Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS14500

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
3,220,172	+				-2.2
3,220,172	+				-3.5
3,220,172	+				-3.4
3,220,172	+				-1.8
3,220,172	+				-1.4
3,220,172	+				-1.4
3,220,172	+				-4.5
3,220,172	+				-2.9
3,220,172	+				-1.6
3,220,172	+				-2.7
3,220,172	+				-1.5
3,220,172	+				-2.3
3,220,173	-				-2.5
3,220,173	-				-2.0
3,220,173	-				-1.5
3,220,173	-				-2.6
3,220,173	-				-1.6
3,220,173	-				-3.8
3,220,173	-				-3.4
3,220,173	-				-4.0
3,220,173	-				-0.8
3,220,173	-				-4.1
3,220,193	+				-1.4
3,220,193	+				-1.3
3,220,193	+				-1.6
3,220,193	+				-0.2
3,220,193	+				-0.2
3,220,193	+				-2.9
3,220,193	+				-2.3
3,220,193	+				-2.6
3,220,193	+				-2.8
3,220,193	+				-4.4
3,220,193	+				-2.6
3,220,193	+				-2.7
3,220,193	+				-2.4
3,220,193	+				+0.4
3,220,193	+				-1.4
3,220,193	+				-5.0
3,220,193	+				-3.3
3,220,194	-				-2.9
3,220,194	-				-3.8
3,220,194	-				-3.6
3,220,194	-				-1.0
3,220,194	-				-2.6
3,220,194	-				-3.6
3,220,194	-				-1.5
3,220,194	-				-2.4
3,220,194	-				-3.0
3,220,194	-				-1.3
3,220,194	-				-2.0
3,220,194	-				+0.8
3,220,241	+		LRK54_RS14495	0.15	-4.3
3,220,241	+		LRK54_RS14495	0.15	-1.8
3,220,241	+		LRK54_RS14495	0.15	-1.1
3,220,241	+		LRK54_RS14495	0.15	-3.1
3,220,241	+		LRK54_RS14495	0.15	-2.4
3,220,242	-		LRK54_RS14495	0.15	-3.5
3,220,242	-		LRK54_RS14495	0.15	-3.2
3,220,242	-		LRK54_RS14495	0.15	-1.1
3,220,242	-		LRK54_RS14495	0.15	-4.2
3,220,242	-		LRK54_RS14495	0.15	-1.0
3,220,242	-		LRK54_RS14495	0.15	+0.0
3,220,242	-		LRK54_RS14495	0.15	-3.3
3,220,242	-		LRK54_RS14495	0.15	-3.4
3,220,242	-		LRK54_RS14495	0.15	-3.7
3,220,242	-		LRK54_RS14495	0.15	-4.3
3,220,256	+		LRK54_RS14495	0.17	-2.1
3,220,310	+		LRK54_RS14495	0.24	-1.3
3,220,310	+		LRK54_RS14495	0.24	-0.6
3,220,310	+		LRK54_RS14495	0.24	-2.5
3,220,310	+		LRK54_RS14495	0.24	-3.3
3,220,310	+		LRK54_RS14495	0.24	-2.1
3,220,310	+		LRK54_RS14495	0.24	-2.5
3,220,310	+		LRK54_RS14495	0.24	-3.8
3,220,310	+		LRK54_RS14495	0.24	-0.6
3,220,310	+		LRK54_RS14495	0.24	+0.0
3,220,310	+		LRK54_RS14495	0.24	-4.1
3,220,310	+		LRK54_RS14495	0.24	-3.4
3,220,310	+		LRK54_RS14495	0.24	-2.3
3,220,310	+		LRK54_RS14495	0.24	-1.2
3,220,310	+		LRK54_RS14495	0.24	-1.8
