Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS08210

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
1,795,035	+		LRK54_RS08205	0.19	+0.7
1,795,035	+		LRK54_RS08205	0.19	+0.0
1,795,035	+		LRK54_RS08205	0.19	+1.9
1,795,035	+		LRK54_RS08205	0.19	-1.2
1,795,036	-		LRK54_RS08205	0.19	+0.0
1,795,036	-		LRK54_RS08205	0.19	+0.1
1,795,036	-		LRK54_RS08205	0.19	-1.7
1,795,036	-		LRK54_RS08205	0.19	-0.2
1,795,036	-		LRK54_RS08205	0.19	-0.0
1,795,036	-		LRK54_RS08205	0.19	+1.0
1,795,182	+		LRK54_RS08205	0.34	-0.5
1,795,182	+		LRK54_RS08205	0.34	-1.5
1,795,182	+		LRK54_RS08205	0.34	-0.1
1,795,182	+		LRK54_RS08205	0.34	-1.0
1,795,182	+		LRK54_RS08205	0.34	-0.7
1,795,182	+		LRK54_RS08205	0.34	+1.6
1,795,182	+		LRK54_RS08205	0.34	+0.8
1,795,182	+		LRK54_RS08205	0.34	+0.7
1,795,182	+		LRK54_RS08205	0.34	-1.2
1,795,182	+		LRK54_RS08205	0.34	+0.3
1,795,182	+		LRK54_RS08205	0.34	+0.4
1,795,182	+		LRK54_RS08205	0.34	-0.9
1,795,182	+		LRK54_RS08205	0.34	-0.2
1,795,182	+		LRK54_RS08205	0.34	+0.2
1,795,182	+		LRK54_RS08205	0.34	-2.1
1,795,182	+		LRK54_RS08205	0.34	-0.8
1,795,182	+		LRK54_RS08205	0.34	-0.1
1,795,182	+		LRK54_RS08205	0.34	-0.2
1,795,182	+		LRK54_RS08205	0.34	-0.3
1,795,182	+		LRK54_RS08205	0.34	-0.9
1,795,182	+		LRK54_RS08205	0.34	-1.0
1,795,182	+		LRK54_RS08205	0.34	-2.4
1,795,182	+		LRK54_RS08205	0.34	-2.9
1,795,182	+		LRK54_RS08205	0.34	+1.1
1,795,182	+		LRK54_RS08205	0.34	-0.5
1,795,182	+		LRK54_RS08205	0.34	-1.5
1,795,182	+		LRK54_RS08205	0.34	-1.4
1,795,182	+		LRK54_RS08205	0.34	-0.0
1,795,182	+		LRK54_RS08205	0.34	-0.0
1,795,182	+		LRK54_RS08205	0.34	-1.3
1,795,182	+		LRK54_RS08205	0.34	-1.5
1,795,182	+		LRK54_RS08205	0.34	-1.3
1,795,182	+		LRK54_RS08205	0.34	+0.1
1,795,182	+		LRK54_RS08205	0.34	+0.7
1,795,182	+		LRK54_RS08205	0.34	-0.4
1,795,182	+		LRK54_RS08205	0.34	-0.9
1,795,182	+		LRK54_RS08205	0.34	-0.1
1,795,182	+		LRK54_RS08205	0.34	+1.0
1,795,182	+		LRK54_RS08205	0.34	-0.7
1,795,183	-		LRK54_RS08205	0.34	+1.3
1,795,183	-		LRK54_RS08205	0.34	-1.5
1,795,183	-		LRK54_RS08205	0.34	+0.6
1,795,183	-		LRK54_RS08205	0.34	-0.7
1,795,183	-		LRK54_RS08205	0.34	+0.6
1,795,183	-		LRK54_RS08205	0.34	+0.6
1,795,183	-		LRK54_RS08205	0.34	-2.1
1,795,183	-		LRK54_RS08205	0.34	+0.2
1,795,183	-		LRK54_RS08205	0.34	-0.5
1,795,183	-		LRK54_RS08205	0.34	-0.4
1,795,183	-		LRK54_RS08205	0.34	-0.4
1,795,183	-		LRK54_RS08205	0.34	-0.7
1,795,183	-		LRK54_RS08205	0.34	-2.0
1,795,183	-		LRK54_RS08205	0.34	+0.2
1,795,183	-		LRK54_RS08205	0.34	-1.3
1,795,183	-		LRK54_RS08205	0.34	+0.5
1,795,183	-		LRK54_RS08205	0.34	-1.0
1,795,183	-		LRK54_RS08205	0.34	-1.0
