Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS24810 and CA265_RS24815 are separated by 8 nucleotides CA265_RS24815 and CA265_RS24820 are separated by 232 nucleotides CA265_RS24820 and CA265_RS24825 are separated by 17 nucleotides CA265_RS24825 and CA265_RS24830 are separated by 13 nucleotides
CA265_RS24810: CA265_RS24810 - peptide-binding protein, at 6,053,607 to 6,054,029
_RS24810
CA265_RS24815: CA265_RS24815 - hypothetical protein, at 6,054,038 to 6,054,475
_RS24815
CA265_RS24820: CA265_RS24820 - adenylate cyclase, at 6,054,708 to 6,055,178
_RS24820
CA265_RS24825: CA265_RS24825 - hypothetical protein, at 6,055,196 to 6,056,083
_RS24825
CA265_RS24830: CA265_RS24830 - beta-N-acetylhexosaminidase, at 6,056,097 to 6,058,046
_RS24830
Position (kb)
6054
6055
6056 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6053.710 kb on - strand, within CA265_RS24810 at 6053.729 kb on + strand, within CA265_RS24810 at 6053.730 kb on - strand, within CA265_RS24810 at 6053.772 kb on + strand, within CA265_RS24810 at 6053.833 kb on - strand, within CA265_RS24810 at 6053.833 kb on - strand, within CA265_RS24810 at 6053.882 kb on - strand, within CA265_RS24810 at 6053.903 kb on + strand, within CA265_RS24810 at 6053.937 kb on + strand, within CA265_RS24810 at 6053.965 kb on - strand, within CA265_RS24810 at 6054.000 kb on + strand at 6054.001 kb on - strand at 6054.010 kb on + strand at 6054.014 kb on + strand at 6054.021 kb on + strand at 6054.022 kb on - strand at 6054.077 kb on + strand at 6054.230 kb on + strand, within CA265_RS24815 at 6054.367 kb on + strand, within CA265_RS24815 at 6054.447 kb on - strand at 6054.455 kb on + strand at 6054.535 kb on + strand at 6054.535 kb on + strand at 6054.600 kb on - strand at 6054.699 kb on + strand at 6054.706 kb on + strand at 6054.862 kb on - strand, within CA265_RS24820 at 6054.873 kb on + strand, within CA265_RS24820 at 6054.873 kb on + strand, within CA265_RS24820 at 6054.873 kb on + strand, within CA265_RS24820 at 6054.874 kb on - strand, within CA265_RS24820 at 6054.907 kb on + strand, within CA265_RS24820 at 6055.020 kb on + strand, within CA265_RS24820 at 6055.020 kb on + strand, within CA265_RS24820 at 6055.084 kb on - strand, within CA265_RS24820 at 6055.123 kb on - strand, within CA265_RS24820 at 6055.165 kb on - strand at 6055.261 kb on - strand at 6055.273 kb on - strand at 6055.273 kb on - strand at 6055.279 kb on + strand at 6055.287 kb on + strand, within CA265_RS24825 at 6055.293 kb on - strand, within CA265_RS24825 at 6055.293 kb on - strand, within CA265_RS24825 at 6055.348 kb on + strand, within CA265_RS24825 at 6055.360 kb on - strand, within CA265_RS24825 at 6055.386 kb on + strand, within CA265_RS24825 at 6055.386 kb on + strand, within CA265_RS24825 at 6055.386 kb on + strand, within CA265_RS24825 at 6055.399 kb on + strand, within CA265_RS24825 at 6055.405 kb on - strand, within CA265_RS24825 at 6055.459 kb on + strand, within CA265_RS24825 at 6055.460 kb on - strand, within CA265_RS24825 at 6055.460 kb on - strand, within CA265_RS24825 at 6055.507 kb on + strand, within CA265_RS24825 at 6055.519 kb on + strand, within CA265_RS24825 at 6055.519 kb on + strand, within CA265_RS24825 at 6055.519 kb on + strand, within CA265_RS24825 at 6055.531 kb on + strand, within CA265_RS24825 at 6055.559 kb on + strand, within CA265_RS24825 at 6055.626 kb on - strand, within CA265_RS24825 at 6055.646 kb on - strand, within CA265_RS24825 at 6055.649 kb on - strand, within CA265_RS24825 at 6055.661 kb on + strand, within CA265_RS24825 at 6055.661 kb on + strand, within CA265_RS24825 at 6055.661 kb on + strand, within CA265_RS24825 at 6055.662 kb on - strand, within CA265_RS24825 at 6055.663 kb on + strand, within CA265_RS24825 at 6055.673 kb on + strand, within CA265_RS24825 at 6055.674 kb on - strand, within CA265_RS24825 at 6055.683 kb on + strand, within