Strain Fitness in Pantoea sp. MT58 around IAI47_08345

Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
1,765,904	+		IAI47_08335	0.61	+0.9
1,765,904	+		IAI47_08335	0.61	-1.2
1,765,904	+		IAI47_08335	0.61	-2.3
1,765,904	+		IAI47_08335	0.61	-0.1
1,765,905	-		IAI47_08335	0.61	-0.1
1,765,905	-		IAI47_08335	0.61	-0.5
1,765,983	+		IAI47_08335	0.81	+1.6
1,765,984	-		IAI47_08335	0.81	+0.2
1,765,984	-		IAI47_08335	0.81	-1.8
1,765,984	-		IAI47_08335	0.81	-0.1
1,765,987	+		IAI47_08335	0.82	-0.4
1,765,987	+		IAI47_08335	0.82	-1.4
1,765,988	-		IAI47_08335	0.82	-1.4
1,765,988	-		IAI47_08335	0.82	-1.3
1,765,988	-		IAI47_08335	0.82	+0.2
1,765,988	-		IAI47_08335	0.82	+0.5
1,765,988	-		IAI47_08335	0.82	-1.2
1,765,988	-		IAI47_08335	0.82	-1.4
1,766,055	+				-1.2
1,766,055	+				-0.1
1,766,055	+				+0.2
1,766,055	+				-0.6
1,766,055	+				-0.3
1,766,055	+				+0.1
1,766,056	-				+2.2
1,766,056	-				+0.1
1,766,056	-				-0.2
1,766,056	-				-1.0
1,766,056	-				+0.2
1,766,056	-				-0.4
1,766,056	-				-0.1
1,766,056	-				-1.8
1,766,123	+				+0.5
1,766,123	+				-0.5
1,766,123	+				-0.8
1,766,123	+				+0.0
1,766,232	+		IAI47_08340	0.26	-0.9
1,766,232	+		IAI47_08340	0.26	-0.1
1,766,232	+		IAI47_08340	0.26	-1.2
1,766,232	+		IAI47_08340	0.26	+0.1
1,766,232	+		IAI47_08340	0.26	+0.6
1,766,232	+		IAI47_08340	0.26	-0.7
1,766,233	-		IAI47_08340	0.26	+0.0
1,766,233	-		IAI47_08340	0.26	+0.2
1,766,233	-		IAI47_08340	0.26	-0.9
1,766,233	-		IAI47_08340	0.26	-0.3
1,766,233	-		IAI47_08340	0.26	-0.8
1,766,233	-		IAI47_08340	0.26	-0.3
1,766,233	-		IAI47_08340	0.26	-0.6
1,766,516	+		IAI47_08340	0.70	-0.2
1,766,516	+		IAI47_08340	0.70	+0.9
1,766,516	+		IAI47_08340	0.70	-0.5
1,766,516	+		IAI47_08340	0.70	-1.4
1,766,516	+		IAI47_08340	0.70	-0.1
1,766,516	+		IAI47_08340	0.70	-0.3
1,766,516	+		IAI47_08340	0.70	-0.9
1,766,517	-		IAI47_08340	0.70	-1.0
1,766,517	-		IAI47_08340	0.70	+0.3
1,766,517	-		IAI47_08340	0.70	-0.7
1,766,517	-		IAI47_08340	0.70	+1.7
1,766,517	-		IAI47_08340	0.70	+0.3
1,766,698	+				+2.9
1,766,699	-				-0.6
1,766,706	+				+0.9
1,766,706	+				-0.4
1,766,707	-				+0.7
1,766,707	-				+0.3
1,766,744	+				-0.4
1,766,744	+				+0.3
1,766,744	+				+0.5
1,766,744	+				-1.2
1,766,744	+				+0.5
1,766,745	-				-0.4
1,766,745	-				-0.1
1,766,747	+				-1.6
1,766,747	+				+0.3
1,766,747	+				+1.8
1,766,747	+				-1.1
1,766,748	-				-0.5
1,766,748	-				+1.1
1,766,749	+				+0.7
1,766,749	+				-0.7
1,766,752	+				+0.1
1,766,752	+				-2.1
1,766,753	-				-0.8
1,766,753	-				+1.3
1,766,753	-				+0.1
1,766,753	-				-1.1
1,766,753	-				-1.7
1,766,829	+				-1.7
1,766,829	+				-0.5
1,766,829	+				+1.0
1,766,829	+				+1.8
1,766,829	+				-1.1
1,766,829	+				+0.0
1,766,830	-				-1.0
