Strain Fitness in Pantoea sp. MT58 around IAI47_08015

Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
1,691,790	-		IAI47_08005	0.73	+1.0
1,691,816	-		IAI47_08005	0.75	+0.3
1,691,842	+		IAI47_08005	0.77	-1.0
1,691,842	+		IAI47_08005	0.77	+1.0
1,691,845	+		IAI47_08005	0.77	-1.4
1,691,846	-		IAI47_08005	0.77	+1.2
1,691,857	+		IAI47_08005	0.78	-0.2
1,692,091	+				+0.0
1,692,092	-				+1.0
1,692,112	+				-1.1
1,692,112	+				-0.1
1,692,112	+				+0.1
1,692,112	+				-1.4
1,692,113	-				+0.7
1,692,113	-				+1.1
1,692,113	-				+0.4
1,692,124	+				-2.2
1,692,125	-				+1.1
1,692,125	-				-0.5
1,692,203	-		IAI47_08010	0.17	+1.0
1,692,240	-		IAI47_08010	0.25	-0.2
1,692,240	-		IAI47_08010	0.25	+1.6
1,692,240	-		IAI47_08010	0.25	+0.7
1,692,306	+		IAI47_08010	0.40	+0.6
1,692,306	+		IAI47_08010	0.40	+0.4
1,692,307	-		IAI47_08010	0.41	+0.7
1,692,318	+		IAI47_08010	0.43	+1.2
1,692,319	-		IAI47_08010	0.43	-1.4
1,692,354	+		IAI47_08010	0.51	+0.3
1,692,354	+		IAI47_08010	0.51	-0.7
1,692,365	+		IAI47_08010	0.54	-1.0
1,692,366	-		IAI47_08010	0.54	+1.4
1,692,366	-		IAI47_08010	0.54	+0.4
1,692,366	-		IAI47_08010	0.54	+0.7
1,692,366	-		IAI47_08010	0.54	+0.3
1,692,402	+		IAI47_08010	0.62	-1.3
1,692,402	+		IAI47_08010	0.62	-0.5
1,692,402	+		IAI47_08010	0.62	-0.2
1,692,402	+		IAI47_08010	0.62	+2.3
1,692,403	-		IAI47_08010	0.62	+1.7
1,692,403	-		IAI47_08010	0.62	+0.2
1,692,403	-		IAI47_08010	0.62	+1.3
1,692,403	-		IAI47_08010	0.62	+1.2
1,692,425	+		IAI47_08010	0.67	-2.4
1,692,437	+		IAI47_08010	0.70	-1.3
1,692,500	+		IAI47_08010	0.84	-0.9
1,692,500	+		IAI47_08010	0.84	-1.6
1,692,500	+		IAI47_08010	0.84	-0.1
1,692,500	+		IAI47_08010	0.84	-1.9
1,692,501	-		IAI47_08010	0.84	-0.2
1,692,501	-		IAI47_08010	0.84	+2.2
1,692,501	-		IAI47_08010	0.84	-0.1
1,692,501	-		IAI47_08010	0.84	+0.4
1,692,501	-		IAI47_08010	0.84	+1.4
1,692,501	-		IAI47_08010	0.84	+0.7
1,692,546	+				-1.6
1,692,546	+				+1.2
1,692,547	-				+0.2
1,692,547	-				+1.8
1,692,547	-				+2.0
1,692,577	+				-0.4
1,692,578	-				+0.4
1,692,587	+				-0.7
1,692,587	+				-0.3
1,692,588	-				+0.6
1,692,588	-				+0.9
1,692,588	-				+0.6
1,692,639	+				-0.8
1,692,706	+				-0.8
1,692,735	+		IAI47_08015	0.11	-2.5
1,692,736	-		IAI47_08015	0.11	-0.7
1,692,736	-		IAI47_08015	0.11	+0.6
1,692,736	-		IAI47_08015	0.11	-0.0
1,692,736	-		IAI47_08015	0.11	-0.2
1,692,790	+		IAI47_08015	0.15	+1.4
1,692,811	-		IAI47_08015	0.16	+0.2
1,692,811	-		IAI47_08015	0.16	+1.0
1,692,811	-		IAI47_08015	0.16	+0.2
1,692,985	+		IAI47_08015	0.29	-1.6
1,692,986	-		IAI47_08015	0.29	+0.5
1,692,986	-		IAI47_08015	0.29	+2.8
1,692,986	-		IAI47_08015	0.29	+2.0
1,692,986	-		IAI47_08015	0.29	+1.2
1,692,988	-		IAI47_08015	0.29	-1.0
1,692,988	-		IAI47_08015	0.29	+0.4
1,692,988	-		IAI47_08015	0.29	+0.8
1,692,988	-		IAI47_08015	0.29	+2.0
1,692,988	-		IAI47_08015	0.29	+0.6
