Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS06735

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
1,447,187	+		LRK54_RS06730	0.27	-2.0
1,447,187	+		LRK54_RS06730	0.27	-1.5
1,447,188	-		LRK54_RS06730	0.28	+0.2
1,447,188	-		LRK54_RS06730	0.28	-2.0
1,447,188	-		LRK54_RS06730	0.28	+0.0
1,447,188	-		LRK54_RS06730	0.28	+1.1
1,447,188	-		LRK54_RS06730	0.28	-0.4
1,447,188	-		LRK54_RS06730	0.28	-0.7
1,447,188	-		LRK54_RS06730	0.28	-1.3
1,447,271	+		LRK54_RS06730	0.34	-0.9
1,447,271	+		LRK54_RS06730	0.34	-0.0
1,447,271	+		LRK54_RS06730	0.34	-0.2
1,447,271	+		LRK54_RS06730	0.34	+0.1
1,447,271	+		LRK54_RS06730	0.34	-0.0
1,447,271	+		LRK54_RS06730	0.34	+2.2
1,447,271	+		LRK54_RS06730	0.34	-1.2
1,447,271	+		LRK54_RS06730	0.34	+0.3
1,447,271	+		LRK54_RS06730	0.34	-0.6
1,447,271	+		LRK54_RS06730	0.34	+0.4
1,447,271	+		LRK54_RS06730	0.34	-0.4
1,447,271	+		LRK54_RS06730	0.34	+0.3
1,447,271	+		LRK54_RS06730	0.34	-1.4
1,447,271	+		LRK54_RS06730	0.34	-0.7
1,447,272	-		LRK54_RS06730	0.34	+1.8
1,447,272	-		LRK54_RS06730	0.34	-1.8
1,447,272	-		LRK54_RS06730	0.34	+0.3
1,447,272	-		LRK54_RS06730	0.34	-0.1
1,447,272	-		LRK54_RS06730	0.34	+0.0
1,447,272	-		LRK54_RS06730	0.34	+0.4
1,447,272	-		LRK54_RS06730	0.34	+2.0
1,447,272	-		LRK54_RS06730	0.34	-0.9
1,447,272	-		LRK54_RS06730	0.34	-0.2
1,447,272	-		LRK54_RS06730	0.34	+0.6
1,447,272	-		LRK54_RS06730	0.34	+1.5
1,447,272	-		LRK54_RS06730	0.34	+0.1
1,447,280	+		LRK54_RS06730	0.35	-0.3
1,447,280	+		LRK54_RS06730	0.35	+1.1
1,447,280	+		LRK54_RS06730	0.35	+0.1
1,447,280	+		LRK54_RS06730	0.35	+0.4
1,447,280	+		LRK54_RS06730	0.35	+0.6
1,447,280	+		LRK54_RS06730	0.35	-3.1
1,447,280	+		LRK54_RS06730	0.35	-0.9
1,447,280	+		LRK54_RS06730	0.35	+0.4
1,447,280	+		LRK54_RS06730	0.35	-2.0
1,447,280	+		LRK54_RS06730	0.35	-0.2
1,447,280	+		LRK54_RS06730	0.35	+0.5
1,447,280	+		LRK54_RS06730	0.35	+0.0
1,447,280	+		LRK54_RS06730	0.35	+0.4
1,447,280	+		LRK54_RS06730	0.35	-1.8
1,447,280	+		LRK54_RS06730	0.35	-0.2
1,447,280	+		LRK54_RS06730	0.35	-1.2
1,447,280	+		LRK54_RS06730	0.35	+0.8
1,447,280	+		LRK54_RS06730	0.35	+2.6
1,447,280	+		LRK54_RS06730	0.35	-0.6
1,447,280	+		LRK54_RS06730	0.35	-1.4
1,447,280	+		LRK54_RS06730	0.35	+0.7
