951,990	-		HSERO_RS17255	0.44	-1.1
3,952,096	+		HSERO_RS17255	0.52	-2.8
3,952,416	-		HSERO_RS17255	0.74	-1.0
3,952,570	-		HSERO_RS17255	0.85	-1.7
3,952,594	-		HSERO_RS17255	0.86	-1.3
3,952,624	+		HSERO_RS17255	0.88	-1.4
3,952,632	-		HSERO_RS17255	0.89	-1.7
3,952,715	-				-2.1
3,952,787	+				-1.4
3,952,812	-				-0.2
3,952,834	+				-1.5
3,952,842	+				-2.0
3,952,985	+				-1.6
3,953,073	-		HSERO_RS17260	0.10	-2.7
3,953,201	-		HSERO_RS17260	0.21	-1.7
3,953,226	-		HSERO_RS17260	0.23	-0.4
3,953,260	+		HSERO_RS17260	0.26	-1.7
3,953,370	-		HSERO_RS17260	0.35	-2.0
3,953,767	+		HSERO_RS17260	0.68	-1.1