1,795,183	-		LRK54_RS08205	0.34	+0.3
1,795,183	-		LRK54_RS08205	0.34	-0.5
1,795,183	-		LRK54_RS08205	0.34	-0.0
1,795,183	-		LRK54_RS08205	0.34	-0.6
1,795,183	-		LRK54_RS08205	0.34	-2.2
1,795,183	-		LRK54_RS08205	0.34	-0.4
1,795,317	+		LRK54_RS08205	0.48	-1.9
1,795,317	+		LRK54_RS08205	0.48	-0.1
1,795,317	+		LRK54_RS08205	0.48	-1.3
1,795,317	+		LRK54_RS08205	0.48	+0.5
1,795,317	+		LRK54_RS08205	0.48	+0.1
1,795,317	+		LRK54_RS08205	0.48	+0.1
1,795,317	+		LRK54_RS08205	0.48	-0.0
1,795,317	+		LRK54_RS08205	0.48	+1.5
1,795,317	+		LRK54_RS08205	0.48	+1.6
1,795,318	-		LRK54_RS08205	0.48	-1.1
1,795,318	-		LRK54_RS08205	0.48	+1.0
1,795,318	-		LRK54_RS08205	0.48	+0.6
1,795,318	-		LRK54_RS08205	0.48	-1.0
1,795,318	-		LRK54_RS08205	0.48	-1.1
1,795,318	-		LRK54_RS08205	0.48	-0.9
1,795,318	-		LRK54_RS08205	0.48	+0.6
1,795,318	-		LRK54_RS08205	0.48	-0.4
1,795,318	-		LRK54_RS08205	0.48	+2.5
1,795,318	-		LRK54_RS08205	0.48	+0.3
1,795,318	-		LRK54_RS08205	0.48	-0.6
1,795,318	-		LRK54_RS08205	0.48	+0.1
1,795,318	-		LRK54_RS08205	0.48	-0.8
1,795,318	-		LRK54_RS08205	0.48	-0.1
1,795,318	-		LRK54_RS08205	0.48	-0.6
1,795,350	+		LRK54_RS08205	0.52	-1.0
1,795,350	+		LRK54_RS08205	0.52	+0.3
1,795,350	+		LRK54_RS08205	0.52	-1.4
1,795,350	+		LRK54_RS08205	0.52	-1.0
1,795,350	+		LRK54_RS08205	0.52	+0.8
1,795,350	+		LRK54_RS08205	0.52	-0.9
1,795,350	+		LRK54_RS08205	0.52	-0.5
1,795,350	+		LRK54_RS08205	0.52	-0.6
1,795,350	+		LRK54_RS08205	0.52	-0.1
1,795,350	+		LRK54_RS08205	0.52	+1.7
1,795,350	+		LRK54_RS08205	0.52	+0.3
1,795,350	+		LRK54_RS08205	0.52	-0.1
1,795,350	+		LRK54_RS08205	0.52	-0.6
1,795,350	+		LRK54_RS08205	0.52	-1.0
1,795,350	+		LRK54_RS08205	0.52	+0.5
1,795,350	+		LRK54_RS08205	0.52	+2.5
1,795,351	-		LRK54_RS08205	0.52	+1.6
1,795,351	-		LRK54_RS08205	0.52	+0.6
1,795,351	-		LRK54_RS08205	0.52	+0.5
1,795,351	-		LRK54_RS08205	0.52	-1.1
1,795,351	-		LRK54_RS08205	0.52	+0.4
1,795,351	-		LRK54_RS08205	0.52	-0.5
1,795,351	-		LRK54_RS08205	0.52	-1.9
1,795,351	-		LRK54_RS08205	0.52	-0.9
1,795,351	-		LRK54_RS08205	0.52	-2.0
1,795,351	-		LRK54_RS08205	0.52	-0.4
1,795,351	-		LRK54_RS08205	0.52	-0.3
1,795,351	-		LRK54_RS08205	0.52	-0.4
1,795,351	-		LRK54_RS08205	0.52	+0.1
1,795,351	-		LRK54_RS08205	0.52	+0.0
1,795,351	-		LRK54_RS08205	0.52	+0.1
1,795,351	-		LRK54_RS08205	0.52	+0.6
1,795,351	-		LRK54_RS08205	0.52	-3.8
1,795,351	-		LRK54_RS08205	0.52	+0.9
1,795,351	-		LRK54_RS08205	0.52	-0.6
1,795,351	-		LRK54_RS08205	0.52	-0.5
1,795,351	-		LRK54_RS08205	0.52	+0.9
1,795,351	-		LRK54_RS08205	0.52	-0.1
1,795,351	-		LRK54_RS08205	0.52	+0.1
1,795,351	-		LRK54_RS08205	0.52	+0.5