1,447,280	+		LRK54_RS06730	0.35	+0.5
1,447,280	+		LRK54_RS06730	0.35	-0.7
1,447,280	+		LRK54_RS06730	0.35	-1.0
1,447,280	+		LRK54_RS06730	0.35	-0.7
1,447,280	+		LRK54_RS06730	0.35	+0.1
1,447,280	+		LRK54_RS06730	0.35	-0.6
1,447,280	+		LRK54_RS06730	0.35	+0.6
1,447,280	+		LRK54_RS06730	0.35	+0.3
1,447,280	+		LRK54_RS06730	0.35	+0.3
1,447,280	+		LRK54_RS06730	0.35	-0.7
1,447,280	+		LRK54_RS06730	0.35	-0.9
1,447,280	+		LRK54_RS06730	0.35	-0.2
1,447,280	+		LRK54_RS06730	0.35	+0.1
1,447,280	+		LRK54_RS06730	0.35	-0.2
1,447,281	-		LRK54_RS06730	0.35	-0.0
1,447,281	-		LRK54_RS06730	0.35	+0.3
1,447,281	-		LRK54_RS06730	0.35	-3.1
1,447,281	-		LRK54_RS06730	0.35	-0.9
1,447,281	-		LRK54_RS06730	0.35	-0.2
1,447,281	-		LRK54_RS06730	0.35	-0.1
1,447,281	-		LRK54_RS06730	0.35	+0.4
1,447,281	-		LRK54_RS06730	0.35	+0.2
1,447,281	-		LRK54_RS06730	0.35	+0.3
1,447,281	-		LRK54_RS06730	0.35	-0.2
1,447,281	-		LRK54_RS06730	0.35	+1.6
1,447,281	-		LRK54_RS06730	0.35	+1.8
1,447,281	-		LRK54_RS06730	0.35	-0.4
1,447,281	-		LRK54_RS06730	0.35	-0.1
1,447,281	-		LRK54_RS06730	0.35	-0.8
1,447,281	-		LRK54_RS06730	0.35	+0.3
1,447,281	-		LRK54_RS06730	0.35	-0.6
1,447,281	-		LRK54_RS06730	0.35	-0.1
1,447,281	-		LRK54_RS06730	0.35	-0.2
1,447,281	-		LRK54_RS06730	0.35	-0.4
1,447,281	-		LRK54_RS06730	0.35	-1.0
1,447,281	-		LRK54_RS06730	0.35	-1.2
1,447,281	-		LRK54_RS06730	0.35	-0.2
1,447,281	-		LRK54_RS06730	0.35	-2.8
1,447,281	-		LRK54_RS06730	0.35	+0.1
1,447,289	+		LRK54_RS06730	0.36	-2.2
1,447,289	+		LRK54_RS06730	0.36	-0.5
1,447,289	+		LRK54_RS06730	0.36	+0.4
1,447,289	+		LRK54_RS06730	0.36	-0.4
1,447,289	+		LRK54_RS06730	0.36	+0.5
1,447,289	+		LRK54_RS06730	0.36	-0.2
1,447,289	+		LRK54_RS06730	0.36	+0.2
1,447,289	+		LRK54_RS06730	0.36	-0.2
1,447,289	+		LRK54_RS06730	0.36	-0.7
1,447,289	+		LRK54_RS06730	0.36	-2.2
1,447,289	+		LRK54_RS06730	0.36	+0.8
1,447,289	+		LRK54_RS06730	0.36	-0.6
1,447,289	+		LRK54_RS06730	0.36	-1.9
1,447,289	+		LRK54_RS06730	0.36	-0.6
1,447,289	+		LRK54_RS06730	0.36	+0.8
1,447,289	+		LRK54_RS06730	0.36	-0.2
1,447,289	+		LRK54_RS06730	0.36	-0.6
1,447,289	+		LRK54_RS06730	0.36	+0.4
1,447,289	+		LRK54_RS06730	0.36	+1.9
1,447,290	-		LRK54_RS06730	0.36	+0.1
1,447,290	-		LRK54_RS06730	0.36	+0.2