3,220,311	-		LRK54_RS14495	0.25	+1.4
3,220,311	-		LRK54_RS14495	0.25	-3.5
3,220,311	-		LRK54_RS14495	0.25	-4.2
3,220,311	-		LRK54_RS14495	0.25	-1.1
3,220,311	-		LRK54_RS14495	0.25	-2.6
3,220,311	-		LRK54_RS14495	0.25	-2.0
3,220,311	-		LRK54_RS14495	0.25	-3.3
3,220,311	-		LRK54_RS14495	0.25	-2.8
3,220,311	-		LRK54_RS14495	0.25	-3.7
3,220,311	-		LRK54_RS14495	0.25	-3.4
3,220,311	-		LRK54_RS14495	0.25	-4.7
3,220,311	-		LRK54_RS14495	0.25	-0.5
3,220,311	-		LRK54_RS14495	0.25	-4.2
3,220,311	-		LRK54_RS14495	0.25	-1.0
3,220,311	-		LRK54_RS14495	0.25	-2.4
3,220,313	-		LRK54_RS14495	0.25	-3.9
3,220,496	+		LRK54_RS14495	0.50	-1.0
3,220,496	+		LRK54_RS14495	0.50	-3.5
3,220,496	+		LRK54_RS14495	0.50	-2.4
3,220,496	+		LRK54_RS14495	0.50	-3.5
3,220,496	+		LRK54_RS14495	0.50	-2.0
3,220,496	+		LRK54_RS14495	0.50	-4.4
3,220,496	+		LRK54_RS14495	0.50	-3.1
3,220,496	+		LRK54_RS14495	0.50	-3.5
3,220,496	+		LRK54_RS14495	0.50	-2.3
3,220,496	+		LRK54_RS14495	0.50	-4.6
3,220,496	+		LRK54_RS14495	0.50	-0.4
3,220,497	-		LRK54_RS14495	0.50	-3.0
3,220,497	-		LRK54_RS14495	0.50	-1.5
3,220,497	-		LRK54_RS14495	0.50	-1.0
3,220,497	-		LRK54_RS14495	0.50	-3.2
3,220,497	-		LRK54_RS14495	0.50	-4.5
3,220,497	-		LRK54_RS14495	0.50	-3.9
3,220,497	-		LRK54_RS14495	0.50	-0.8
3,220,497	-		LRK54_RS14495	0.50	-2.1
3,220,497	-		LRK54_RS14495	0.50	-3.1
3,220,497	-		LRK54_RS14495	0.50	-0.6
3,220,497	-		LRK54_RS14495	0.50	+0.0
3,220,497	-		LRK54_RS14495	0.50	-4.8
3,220,535	+		LRK54_RS14495	0.55	+0.4
3,220,535	+		LRK54_RS14495	0.55	-3.1
3,220,535	+		LRK54_RS14495	0.55	-2.7
3,220,535	+		LRK54_RS14495	0.55	-1.3
3,220,535	+		LRK54_RS14495	0.55	-2.0
3,220,536	-		LRK54_RS14495	0.55	-3.1
3,220,536	-		LRK54_RS14495	0.55	-2.9
3,220,536	-		LRK54_RS14495	0.55	-2.7
3,220,793	+				-2.1
3,220,793	+				-3.1
3,220,793	+				-3.4
3,220,793	+				-2.3
3,220,793	+				-3.4
3,220,793	+				-1.0
3,220,793	+				-3.1
3,220,793	+				-2.9
3,220,793	+				-0.4
3,220,793	+				-2.4
3,220,793	+				-1.9
3,220,793	+				-1.0
3,220,793	+				-2.4
3,220,793	+				-3.7
3,220,794	-				-1.5
3,220,794	-				-1.5
3,220,794	-				-3.1
3,220,794	-				-3.1
3,220,794	-				-3.2
3,220,794	-				-3.3
3,220,794	-				-1.9
3,220,794	-				-3.5
3,220,794	-				-0.4
3,220,794	-				-1.2
3,220,794	-				-1.0