1,693,153	+		IAI47_08015	0.41	-2.2
1,693,209	+		IAI47_08015	0.45	-0.3
1,693,209	+		IAI47_08015	0.45	-0.6
1,693,226	-		IAI47_08015	0.46	+0.6
1,693,226	-		IAI47_08015	0.46	-1.6
1,693,355	+		IAI47_08015	0.56	-0.5
1,693,356	-		IAI47_08015	0.56	-0.5
1,693,371	+		IAI47_08015	0.57	-0.5
1,693,371	+		IAI47_08015	0.57	+0.4
1,693,403	-		IAI47_08015	0.59	+0.2
1,693,432	+		IAI47_08015	0.61	-3.1
1,693,432	+		IAI47_08015	0.61	-1.6
1,693,432	+		IAI47_08015	0.61	+0.3
1,693,432	+		IAI47_08015	0.61	-2.0
1,693,432	+		IAI47_08015	0.61	-0.7
1,693,432	+		IAI47_08015	0.61	+1.0
1,693,433	-		IAI47_08015	0.61	+1.9
1,693,433	-		IAI47_08015	0.61	+2.9
1,693,433	-		IAI47_08015	0.61	+1.3
1,693,433	-		IAI47_08015	0.61	-0.8
1,693,433	-		IAI47_08015	0.61	+1.1
1,693,433	-		IAI47_08015	0.61	+0.4
1,693,465	+		IAI47_08015	0.64	-0.6
1,693,465	+		IAI47_08015	0.64	-1.4
1,693,466	-		IAI47_08015	0.64	+0.2
1,693,466	-		IAI47_08015	0.64	+0.0
1,693,507	+		IAI47_08015	0.67	-1.7
1,693,508	-		IAI47_08015	0.67	-0.0
1,693,677	+		IAI47_08015	0.79	-1.6
1,693,678	-		IAI47_08015	0.79	-0.2
1,693,678	-		IAI47_08015	0.79	-0.8
1,693,694	+		IAI47_08015	0.81	-0.3
1,693,829	+				-0.6
1,693,829	+				-0.3
1,693,830	-				+0.3
1,693,830	-				+0.0
1,693,830	-				+1.3
1,693,830	-				+1.0
1,693,933	+				-0.0
1,693,933	+				-0.8
1,693,933	+				+0.9
1,693,934	-				+1.1
1,693,934	-				+1.0
1,693,934	-				+0.2
1,693,934	-				+0.2
1,693,934	-				+1.8
1,693,962	-				+0.1
1,693,962	-				-0.2
1,694,130	+		IAI47_08020	0.24	-0.6
1,694,130	+		IAI47_08020	0.24	-1.6
1,694,130	+		IAI47_08020	0.24	-1.0
1,694,130	+		IAI47_08020	0.24	-0.3
1,694,130	+		IAI47_08020	0.24	-0.6
1,694,131	-		IAI47_08020	0.24	-0.3
1,694,131	-		IAI47_08020	0.24	-0.3
1,694,131	-		IAI47_08020	0.24	+0.5
1,694,137	+		IAI47_08020	0.25	-1.3
1,694,137	+		IAI47_08020	0.25	+0.5
1,694,137	+		IAI47_08020	0.25	+0.4
1,694,137	+		IAI47_08020	0.25	-0.8
1,694,138	-		IAI47_08020	0.25	+0.6
1,694,138	-		IAI47_08020	0.25	+0.9
1,694,138	-		IAI47_08020	0.25	+1.1
1,694,197	+		IAI47_08020	0.34	-0.1
1,694,198	-		IAI47_08020	0.34	-0.7
1,694,216	-		IAI47_08020	0.37	-0.4
1,694,226	+		IAI47_08020	0.38	-1.8
1,694,233	+		IAI47_08020	0.39	+0.1
1,694,233	+		IAI47_08020	0.39	-0.4
1,694,233	+		IAI47_08020	0.39	+0.1
1,694,234	-		IAI47_08020	0.39	-0.3
1,694,234	-		IAI47_08020	0.39	-0.1
1,694,307	+		IAI47_08020	0.50	-0.7
1,694,468	+		IAI47_08020	0.73	-0.6
1,694,605	+				-1.5
1,694,605	+				-0.4
1,694,605	+				+0.4
1,694,605	+				-0.6
1,694,658	+				+0.3
1,694,658	+				-2.8
1,694,658	+				+0.3
1,694,658	+				+2.6
1,694,659	-				-0.2
1,694,659	-				-0.1
1,694,687	-				+0.5
1,694,755	+		IAI47_08025	0.10	+0.7
1,694,755	+		IAI47_08025	0.10	-0.1
1,694,755	+		IAI47_08025	0.10	-0.5
1,694,755	+		IAI47_08025	0.10	+0.1
1,694,756	-		IAI47_08025	0.11	+0.8
1,694,756	-		IAI47_08025	0.11	+1.2
1,694,756	-		IAI47_08025	0.11	+0.3