1,447,290	-		LRK54_RS06730	0.36	+0.8
1,447,290	-		LRK54_RS06730	0.36	+0.6
1,447,290	-		LRK54_RS06730	0.36	+0.0
1,447,290	-		LRK54_RS06730	0.36	+0.3
1,447,290	-		LRK54_RS06730	0.36	-0.9
1,447,290	-		LRK54_RS06730	0.36	+0.2
1,447,290	-		LRK54_RS06730	0.36	-0.1
1,447,290	-		LRK54_RS06730	0.36	+0.4
1,447,290	-		LRK54_RS06730	0.36	-2.9
1,447,290	-		LRK54_RS06730	0.36	+0.6
1,447,290	-		LRK54_RS06730	0.36	+0.8
1,447,340	+		LRK54_RS06730	0.40	-0.3
1,447,340	+		LRK54_RS06730	0.40	-0.2
1,447,772	+		LRK54_RS06730	0.74	+0.1
1,447,772	+		LRK54_RS06730	0.74	+1.3
1,447,773	-		LRK54_RS06730	0.74	+1.0
1,447,892	+		LRK54_RS06730	0.83	+0.7
1,447,904	+		LRK54_RS06730	0.84	-0.4
1,447,904	+		LRK54_RS06730	0.84	+0.5
1,447,904	+		LRK54_RS06730	0.84	-0.2
1,447,904	+		LRK54_RS06730	0.84	+0.8
1,447,904	+		LRK54_RS06730	0.84	+1.8
1,447,904	+		LRK54_RS06730	0.84	-0.5
1,447,904	+				+1.4
1,447,904	+		LRK54_RS06730	0.84	-0.2
1,447,904	+		LRK54_RS06730	0.84	+0.3
1,447,904	+		LRK54_RS06730	0.84	+0.1
1,447,904	+		LRK54_RS06730	0.84	+0.8
1,447,904	+		LRK54_RS06730	0.84	+1.3
1,447,904	+		LRK54_RS06730	0.84	-1.2
1,447,905	-		LRK54_RS06730	0.84	+0.1
1,447,905	-		LRK54_RS06730	0.84	+0.4
1,447,905	-		LRK54_RS06730	0.84	-0.2
1,447,905	-		LRK54_RS06730	0.84	-0.2
1,447,905	-		LRK54_RS06730	0.84	-0.3
1,447,905	-		LRK54_RS06730	0.84	-1.4
1,447,905	-		LRK54_RS06730	0.84	-0.8
1,447,905	-		LRK54_RS06730	0.84	+0.7
1,447,905	-		LRK54_RS06730	0.84	+0.1
1,447,905	-		LRK54_RS06730	0.84	+0.9
1,447,905	-		LRK54_RS06730	0.84	+2.4
1,447,905	-		LRK54_RS06730	0.84	+0.4
1,447,905	-		LRK54_RS06730	0.84	+0.6
1,447,905	-		LRK54_RS06730	0.84	+0.2
1,447,905	-		LRK54_RS06730	0.84	+0.8
1,447,905	-		LRK54_RS06730	0.84	+0.6
1,447,905	-		LRK54_RS06730	0.84	+1.1
1,447,905	-		LRK54_RS06730	0.84	+1.2
1,447,955	+		LRK54_RS06730	0.88	-0.8
1,447,955	+		LRK54_RS06730	0.88	-0.1
1,447,956	-		LRK54_RS06730	0.88	+0.9
1,447,956	-		LRK54_RS06730	0.88	-1.4
1,447,956	-		LRK54_RS06730	0.88	+0.3
1,447,956	-		LRK54_RS06730	0.88	-0.6
1,447,964	+		LRK54_RS06730	0.89	+0.8
1,447,964	+		LRK54_RS06730	0.89	-1.8
1,447,964	+		LRK54_RS06730	0.89	-0.4
1,447,964	+		LRK54_RS06730	0.89	-0.4
1,447,964	+		LRK54_RS06730	0.89	-0.6
1,447,964	+		LRK54_RS06730	0.89	-0.6
