Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09195

Experiment: A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.04 mg/ml
2,092,216	+		HSERO_RS09190	0.55	+0.9
2,092,376	-		HSERO_RS09190	0.64	-0.2
2,092,530	+		HSERO_RS09190	0.72	-0.9
2,092,592	+		HSERO_RS09190	0.76	-0.6
2,092,747	+		HSERO_RS09190	0.84	-0.9
2,092,747	+		HSERO_RS09190	0.84	+0.1
2,093,026	-				-0.2
2,093,160	-				-0.6
2,093,183	+				-0.1
2,093,255	+				+0.6
2,093,304	+				-0.2
2,093,361	+		HSERO_RS09195	0.12	-0.0
2,093,449	+		HSERO_RS09195	0.18	-1.0
2,093,457	-		HSERO_RS09195	0.18	-4.9
2,093,523	-		HSERO_RS09195	0.23	-1.2
2,093,573	+		HSERO_RS09195	0.26	-0.8
2,093,610	+		HSERO_RS09195	0.28	-0.8
2,093,644	-		HSERO_RS09195	0.30	+0.2
2,093,649	-		HSERO_RS09195	0.31	+0.1
2,093,763	-		HSERO_RS09195	0.38	-1.8
2,093,830	+		HSERO_RS09195	0.42	-0.2
2,093,928	+		HSERO_RS09195	0.48	+0.2
2,093,936	-				+2.8
2,094,029	+		HSERO_RS09195	0.55	-0.4
2,094,121	+		HSERO_RS09195	0.61	-0.8
2,094,129	+		HSERO_RS09195	0.61	-0.2
2,094,157	+		HSERO_RS09195	0.63	+0.4
2,094,230	-		HSERO_RS09195	0.68	-0.3
2,094,496	+		HSERO_RS09195	0.84	-0.6
2,094,909	+				-0.1
2,095,201	+		HSERO_RS09200	0.34	-0.5
2,095,201	+				-1.0
2,095,209	-		HSERO_RS09200	0.35	+1.0
2,095,209	-		HSERO_RS09200	0.35	-1.3
2,095,209	-		HSERO_RS09200	0.35	-0.2
2,095,617	+		HSERO_RS09200	0.80	+0.3