1,795,351	-		LRK54_RS08205	0.52	-0.5
1,795,353	+		LRK54_RS08205	0.52	+1.4
1,795,353	+		LRK54_RS08205	0.52	-0.0
1,795,353	+		LRK54_RS08205	0.52	-0.4
1,795,353	+		LRK54_RS08205	0.52	+0.2
1,795,353	+		LRK54_RS08205	0.52	-0.7
1,795,353	+		LRK54_RS08205	0.52	+1.0
1,795,353	+		LRK54_RS08205	0.52	-1.0
1,795,353	+		LRK54_RS08205	0.52	+1.1
1,795,353	+		LRK54_RS08205	0.52	-0.1
1,795,353	+		LRK54_RS08205	0.52	-1.5
1,795,353	+		LRK54_RS08205	0.52	-0.5
1,795,353	+		LRK54_RS08205	0.52	+1.3
1,795,354	-		LRK54_RS08205	0.52	+0.3
1,795,354	-		LRK54_RS08205	0.52	-0.7
1,795,354	-		LRK54_RS08205	0.52	-0.4
1,795,354	-		LRK54_RS08205	0.52	-0.6
1,795,354	-		LRK54_RS08205	0.52	-0.6
1,795,354	-		LRK54_RS08205	0.52	-0.3
1,795,354	-		LRK54_RS08205	0.52	-0.7
1,795,354	-		LRK54_RS08205	0.52	-1.0
1,795,354	-		LRK54_RS08205	0.52	-0.5
1,795,354	-		LRK54_RS08205	0.52	+2.5
1,795,518	+		LRK54_RS08205	0.69	+0.6
1,795,518	+		LRK54_RS08205	0.69	+0.2
1,795,518	+		LRK54_RS08205	0.69	+0.5
1,795,518	+		LRK54_RS08205	0.69	-0.0
1,795,518	+		LRK54_RS08205	0.69	-0.9
1,795,518	+		LRK54_RS08205	0.69	+0.5
1,795,518	+		LRK54_RS08205	0.69	+1.2
1,795,518	+		LRK54_RS08205	0.69	+0.5
1,795,518	+		LRK54_RS08205	0.69	-0.8
1,795,518	+		LRK54_RS08205	0.69	+0.1
1,795,519	-		LRK54_RS08205	0.69	+0.3
1,795,519	-		LRK54_RS08205	0.69	-0.4
1,795,519	-		LRK54_RS08205	0.69	-0.7
1,795,519	-		LRK54_RS08205	0.69	-0.5
1,795,519	-		LRK54_RS08205	0.69	+2.1
1,795,519	-		LRK54_RS08205	0.69	+0.0
1,795,519	-		LRK54_RS08205	0.69	+1.2
1,795,519	-		LRK54_RS08205	0.69	-0.4
1,795,519	-		LRK54_RS08205	0.69	+0.1
1,795,519	-		LRK54_RS08205	0.69	-0.1
1,795,548	+		LRK54_RS08205	0.72	+0.1
1,795,548	+		LRK54_RS08205	0.72	-0.5
1,795,548	+		LRK54_RS08205	0.72	+2.5
1,795,548	+		LRK54_RS08205	0.72	+1.2
1,795,548	+		LRK54_RS08205	0.72	+0.9
1,795,548	+		LRK54_RS08205	0.72	-0.5
1,795,548	+		LRK54_RS08205	0.72	+0.9
1,795,548	+		LRK54_RS08205	0.72	-0.5
1,795,548	+		LRK54_RS08205	0.72	-2.0
1,795,548	+		LRK54_RS08205	0.72	+1.2
1,795,548	+		LRK54_RS08205	0.72	+0.2
1,795,549	-		LRK54_RS08205	0.72	+0.6
1,795,549	-		LRK54_RS08205	0.72	-0.4
1,795,549	-		LRK54_RS08205	0.72	-0.5
1,795,549	-		LRK54_RS08205	0.72	-0.5
1,795,549	-		LRK54_RS08205	0.72	+1.0
1,795,549	-		LRK54_RS08205	0.72	-0.3
1,795,549	-		LRK54_RS08205	0.72	-0.7
1,795,549	-		LRK54_RS08205	0.72	-0.1
1,795,549	-		LRK54_RS08205	0.72	-2.6
1,795,549	-		LRK54_RS08205	0.72	-1.0
1,795,549	-		LRK54_RS08205	0.72	+1.9
1,795,549	-		LRK54_RS08205	0.72	+1.5
1,795,549	-		LRK54_RS08205	0.72	-2.5
1,795,549	-		LRK54_RS08205	0.72	-0.9
1,795,549	-		LRK54_RS08205	0.72	-1.2
1,795,549	-		LRK54_RS08205	0.72	-1.5