1,766,830	-				-0.2
1,766,845	+				+0.3
1,766,846	-				-0.4
1,766,846	-				-1.1
1,766,846	-				+0.2
1,766,864	+				+0.8
1,766,864	+				+3.4
1,766,864	+				+0.7
1,766,864	+				+1.2
1,766,864	+				-1.3
1,766,864	+				+1.2
1,766,864	+				+0.1
1,766,865	-				+0.3
1,766,865	-				-1.5
1,766,865	-				+0.2
1,766,865	-				+0.2
1,766,865	-				+0.4
1,766,865	-				+0.3
1,766,865	-				+0.3
1,766,865	-				+0.1
1,766,906	-				+0.4
1,767,000	+				-0.5
1,767,000	+				+0.3
1,767,147	+		IAI47_08345	0.22	+0.1
1,767,148	-		IAI47_08345	0.22	-0.3
1,767,218	-		IAI47_08345	0.28	-2.4
1,767,218	-		IAI47_08345	0.28	-0.3
1,767,295	+		IAI47_08345	0.35	-0.4
1,767,296	-		IAI47_08345	0.35	+1.3
1,767,334	+		IAI47_08345	0.38	-0.8
1,767,334	+		IAI47_08345	0.38	+0.6
1,767,335	-		IAI47_08345	0.38	+0.7
1,767,341	-		IAI47_08345	0.39	+0.1
1,767,341	-		IAI47_08345	0.39	+0.4
1,767,353	-		IAI47_08345	0.40	-2.2
1,767,353	-		IAI47_08345	0.40	+0.7
1,767,380	+		IAI47_08345	0.42	+0.3
1,767,380	+		IAI47_08345	0.42	+1.5
1,767,380	+		IAI47_08345	0.42	-0.1
1,767,380	+		IAI47_08345	0.42	+0.5
1,767,381	-		IAI47_08345	0.42	-0.5
1,767,381	-		IAI47_08345	0.42	-0.2
1,767,381	-		IAI47_08345	0.42	-0.2
1,767,513	-		IAI47_08345	0.54	-1.7
1,767,513	-		IAI47_08345	0.54	-0.6
1,767,513	-		IAI47_08345	0.54	+0.1
1,767,533	+		IAI47_08345	0.55	-0.2
1,767,586	+		IAI47_08345	0.60	-0.0
1,767,586	+		IAI47_08345	0.60	+1.9
1,767,586	+		IAI47_08345	0.60	-0.1
1,767,586	+		IAI47_08345	0.60	-0.9
1,767,586	+		IAI47_08345	0.60	-0.0
1,767,586	+		IAI47_08345	0.60	+0.1
1,767,587	-		IAI47_08345	0.60	+0.6
1,767,587	-		IAI47_08345	0.60	+1.6
1,767,587	-		IAI47_08345	0.60	+0.1
1,767,587	-		IAI47_08345	0.60	+0.5
1,767,587	-		IAI47_08345	0.60	-1.0
1,767,587	-		IAI47_08345	0.60	-0.0
1,767,587	-		IAI47_08345	0.60	+0.4
1,767,587	-		IAI47_08345	0.60	+1.8
1,767,587	-		IAI47_08345	0.60	+1.7
1,767,587	-		IAI47_08345	0.60	+0.7
1,767,587	-		IAI47_08345	0.60	+0.3
1,767,587	-		IAI47_08345	0.60	-0.7
1,767,613	+		IAI47_08345	0.62	-0.2
1,767,613	+		IAI47_08345	0.62	-0.2
1,767,613	+		IAI47_08345	0.62	+2.3
1,767,710	+		IAI47_08345	0.71	-0.7
1,767,710	+		IAI47_08345	0.71	+1.2
1,767,711	-		IAI47_08345	0.71	+0.4
1,767,711	-		IAI47_08345	0.71	-0.3
1,767,728	+		IAI47_08345	0.72	+0.6
1,767,728	+		IAI47_08345	0.72	-0.0
1,767,728	+		IAI47_08345	0.72	+0.5
1,767,728	+		IAI47_08345	0.72	-0.8
1,767,728	+		IAI47_08345	0.72	-2.2
1,767,729	-		IAI47_08345	0.72	+0.0
1,767,729	-		IAI47_08345	0.72	-0.7
1,767,729	-		IAI47_08345	0.72	+0.9
1,767,858	+		IAI47_08345	0.84	-1.0
1,767,858	+		IAI47_08345	0.84	-1.3
1,767,858	+		IAI47_08345	0.84	+1.3
1,767,858	+		IAI47_08345	0.84	+0.1
1,767,859	-		IAI47_08345	0.84	-0.7
1,767,859	-		IAI47_08345	0.84	-0.3
