Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12660

Experiment: A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.04 mg/ml
2,885,485	+				-0.4
2,885,567	+				+0.2
2,885,599	-		HSERO_RS12655	0.12	-0.0
2,885,804	+		HSERO_RS12655	0.35	+0.3
2,885,855	-		HSERO_RS12655	0.41	-0.4
2,886,135	+		HSERO_RS12655	0.73	-1.2
2,886,143	-		HSERO_RS12655	0.73	+0.0
2,886,348	-				+0.9
2,886,608	-				-1.0
2,886,780	+		HSERO_RS12660	0.35	-0.5
2,887,014	+		HSERO_RS12660	0.61	-0.5
2,887,034	+		HSERO_RS12660	0.63	-0.4
2,887,255	+		HSERO_RS12660	0.88	-0.5
2,887,394	-				+0.6
2,887,404	-				-0.7
2,887,886	+				+0.0
2,888,290	-		HSERO_RS12670	0.25	+1.2
2,888,317	-		HSERO_RS12670	0.28	+2.2
2,888,334	+		HSERO_RS12670	0.30	-0.1