1,795,614	+		LRK54_RS08205	0.79	-1.8
1,795,659	+		LRK54_RS08205	0.84	-0.4
1,795,659	+		LRK54_RS08205	0.84	+1.3
1,795,659	+		LRK54_RS08205	0.84	-0.4
1,795,659	+		LRK54_RS08205	0.84	+2.5
1,795,659	+		LRK54_RS08205	0.84	+0.6
1,795,659	+		LRK54_RS08205	0.84	-1.2
1,795,659	+		LRK54_RS08205	0.84	-0.1
1,795,659	+		LRK54_RS08205	0.84	-0.1
1,795,659	+		LRK54_RS08205	0.84	-1.5
1,795,660	+		LRK54_RS08205	0.84	-0.5
1,795,660	-		LRK54_RS08205	0.84	-0.5
1,795,660	-		LRK54_RS08205	0.84	+1.5
1,795,660	-		LRK54_RS08205	0.84	-1.7
1,795,660	-		LRK54_RS08205	0.84	+1.0
1,795,660	-		LRK54_RS08205	0.84	-0.3
1,795,674	+		LRK54_RS08205	0.85	-1.2
1,795,674	+		LRK54_RS08205	0.85	+1.1
1,795,674	+		LRK54_RS08205	0.85	-0.3
1,795,674	+		LRK54_RS08205	0.85	-0.1
1,795,674	+		LRK54_RS08205	0.85	-0.1
1,795,674	+		LRK54_RS08205	0.85	+0.4
1,795,674	+		LRK54_RS08205	0.85	-0.4
1,795,674	+		LRK54_RS08205	0.85	+0.9
1,795,674	+		LRK54_RS08205	0.85	-1.0
1,795,674	+		LRK54_RS08205	0.85	+2.2
1,795,674	+		LRK54_RS08205	0.85	-1.6
1,795,674	+		LRK54_RS08205	0.85	+0.3
1,795,674	+		LRK54_RS08205	0.85	-1.8
1,795,674	+		LRK54_RS08205	0.85	+0.5
1,795,674	+		LRK54_RS08205	0.85	+0.9
1,795,674	+		LRK54_RS08205	0.85	-0.2
1,795,674	+		LRK54_RS08205	0.85	+0.5
1,795,674	+		LRK54_RS08205	0.85	-0.4
1,795,674	+		LRK54_RS08205	0.85	-1.4
1,795,674	+		LRK54_RS08205	0.85	+0.2
1,795,674	+		LRK54_RS08205	0.85	+1.7
1,795,674	+		LRK54_RS08205	0.85	-0.0
1,795,675	-		LRK54_RS08205	0.85	-0.5
1,795,675	-		LRK54_RS08205	0.85	+1.8
1,795,675	-		LRK54_RS08205	0.85	-1.5
1,795,675	-		LRK54_RS08205	0.85	+0.2
1,795,675	-		LRK54_RS08205	0.85	-0.1
1,795,675	-		LRK54_RS08205	0.85	+0.0
1,795,675	-		LRK54_RS08205	0.85	+0.6
1,795,675	-		LRK54_RS08205	0.85	+0.4
1,795,675	-		LRK54_RS08205	0.85	-0.5
1,795,763	+				+0.5
1,795,763	+				-0.5
1,795,763	+				-0.0
1,795,763	+				+1.2
1,795,763	+				-0.3
1,795,763	+				+0.1
1,795,763	+				-0.6
1,795,763	+				-0.6
1,795,763	+				+0.4
1,795,763	+				+0.3
1,795,763	+				-0.9
1,795,763	+				+0.6
1,795,763	+				-1.5
1,795,763	+				+0.0
1,795,763	+				-0.4
1,795,763	+				+0.6
1,795,763	+				+0.6
1,795,764	-				+0.0
1,795,764	-				-1.2
1,795,764	-				-1.0
1,795,764	-				-0.6
1,795,764	-				-0.9
1,795,764	-				+0.2
1,795,764	-				-1.3
1,795,764	-				+3.8
1,795,764	-				+0.0
1,795,764	-				-0.5
1,795,764	-				-0.4
1,795,764	-				-0.3
1,795,764	-				+0.0
1,795,764	-				+1.1
1,795,764	-				+0.8
1,795,764	-				-0.4
1,795,764	-				-0.5
1,795,764	-				+0.2
1,795,764	-				+0.5
1,795,764	-				-2.5
1,795,764	-				-0.1
1,795,764	-				-2.1
1,795,764	-				+0.1
1,795,764	-				-0.8
1,795,764	-				-1.3
1,795,976	+				-1.4
