Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09455

Experiment: A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.04 mg/ml
2,149,076	-		HSERO_RS09450	0.36	+0.8
2,149,086	-		HSERO_RS09450	0.37	+1.8
2,149,140	-		HSERO_RS09450	0.42	-0.9
2,149,425	+		HSERO_RS09450	0.66	-0.3
2,149,425	+		HSERO_RS09450	0.66	+0.3
2,149,464	+		HSERO_RS09450	0.69	+0.5
2,149,479	+		HSERO_RS09450	0.70	-0.5
2,149,515	+		HSERO_RS09450	0.73	+0.5
2,149,611	-		HSERO_RS09450	0.81	+0.8
2,149,630	+		HSERO_RS09450	0.83	-0.3
2,149,674	+		HSERO_RS09450	0.86	+0.7
2,149,682	-		HSERO_RS09450	0.87	+0.2
2,149,719	-				+0.0
2,149,887	+				+0.3
2,149,887	+				+0.4
2,149,887	+				-0.5
2,149,895	-				-0.4
2,150,485	-		HSERO_RS09455	0.28	-1.1
2,150,498	-		HSERO_RS09455	0.29	-0.6
2,150,635	+		HSERO_RS09455	0.36	-0.4
2,151,079	+		HSERO_RS09455	0.57	-0.5
2,151,548	-		HSERO_RS09455	0.80	-2.5
2,151,730	+				+2.6
2,151,742	+		HSERO_RS09455	0.89	+0.0
2,151,822	-				+0.1
2,152,787	-				-0.1
2,152,828	+				+0.1