1,767,859	-		IAI47_08345	0.84	-0.8
1,767,860	+		IAI47_08345	0.84	+0.9
1,767,860	+		IAI47_08345	0.84	-0.0
1,767,860	+		IAI47_08345	0.84	-0.7
1,767,860	+		IAI47_08345	0.84	-1.0
1,767,860	+		IAI47_08345	0.84	-1.0
1,767,860	+		IAI47_08345	0.84	-0.0
1,767,860	+		IAI47_08345	0.84	-0.2
1,767,861	-		IAI47_08345	0.84	-0.3
1,767,861	-		IAI47_08345	0.84	-0.5
1,767,861	-		IAI47_08345	0.84	-1.0
1,767,861	-		IAI47_08345	0.84	+0.6
1,767,861	-		IAI47_08345	0.84	+0.3
1,767,902	+		IAI47_08345	0.87	+1.4
1,767,902	+		IAI47_08345	0.87	-0.0
1,767,902	+		IAI47_08345	0.87	+0.3
1,767,902	+		IAI47_08345	0.87	+0.1
1,767,903	-		IAI47_08345	0.88	-0.1
1,767,903	-		IAI47_08345	0.88	-0.7
1,767,903	-		IAI47_08345	0.88	-1.0
1,767,903	-		IAI47_08345	0.88	-0.1
1,767,903	-		IAI47_08345	0.88	+1.2
1,767,903	-		IAI47_08345	0.88	-1.0
1,768,044	-				-0.4
1,768,046	+				-0.1
1,768,046	+				+0.2
1,768,046	+				+0.3
1,768,047	-				-1.0
1,768,064	-				+0.5
1,768,064	-				+0.7
1,768,069	+				+1.9
1,768,079	+				-0.0
1,768,085	+				-0.3
1,768,085	+				+1.2
1,768,085	+				-0.1
1,768,085	+				-0.3
1,768,086	-				-0.9
1,768,086	-				+0.3
1,768,086	-				+0.7
1,768,086	-				-0.3
1,768,099	+				+1.0
1,768,099	+				+0.3
1,768,099	+				+0.5
1,768,099	+				-0.0
1,768,115	-				+3.8
1,768,163	+				-0.0
1,768,164	-				-0.5
1,768,164	-				-0.1
1,768,187	+				+0.9
1,768,187	+				-0.2
1,768,187	+				+0.0
1,768,188	-				-0.0
1,768,188	-				-1.0
1,768,320	-		IAI47_08350	0.13	-0.9
1,768,427	+		IAI47_08350	0.19	+0.3
1,768,427	+		IAI47_08350	0.19	-0.9
1,768,427	+		IAI47_08350	0.19	+0.5
1,768,428	-		IAI47_08350	0.19	-0.6
1,768,451	+		IAI47_08350	0.20	+0.3
1,768,451	+		IAI47_08350	0.20	-1.6
1,768,452	-		IAI47_08350	0.20	-1.0
1,768,452	-		IAI47_08350	0.20	-0.5
1,768,452	-		IAI47_08350	0.20	-0.0
1,768,452	-		IAI47_08350	0.20	-0.1
1,768,457	+		IAI47_08350	0.20	-0.8
1,768,458	-		IAI47_08350	0.20	-1.5
1,768,479	-		IAI47_08350	0.21	+1.9
1,768,523	+		IAI47_08350	0.23	-0.2
1,768,620	+				+1.9
1,768,620	+		IAI47_08350	0.28	-1.3
1,768,620	+		IAI47_08350	0.28	-0.2
1,768,643	+		IAI47_08350	0.29	-0.2
1,768,733	+		IAI47_08350	0.33	-1.4
1,768,761	+		IAI47_08350	0.35	-0.2
1,768,761	+		IAI47_08350	0.35	+1.2
1,768,761	+		IAI47_08350	0.35	+0.6
1,768,762	-		IAI47_08350	0.35	+0.8
1,768,762	-		IAI47_08350	0.35	-0.7
1,768,762	-		IAI47_08350	0.35	+1.5
1,768,762	-		IAI47_08350	0.35	-0.5
1,768,763	+		IAI47_08350	0.35	+0.2
1,768,814	+		IAI47_08350	0.37	-0.3
1,768,815	-		IAI47_08350	0.37	+0.5
1,768,815	-		IAI47_08350	0.37	-0.2
1,768,836	-		IAI47_08350	0.38	+0.2
1,768,910	-		IAI47_08350	0.42	-0.1
1,768,964	+		IAI47_08350	0.44	-1.5
1,768,965	-		IAI47_08350	0.44	-0.1
1,768,973	-		IAI47_08350	0.45	-1.6
1,768,997	-		IAI47_08350	0.46	-2.3