1,795,976	+				-0.1
1,795,976	+				-1.8
1,795,976	+				-0.9
1,795,977	-				-0.1
1,795,977	-				+0.0
1,795,977	-				+1.6
1,795,977	-				-1.4
1,795,977	-				+0.3
1,795,977	-				-0.1
1,795,977	-				-0.2
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1,796,127	+		LRK54_RS08210	0.17	-0.4
1,796,127	+		LRK54_RS08210	0.17	+2.1
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1,796,127	+		LRK54_RS08210	0.17	-2.1
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1,796,523	+		LRK54_RS08210	0.62	-2.1
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1,796,524	-		LRK54_RS08210	0.63	+1.1
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1,796,524	-		LRK54_RS08210	0.63	-2.7
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1,796,640	+		LRK54_RS08210	0.76	-2.1
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1,797,441	-		LRK54_RS08220	0.61	-0.4
1,797,441	-		LRK54_RS08220	0.61	-2.2
1,797,441	-		LRK54_RS08220	0.61	-0.5
1,797,441	-		LRK54_RS08220	0.61	+0.3
1,797,441	-		LRK54_RS08220	0.61	-2.0
1,797,441	-		LRK54_RS08220	0.61	-0.2
1,797,441	-		LRK54_RS08220	0.61	+0.6
1,797,441	-		LRK54_RS08220	0.61	-0.5
1,797,467	+		LRK54_RS08220	0.70	+0.1
1,797,467	+		LRK54_RS08220	0.70	+0.9
1,797,468	-		LRK54_RS08220	0.70	-0.1
1,797,468	-		LRK54_RS08220	0.70	+1.9
1,797,468	-		LRK54_RS08220	0.70	+0.5
1,797,468	-		LRK54_RS08220	0.70	+1.2
1,797,468	-		LRK54_RS08220	0.70	-0.2
1,797,468	-		LRK54_RS08220	0.70	-1.7
1,797,468	-		LRK54_RS08220	0.70	+0.2
1,797,468	-		LRK54_RS08220	0.70	-1.0
1,797,468	-		LRK54_RS08220	0.70	-0.4
1,797,479	+		LRK54_RS08220	0.74	-0.1
1,797,480	-		LRK54_RS08220	0.74	+0.1
1,797,480	-		LRK54_RS08220	0.74	+0.1
1,797,747	+				-1.7
1,797,747	+				-0.7
1,797,747	+				-0.7
1,797,747	+				+0.9
1,797,747	+				+0.3
1,797,747	+				-1.1
1,797,747	+				-0.0
1,797,747	+				-1.1
1,797,747	+				+0.6
1,797,747	+				+0.1
1,797,747	+				-0.1
1,797,747	+				-0.3
1,797,747	+				-0.5
1,797,747	+				-0.4
1,797,747	+				-2.2
1,797,747	+				-0.5
1,797,747	+				-0.7
1,797,748	-				+0.4
1,797,748	-				+0.6
1,797,748	-				-0.6
1,797,748	-				-0.7
1,797,748	-				+0.5
1,797,748	-				-0.7
1,797,748	-				+0.9
1,797,748	-				+0.4
1,797,748	-				+0.3
1,797,748	-				-0.9
1,797,748	-				-0.6
1,797,748	-				+0.9
1,797,748	-				+0.1
1,797,748	-				-0.3
1,797,748	-				+0.5
1,797,748	-				-0.9
1,797,748	-				-1.1
1,797,748	-				+0.3
1,797,748	-				-1.8
1,797,748	-				+0.6
1,797,748	-				+0.5
1,797,748	-				-1.5
1,797,748	-				+0.2
1,797,751	+				-1.0
1,797,751	+				+0.5
1,797,751	+				-0.3
1,797,751	+				-1.2
1,797,752	-				-1.8
1,797,752	-				-0.6
1,797,752	-				-0.1