Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS17270 and RR42_RS17275 are separated by 175 nucleotides RR42_RS17275 and RR42_RS17280 are separated by 227 nucleotides
RR42_RS17270: RR42_RS17270 - molecular chaperone DnaJ, at 3,738,499 to 3,739,650
_RS17270
RR42_RS17275: RR42_RS17275 - molecular chaperone DnaK, at 3,739,826 to 3,741,790
_RS17275
RR42_RS17280: RR42_RS17280 - ATP--cobalamin adenosyltransferase, at 3,742,018 to 3,742,563
_RS17280
Position (kb)
3739
3740
3741
3742 Strain fitness (log2 ratio)
-1
0
1 at 3739.828 kb on - strand at 3739.828 kb on - strand at 3741.956 kb on + strand at 3741.956 kb on + strand at 3742.036 kb on + strand at 3742.036 kb on + strand at 3742.081 kb on + strand, within RR42_RS17280 at 3742.081 kb on + strand, within RR42_RS17280 at 3742.113 kb on - strand, within RR42_RS17280 at 3742.268 kb on + strand, within RR42_RS17280 at 3742.268 kb on + strand, within RR42_RS17280 at 3742.268 kb on + strand, within RR42_RS17280 at 3742.268 kb on + strand, within RR42_RS17280 at 3742.268 kb on + strand, within RR42_RS17280 at 3742.269 kb on - strand, within RR42_RS17280 at 3742.269 kb on - strand, within RR42_RS17280 at 3742.269 kb on - strand, within RR42_RS17280 at 3742.269 kb on - strand, within RR42_RS17280 at 3742.323 kb on - strand, within RR42_RS17280 at 3742.323 kb on - strand, within RR42_RS17280 at 3742.323 kb on - strand, within RR42_RS17280 at 3742.323 kb on - strand, within RR42_RS17280 at 3742.594 kb on + strand at 3742.595 kb on - strand at 3742.697 kb on - strand at 3742.718 kb on + strand at 3742.718 kb on + strand at 3742.719 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 3,739,828 - +0.5 3,739,828 - +0.6 3,741,956 + +1.1 3,741,956 + +0.1 3,742,036 + +1.2 3,742,036 + -0.5 3,742,081 + RR42_RS17280 0.12 +1.0 3,742,081 + RR42_RS17280 0.12 +0.5 3,742,113 - RR42_RS17280 0.17 +0.6 3,742,268 + RR42_RS17280 0.46 -0.3 3,742,268 + RR42_RS17280 0.46 +0.1 3,742,268 + RR42_RS17280 0.46 -0.2 3,742,268 + RR42_RS17280 0.46 +0.7 3,742,268 + RR42_RS17280 0.46 +0.1 3,742,269 - RR42_RS17280 0.46 -0.2 3,742,269 - RR42_RS17280 0.46 -0.2 3,742,269 - RR42_RS17280 0.46 -0.7 3,742,269 - RR42_RS17280 0.46 +0.9 3,742,323 - RR42_RS17280 0.56 -0.0 3,742,323 - RR42_RS17280 0.56 +0.3 3,742,323 - RR42_RS17280 0.56 -0.1 3,742,323 - RR42_RS17280 0.56 -0.5 3,742,594 + -0.0 3,742,595 - +0.5 3,742,697 - -0.0 3,742,718 + +0.3 3,742,718 + +0.2 3,742,719 - -0.4
Or see this region's nucleotide sequence