1,447,964	+				+4.4
1,447,964	+		LRK54_RS06730	0.89	+1.2
1,447,964	+		LRK54_RS06730	0.89	+0.9
1,447,965	-		LRK54_RS06730	0.89	-0.4
1,447,965	-		LRK54_RS06730	0.89	+3.2
1,447,965	-		LRK54_RS06730	0.89	+0.0
1,447,965	-		LRK54_RS06730	0.89	+0.6
1,447,965	-		LRK54_RS06730	0.89	-0.8
1,447,965	-		LRK54_RS06730	0.89	+1.4
1,447,965	-		LRK54_RS06730	0.89	+1.8
1,448,174	+				-0.1
1,448,174	+				-1.4
1,448,174	+				-0.4
1,448,174	+				-0.1
1,448,174	+				+1.2
1,448,174	+				+0.1
1,448,174	+				-1.4
1,448,174	+				-0.2
1,448,174	+				-0.5
1,448,174	+				-1.3
1,448,174	+				-0.9
1,448,174	+				+0.4
1,448,174	+				-0.7
1,448,174	+				-1.1
1,448,174	+				+0.8
1,448,174	+				-0.4
1,448,174	+				+1.0
1,448,174	+				+0.2
1,448,174	+				+0.4
1,448,174	+				-1.6
1,448,174	+				+0.8
1,448,174	+				-1.3
1,448,174	+				+0.8
1,448,174	+				+0.8
1,448,174	+				-0.2
1,448,174	+				-0.2
1,448,174	+				-0.4
1,448,174	+				+0.9
1,448,175	-				-1.3
1,448,175	-				-0.4
1,448,175	-				+2.0
1,448,175	-				+0.9
1,448,175	-				-2.4
1,448,175	-				+0.2
1,448,175	-				-0.3
1,448,175	-				+0.5
1,448,175	-				+1.4
1,448,175	-				-1.1
1,448,175	-				-0.6
1,448,175	-				-1.8
1,448,175	-				-0.4
1,448,175	-				-0.0
1,448,175	-				-1.2
1,448,175	-				-0.5
1,448,175	-				-0.9
1,448,175	-				-0.9
1,448,175	-				-0.6
1,448,175	-				+0.4
1,448,175	-				-1.8
1,448,175	-				-1.4
1,448,175	-				-0.4
1,448,175	-				+0.6
1,448,175	-				+0.1
1,448,175	-				-0.8
1,448,252	+		LRK54_RS06735	0.13	-1.0
1,448,252	+		LRK54_RS06735	0.13	-0.9
1,448,252	+		LRK54_RS06735	0.13	+0.0
1,448,252	+		LRK54_RS06735	0.13	-1.4
1,448,252	+		LRK54_RS06735	0.13	-0.3
1,448,252	+		LRK54_RS06735	0.13	-0.2
1,448,252	+		LRK54_RS06735	0.13	+1.0
1,448,252	+		LRK54_RS06735	0.13	-1.5
1,448,252	+		LRK54_RS06735	0.13	+2.1
1,448,253	-		LRK54_RS06735	0.13	-0.6
1,448,253	-		LRK54_RS06735	0.13	-1.0
1,448,253	-		LRK54_RS06735	0.13	+2.4
1,448,253	-		LRK54_RS06735	0.13	-0.2
1,448,253	-		LRK54_RS06735	0.13	-1.7
1,448,253	-		LRK54_RS06735	0.13	-0.4
1,448,465	+		LRK54_RS06735	0.49	+1.5
1,448,465	+		LRK54_RS06735	0.49	+0.3
1,448,465	+		LRK54_RS06735	0.49	-2.8
1,448,465	+		LRK54_RS06735	0.49	+0.1
1,448,465	+		LRK54_RS06735	0.49	-0.4
1,448,466	-		LRK54_RS06735	0.49	-0.5
