Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12970

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
2,956,172	+		HSERO_RS12960	0.78	-1.5
2,956,180	-		HSERO_RS12960	0.80	+0.3
2,956,400	+		HSERO_RS12965	0.16	+0.1
2,956,402	+		HSERO_RS12965	0.16	-0.0
2,956,556	-		HSERO_RS12965	0.35	-0.2
2,956,595	+		HSERO_RS12965	0.40	-1.3
2,957,074	+				+0.0
2,957,171	-				-0.1
2,957,250	-		HSERO_RS12970	0.16	+0.1
2,957,289	+		HSERO_RS12970	0.21	-1.2
2,957,330	+		HSERO_RS12970	0.26	-0.5
2,957,338	-		HSERO_RS12970	0.27	-0.4
2,957,539	+		HSERO_RS12970	0.50	-0.3
2,957,680	+		HSERO_RS12970	0.67	-0.2
2,957,756	-		HSERO_RS12970	0.76	-1.6
2,958,078	+				+1.4
2,958,165	+				-0.5
2,958,168	-				+0.5
2,958,476	-		HSERO_RS12975	0.16	-1.7