3,220,936	-				-1.4
3,220,936	-				-1.7
3,220,936	-				-4.3
3,220,936	-				-2.5
3,220,936	-				-2.9
3,220,936	-				-2.5
3,220,948	+				-2.0
3,220,948	+				-1.5
3,220,948	+				+0.8
3,220,949	-				-1.6
3,220,949	-				-2.5
3,221,037	+				-1.2
3,221,037	+				-4.3
3,221,037	+				-4.3
3,221,037	+				-3.6
3,221,037	+				-2.2
3,221,037	+				-3.6
3,221,037	+				-3.9
3,221,037	+				-3.0
3,221,037	+				-2.5
3,221,037	+				-1.4
3,221,037	+				-1.1
3,221,037	+				-0.4
3,221,038	-				-3.3
3,221,038	-				-2.3
3,221,038	-				-4.6
3,221,038	-				-1.6
3,221,038	-				-1.8
3,221,038	-				+1.4
3,221,038	-				-0.6
3,221,038	-				-3.1
3,221,038	-				-3.1
3,221,038	-				-2.3
3,221,072	+		LRK54_RS14500	0.11	-2.7
3,221,073	-		LRK54_RS14500	0.11	-3.2
3,221,103	+		LRK54_RS14500	0.12	-2.9
3,221,103	+		LRK54_RS14500	0.12	-2.5
3,221,103	+		LRK54_RS14500	0.12	-3.6
3,221,103	+		LRK54_RS14500	0.12	-2.2
3,221,103	+		LRK54_RS14500	0.12	-1.1
3,221,103	+		LRK54_RS14500	0.12	-0.2
3,221,103	+		LRK54_RS14500	0.12	-3.9
3,221,103	+		LRK54_RS14500	0.12	-2.8
3,221,103	+		LRK54_RS14500	0.12	-2.7
3,221,103	+		LRK54_RS14500	0.12	-1.2
3,221,103	+		LRK54_RS14500	0.12	-1.3
3,221,103	+		LRK54_RS14500	0.12	-0.4
3,221,103	+		LRK54_RS14500	0.12	-4.8
3,221,103	+		LRK54_RS14500	0.12	-0.8
3,221,103	+		LRK54_RS14500	0.12	-0.9
3,221,104	-		LRK54_RS14500	0.12	-3.5
3,221,104	-		LRK54_RS14500	0.12	-3.2
3,221,104	-		LRK54_RS14500	0.12	-2.8
3,221,104	-		LRK54_RS14500	0.12	-0.1
3,221,104	-		LRK54_RS14500	0.12	-1.3
3,221,104	-		LRK54_RS14500	0.12	-1.8
3,221,104	-		LRK54_RS14500	0.12	-3.9
3,221,104	-		LRK54_RS14500	0.12	-1.2
3,221,104	-		LRK54_RS14500	0.12	-1.9
3,221,104	-		LRK54_RS14500	0.12	-2.4
3,221,104	-		LRK54_RS14500	0.12	+1.4
3,221,104	-		LRK54_RS14500	0.12	-2.3
3,221,104	-		LRK54_RS14500	0.12	+0.5
3,221,104	-		LRK54_RS14500	0.12	-1.7
3,221,104	-		LRK54_RS14500	0.12	-2.2
3,221,148	+		LRK54_RS14500	0.15	-3.6
3,221,148	+		LRK54_RS14500	0.15	-2.3
3,221,148	+		LRK54_RS14500	0.15	+0.4
3,221,148	+		LRK54_RS14500	0.15	-1.4
3,221,148	+		LRK54_RS14500	0.15	-2.0
3,221,148	+		LRK54_RS14500	0.15	-1.2
3,221,148	+		LRK54_RS14500	0.15	-2.5
3,221,149	-		LRK54_RS14500	0.15	-2.5
3,221,149	-		LRK54_RS14500	0.15	-2.1
3,221,149	-		LRK54_RS14500	0.15	-2.2
3,221,149	-		LRK54_RS14500	0.15	-2.2