1,448,466	-		LRK54_RS06735	0.49	+0.1
1,448,466	-		LRK54_RS06735	0.49	-1.0
1,448,466	-		LRK54_RS06735	0.49	-1.4
1,448,466	-		LRK54_RS06735	0.49	+0.9
1,448,466	-		LRK54_RS06735	0.49	+0.8
1,448,466	-		LRK54_RS06735	0.49	-0.3
1,448,466	-		LRK54_RS06735	0.49	+0.8
1,448,637	-		LRK54_RS06735	0.78	-0.3
1,448,637	-		LRK54_RS06735	0.78	+0.4
1,448,690	+		LRK54_RS06735	0.87	-1.4
1,448,690	+		LRK54_RS06735	0.87	-0.1
1,448,690	+		LRK54_RS06735	0.87	+0.1
1,448,690	+		LRK54_RS06735	0.87	-0.4
1,448,690	+		LRK54_RS06735	0.87	-1.3
1,448,690	+		LRK54_RS06735	0.87	+2.2
1,448,690	+		LRK54_RS06735	0.87	+0.7
1,448,690	+		LRK54_RS06735	0.87	-1.3
1,448,690	+		LRK54_RS06735	0.87	+0.1
1,448,690	+		LRK54_RS06735	0.87	-0.8
1,448,690	+		LRK54_RS06735	0.87	-1.6
1,448,690	+		LRK54_RS06735	0.87	-0.5
1,448,690	+		LRK54_RS06735	0.87	+1.7
1,448,690	+		LRK54_RS06735	0.87	+0.8
1,448,690	+		LRK54_RS06735	0.87	-0.6
1,448,690	+		LRK54_RS06735	0.87	+0.4
1,448,690	+		LRK54_RS06735	0.87	+0.5
1,448,690	+		LRK54_RS06735	0.87	-0.4
1,448,690	+		LRK54_RS06735	0.87	+0.3
1,448,690	+		LRK54_RS06735	0.87	-1.2
1,448,690	+		LRK54_RS06735	0.87	-0.5
1,448,690	+		LRK54_RS06735	0.87	+1.4
1,448,690	+		LRK54_RS06735	0.87	+1.8
1,448,690	+		LRK54_RS06735	0.87	+0.7
1,448,690	+		LRK54_RS06735	0.87	-0.1
1,448,691	-		LRK54_RS06735	0.87	-0.1
1,448,691	-		LRK54_RS06735	0.87	+1.0
1,448,691	-		LRK54_RS06735	0.87	-1.0
1,448,691	-		LRK54_RS06735	0.87	+1.2
1,448,691	-		LRK54_RS06735	0.87	-0.7
1,448,691	-		LRK54_RS06735	0.87	+0.3
1,448,691	-		LRK54_RS06735	0.87	-0.6
1,448,691	-		LRK54_RS06735	0.87	+0.7
1,448,691	-		LRK54_RS06735	0.87	-1.1
1,448,691	-		LRK54_RS06735	0.87	-0.3
1,448,691	-		LRK54_RS06735	0.87	-0.6
1,448,691	-		LRK54_RS06735	0.87	-0.3
1,448,691	-		LRK54_RS06735	0.87	-1.4
1,448,691	-		LRK54_RS06735	0.87	-0.1
1,448,691	-		LRK54_RS06735	0.87	-1.4
1,448,691	-		LRK54_RS06735	0.87	-1.0
1,448,691	-		LRK54_RS06735	0.87	+1.4
1,448,691	-		LRK54_RS06735	0.87	-0.3
1,448,691	-		LRK54_RS06735	0.87	-0.0
1,448,691	-		LRK54_RS06735	0.87	-0.8
1,448,691	-		LRK54_RS06735	0.87	-1.9
1,448,691	-		LRK54_RS06735	0.87	+1.1
1,448,691	-		LRK54_RS06735	0.87	-0.4
1,448,691	-		LRK54_RS06735	0.87	-0.4
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