Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09735

Experiment: A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.04 mg/ml
2,206,047	+		HSERO_RS09730	0.52	-0.5
2,206,206	-		HSERO_RS09730	0.66	+0.2
2,206,312	-		HSERO_RS09730	0.76	+0.2
2,206,343	-		HSERO_RS09730	0.79	-0.9
2,206,675	+				+0.2
2,207,020	+		HSERO_RS09735	0.32	+0.1
2,207,082	-		HSERO_RS09735	0.37	-0.7
2,207,325	-		HSERO_RS09735	0.54	-1.4
2,207,424	-		HSERO_RS09735	0.61	-0.1
2,207,456	-		HSERO_RS09735	0.64	-0.3
2,207,791	-		HSERO_RS09735	0.88	-3.1
2,208,016	+				+0.5
2,208,021	+				-0.4
2,208,029	-				-2.1
2,208,049	+				-1.6
2,208,141	-				-0.3
2,208,292	+				+0.0
2,208,585	+		HSERO_RS09740	0.28	+0.8
2,208,753	+		HSERO_RS09740	0.42	-0.2
2,208,767	+		HSERO_RS09740	0.43	+0.1