3,221,236	-		LRK54_RS14500	0.19	-4.6
3,221,236	-		LRK54_RS14500	0.19	+0.0
3,221,433	+		LRK54_RS14500	0.29	-2.0
3,221,433	+		LRK54_RS14500	0.29	-0.8
3,221,433	+		LRK54_RS14500	0.29	-0.6
3,221,433	+		LRK54_RS14500	0.29	-3.5
3,221,433	+		LRK54_RS14500	0.29	-2.4
3,221,433	+		LRK54_RS14500	0.29	-2.4
3,221,434	-		LRK54_RS14500	0.29	-3.9
3,221,434	-		LRK54_RS14500	0.29	-1.8
3,221,434	-		LRK54_RS14500	0.29	-2.2
3,221,434	-		LRK54_RS14500	0.29	+1.4
3,221,434	-		LRK54_RS14500	0.29	-3.1
3,221,434	-		LRK54_RS14500	0.29	-2.0
3,221,454	+		LRK54_RS14500	0.31	-3.7
3,221,454	+		LRK54_RS14500	0.31	-1.6
3,221,454	+		LRK54_RS14500	0.31	-1.8
3,221,454	+		LRK54_RS14500	0.31	-1.2
3,221,454	+		LRK54_RS14500	0.31	-4.4
3,221,455	-		LRK54_RS14500	0.31	-1.0
3,221,455	-		LRK54_RS14500	0.31	+0.0
3,221,455	-		LRK54_RS14500	0.31	-4.4
3,221,455	-		LRK54_RS14500	0.31	-4.6
3,221,673	+		LRK54_RS14500	0.42	-1.8
3,221,673	+		LRK54_RS14500	0.42	-3.2
3,221,673	+		LRK54_RS14500	0.42	-0.6
3,221,673	+		LRK54_RS14500	0.42	-3.3
3,221,673	+		LRK54_RS14500	0.42	-3.1
3,221,674	-		LRK54_RS14500	0.42	-2.7
3,221,674	-		LRK54_RS14500	0.42	-4.7
3,221,674	-		LRK54_RS14500	0.42	-2.1
3,221,674	-		LRK54_RS14500	0.42	-1.5
3,221,674	-		LRK54_RS14500	0.42	-4.1
3,221,674	-		LRK54_RS14500	0.42	-3.5
3,221,674	-		LRK54_RS14500	0.42	-3.4
3,221,688	+		LRK54_RS14500	0.43	-4.1
3,221,688	+		LRK54_RS14500	0.43	-2.8
3,221,688	+		LRK54_RS14500	0.43	-2.5
3,221,688	+		LRK54_RS14500	0.43	-1.9
3,221,688	+		LRK54_RS14500	0.43	-1.6
3,221,688	+		LRK54_RS14500	0.43	-2.0
3,221,688	+		LRK54_RS14500	0.43	-0.5
3,221,688	+		LRK54_RS14500	0.43	-2.5
3,221,688	+		LRK54_RS14500	0.43	-1.9
3,221,688	+		LRK54_RS14500	0.43	-0.4
3,221,688	+		LRK54_RS14500	0.43	-3.1
3,221,688	+		LRK54_RS14500	0.43	+0.4
3,221,689	-		LRK54_RS14500	0.43	-1.4
3,221,689	-		LRK54_RS14500	0.43	-3.0
3,221,689	-		LRK54_RS14500	0.43	-1.8
3,221,689	-		LRK54_RS14500	0.43	-2.8
3,221,689	-		LRK54_RS14500	0.43	-3.2
3,221,689	-		LRK54_RS14500	0.43	-0.4
3,221,689	-		LRK54_RS14500	0.43	-3.9
3,221,689	-		LRK54_RS14500	0.43	-2.6
3,221,689	-		LRK54_RS14500	0.43	-3.4
3,221,689	-		LRK54_RS14500	0.43	-3.1
3,221,689	-		LRK54_RS14500	0.43	-3.4
3,221,689	-		LRK54_RS14500	0.43	-1.0
3,221,689	-		LRK54_RS14500	0.43	-2.1