CA265_RS24825 at 6055.684 kb on - strand, within CA265_RS24825 at 6055.686 kb on + strand, within CA265_RS24825 at 6055.686 kb on + strand, within CA265_RS24825 at 6055.741 kb on + strand, within CA265_RS24825 at 6055.745 kb on + strand, within CA265_RS24825 at 6055.780 kb on + strand, within CA265_RS24825 at 6055.781 kb on - strand, within CA265_RS24825 at 6055.791 kb on - strand, within CA265_RS24825 at 6055.806 kb on + strand, within CA265_RS24825 at 6055.806 kb on + strand, within CA265_RS24825 at 6055.807 kb on - strand, within CA265_RS24825 at 6055.886 kb on + strand, within CA265_RS24825 at 6055.887 kb on - strand, within CA265_RS24825 at 6055.904 kb on + strand, within CA265_RS24825 at 6055.961 kb on + strand, within CA265_RS24825 at 6055.962 kb on - strand, within CA265_RS24825 at 6056.003 kb on + strand at 6056.024 kb on + strand at 6056.086 kb on + strand at 6056.167 kb on + strand at 6056.175 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 6,053,710 - CA265_RS24810 0.24 -0.0 6,053,729 + CA265_RS24810 0.29 +0.1 6,053,730 - CA265_RS24810 0.29 -0.7 6,053,772 + CA265_RS24810 0.39 -1.1 6,053,833 - CA265_RS24810 0.53 +0.1 6,053,833 - CA265_RS24810 0.53 -0.9 6,053,882 - CA265_RS24810 0.65 +0.0 6,053,903 + CA265_RS24810 0.70 -0.9 6,053,937 + CA265_RS24810 0.78 -0.0 6,053,965 - CA265_RS24810 0.85 -0.6 6,054,000 + -0.7 6,054,001 - +1.8 6,054,010 + -0.0 6,054,014 + +0.5 6,054,021 + -0.1 6,054,022 - -2.0 6,054,077 + -0.5 6,054,230 + CA265_RS24815 0.44 -1.5 6,054,367 + CA265_RS24815 0.75 +0.0 6,054,447 - -0.6 6,054,455 + -0.4 6,054,535 + +1.2 6,054,535 + +0.6 6,054,600 - +0.4 6,054,699 + +0.5 6,054,706 + +0.5 6,054,862 - CA265_RS24820 0.33 -0.0 6,054,873 + CA265_RS24820 0.35 -0.1 6,054,873 + CA265_RS24820 0.35 +0.5 6,054,873 + CA265_RS24820 0.35 +0.7 6,054,874 - CA265_RS24820 0.35 -0.7 6,054,907 + CA265_RS24820 0.42 +0.3 6,055,020 + CA265_RS24820 0.66 +0.2 6,055,020 + CA265_RS24820 0.66 +1.0 6,055,084 - CA265_RS24820 0.80 +0.3 6,055,123 - CA265_RS24820 0.88 -0.1 6,055,165 - +0.1 6,055,261 - -0.9 6,055,273 - -0.1 6,055,273 - -0.6 6,055,279 + -0.6 6,055,287 + CA265_RS24825 0.10 +1.1 6,055,293 - CA265_RS24825 0.11 -0.5 6,055,293 - CA265_RS24825 0.11 -0.1 6,055,348 + CA265_RS24825 0.17 +0.4 6,055,360 - CA265_RS24825 0.18 +0.5 6,055,386 + CA265_RS24825 0.21 +0.5 6,055,386 + CA265_RS24825 0.21 +0.2 6,055,386 + CA265_RS24825 0.21 +0.6 6,055,399 + CA265_RS24825 0.23 +0.9 6,055,405 - CA265_RS24825 0.24 -0.2 6,055,459 + CA265_RS24825 0.30 -0.2 6,055,460 - CA265_RS24825 0.30 +1.2 6,055,460 - CA265_RS24825 0.30 -1.5 6,055,507 + CA265_RS24825 0.35 -0.2 6,055,519 + CA265_RS24825 0.36 -1.9 6,055,519 + CA265_RS24825 0.36 -0.2 6,055,519 + CA265_RS24825 0.36 -1.0 6,055,531 + CA265_RS24825 0.38 -0.0 6,055,559 + CA265_RS24825 0.41 -0.2 6,055,626 - CA265_RS24825 0.48 -0.6 6,055,646 - CA265_RS24825 0.51 +0.3 6,055,649 - CA265_RS24825 0.51 +0.0 6,055,661 + CA265_RS24825 0.52 -0.1 6,055,661 + CA265_RS24825 0.52 -0.6 6,055,661 + CA265_RS24825 0.52 -0.5 6,055,662 - CA265_RS24825 0.52 -1.1 6,055,663 + CA265_RS24825 0.53 +0.2 6,055,673 + CA265_RS24825 0.54 -2.4 6,055,674 - CA265_RS24825 0.54 -0.4 6,055,683 + CA265_RS24825 0.55 -0.2 6,055,684 - CA265_RS24825 0.55 +1.0 6,055,686 + CA265_RS24825 0.55 -0.1 6,055,686 + CA265_RS24825 0.55 -1.3 6,055,741 + CA265_RS24825 0.61 +0.4 6,055,745 + CA265_RS24825 0.62 -0.5 6,055,780 + CA265_RS24825 0.66 +0.5 6,055,781 - CA265_RS24825 0.66 -0.7 6,055,791 - CA265_RS24825 0.67 +0.0 6,055,806 + CA265_RS24825 0.69 -0.0 6,055,806 + CA265_RS24825 0.69 -0.3 6,055,807 - CA265_RS24825 0.69 -0.4 6,055,886 + CA265_RS24825 0.78 +0.7 6,055,887 - CA265_RS24825 0.78 -0.5 6,055,904 + CA265_RS24825 0.80 +1.0 6,055,961 + CA265_RS24825 0.86 -0.1 6,055,962 - CA265_RS24825 0.86 -0.6 6,056,003 + -0.0 6,056,024 + -0.1 6,056,086 + -0.3 6,056,167 + +0.0 6,056,175 + -0.8
Or see this region's nucleotide sequence