Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09275

Experiment: A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.04 mg/ml
2,107,044	+				-0.8
2,107,179	-		HSERO_RS09270	0.11	+0.5
2,107,378	+		HSERO_RS09270	0.52	+1.2
2,107,478	+		HSERO_RS09270	0.72	+1.0
2,107,479	-		HSERO_RS09270	0.73	-0.1
2,107,626	+				-1.0
2,107,636	+				-0.2
2,107,636	+				+0.1
2,107,707	+				+0.8
2,107,725	+				+1.2
2,107,808	+				+0.7
2,108,339	+		HSERO_RS09275	0.41	+0.4
2,108,347	-		HSERO_RS09275	0.41	+0.2
2,108,397	-		HSERO_RS09275	0.44	+0.4
2,108,524	+		HSERO_RS09275	0.52	+0.3
2,108,851	+		HSERO_RS09275	0.73	+0.0
2,108,864	+		HSERO_RS09275	0.73	-2.8
2,108,894	+		HSERO_RS09275	0.75	-0.3
2,109,347	-				+1.1
2,109,775	+		HSERO_RS09280	0.28	-0.2
2,109,976	+		HSERO_RS09280	0.41	+0.0
2,110,194	-		HSERO_RS09280	0.56	+0.2
2,110,242	-		HSERO_RS09280	0.59	+0.6