3,221,689	-		LRK54_RS14500	0.43	-4.2
3,221,689	-		LRK54_RS14500	0.43	-2.4
3,221,829	+		LRK54_RS14500	0.50	-3.7
3,221,829	+		LRK54_RS14500	0.50	-1.1
3,221,829	+		LRK54_RS14500	0.50	-3.8
3,221,829	+		LRK54_RS14500	0.50	-3.3
3,221,829	+		LRK54_RS14500	0.50	-2.5
3,221,829	+		LRK54_RS14500	0.50	-2.4
3,221,829	+		LRK54_RS14500	0.50	-2.0
3,221,830	-		LRK54_RS14500	0.50	-3.5
3,221,830	-		LRK54_RS14500	0.50	-3.2
3,221,830	-		LRK54_RS14500	0.50	-4.0
3,221,830	-		LRK54_RS14500	0.50	-2.2
3,221,830	-		LRK54_RS14500	0.50	-3.4
3,221,830	-		LRK54_RS14500	0.50	-2.4
3,221,830	-		LRK54_RS14500	0.50	-4.0
3,221,830	-		LRK54_RS14500	0.50	-2.3
3,221,830	-		LRK54_RS14500	0.50	-1.1
3,221,830	-		LRK54_RS14500	0.50	-0.4
3,221,830	-		LRK54_RS14500	0.50	-2.3
3,221,830	-		LRK54_RS14500	0.50	-2.4
3,221,830	-		LRK54_RS14500	0.50	-2.4
3,221,830	-		LRK54_RS14500	0.50	-0.1
3,221,830	-		LRK54_RS14500	0.50	-1.5
3,221,830	-		LRK54_RS14500	0.50	-2.9
3,221,830	-		LRK54_RS14500	0.50	-2.9
3,221,994	+		LRK54_RS14500	0.59	-3.3
3,221,994	+		LRK54_RS14500	0.59	-3.1
3,221,994	+		LRK54_RS14500	0.59	-1.9
3,221,995	-		LRK54_RS14500	0.59	-1.2
3,221,995	-		LRK54_RS14500	0.59	-1.5
3,221,995	-		LRK54_RS14500	0.59	-1.5
3,222,144	+		LRK54_RS14500	0.67	-1.3
3,222,144	+		LRK54_RS14500	0.67	-3.3
3,222,144	+		LRK54_RS14500	0.67	-3.4
3,222,144	+		LRK54_RS14500	0.67	-3.7
3,222,144	+		LRK54_RS14500	0.67	-1.5
3,222,144	+		LRK54_RS14500	0.67	-4.0
3,222,144	+		LRK54_RS14500	0.67	-2.5
3,222,144	+		LRK54_RS14500	0.67	-2.3
3,222,144	+		LRK54_RS14500	0.67	+0.2
3,222,144	+		LRK54_RS14500	0.67	-3.0
3,222,144	+		LRK54_RS14500	0.67	-1.3
3,222,144	+		LRK54_RS14500	0.67	-2.7
3,222,144	+		LRK54_RS14500	0.67	-2.0
3,222,144	+		LRK54_RS14500	0.67	-0.2
3,222,144	+		LRK54_RS14500	0.67	-3.9
3,222,144	+		LRK54_RS14500	0.67	-3.8
3,222,144	+		LRK54_RS14500	0.67	-3.1
3,222,144	+		LRK54_RS14500	0.67	-2.3
3,222,144	+		LRK54_RS14500	0.67	-1.2
3,222,144	+		LRK54_RS14500	0.67	-0.4
3,222,144	+		LRK54_RS14500	0.67	-2.7
3,222,145	-		LRK54_RS14500	0.67	-1.1
3,222,145	-		LRK54_RS14500	0.67	-3.4
3,222,145	-		LRK54_RS14500	0.67	-0.2
3,222,145	-		LRK54_RS14500	0.67	-3.0
3,222,145	-		LRK54_RS14500	0.67	-1.2
3,222,145	-		LRK54_RS14500	0.67	-1.9
3,222,145	-		LRK54_RS14500	0.67	-1.3
3,222,145	-		LRK54_RS14500	0.67	-1.9
3,222,145	-		LRK54_RS14500	0.67	-3.8
3,222,145	-		LRK54_RS14500	0.67	-1.7
3,222,145	-		LRK54_RS14500	0.67	-1.6
3,222,145	-		LRK54_RS14500	0.67	-4.0
3,222,145	-		LRK54_RS14500	0.67	-1.1
3,222,145	-		LRK54_RS14500	0.67	-0.4
3,222,145	-		LRK54_RS14500	0.67	-1.9
3,222,145	-		LRK54_RS14500	0.67	-2.2
3,222,145	-		LRK54_RS14500	0.67	-4.9
3,222,145	-		LRK54_RS14500	0.67	-1.3
3,222,145	-		LRK54_RS14500	0.67	+1.4
3,222,145	-		LRK54_RS14500	0.67	-2.5
3,222,145	-		LRK54_RS14500	0.67	-1.2
3,222,145	-		LRK54_RS14500	0.67	-2.0
3,222,145	-		LRK54_RS14500	0.67	-2.3
3,222,145	-		LRK54_RS14500	0.67	-0.4
3,222,145	-		LRK54_RS14500	0.67	-2.7
3,222,145	-		LRK54_RS14500	0.67	-2.3
3,222,145	-		LRK54_RS14500	0.67	-2.1
3,222,145	-		LRK54_RS14500	0.67	-1.0
3,222,145	-		LRK54_RS14500	0.67	-3.7
3,222,744	+				-3.5
3,222,744	+				-3.4
3,222,744	+				-2.0
3,222,744	+				-2.5
3,222,744	+				-0.6
3,222,744	+				-1.9
3,222,744	+				-1.4
3,222,744	+				-3.8
3,222,744	+				-1.1
3,222,744	+				-0.4
3,222,744	+				-3.5
3,222,744	+				-1.7
3,222,744	+				-2.2
3,222,744	+				-0.6
3,222,744	+				-1.1
3,222,744	+				-2.9
3,222,745	-				-3.2
3,222,745	-				-2.6
3,222,745	-				-1.7
3,222,745	-				-3.6
3,222,745	-				-3.9
3,222,745	-				-1.1
3,222,745	-				-1.9
3,222,745	-				-1.7
3,222,745	-				+0.4
3,222,745	-				-1.2
3,222,745	-				-1.4
3,222,745	-				-2.3
3,222,745	-				-0.1
3,222,745	-				-2.1
3,222,745	-				+0.0
3,222,745	-				-4.2
3,222,745	-				-2.8
3,222,745	-				-0.6
3,222,745	-				-2.8
3,222,745	-				-1.4
3,222,745	-				-1.4
3,222,745	-				-2.6
3,222,745	-				-1.7
3,222,745	-				-1.1
3,222,745	-				-6.2
3,222,758	+				-0.8
3,222,759	-				-0.6
3,222,765	+				-0.3
3,222,766	-				+0.8
3,222,889	+				+0.2
3,222,889	+				-0.3
3,222,889	+				-0.1
3,222,889	+				-1.3
3,222,889	+				-1.2
3,222,889	+				+0.2
3,222,889	+				-0.6
3,222,890	-				-0.5
3,222,890	-				+0.2
3,222,890	-				+0.8
3,222,890	-				-1.7
3,222,890	-				-0.6
3,222,890	-				-1.0
3,222,890	-				+0.2
3,222,890	-				+1.5
3,222,890	-				-0.2
3,222,890	-				+1.1
3,222,890	-				+0.2
3,222,890	-				-0.7
3,223,025	-				-0.2
3,223,118	-		LRK54_RS14505	0.20	-0.4
3,223,118	-		LRK54_RS14505	0.20	-0.8
3,223,130	-		LRK54_RS14505	0.22	-0.7
3,223,412	-		LRK54_RS14505	0.54	-1.3