Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS11990

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
2,727,559	-		HSERO_RS11980	0.47	+0.3
2,727,696	+		HSERO_RS11980	0.86	+0.5
2,727,842	-				-0.3
2,728,200	+		HSERO_RS11985	0.79	-0.1
2,728,222	-		HSERO_RS11985	0.83	+0.5
2,728,304	+				+0.6
2,728,482	-				-0.2
2,728,520	-				+0.2
2,728,571	+				+0.4
2,728,633	-		HSERO_RS11990	0.17	+0.5
2,728,737	-		HSERO_RS11990	0.33	+1.2
2,728,743	-		HSERO_RS11990	0.34	-1.1
2,728,842	+		HSERO_RS11990	0.49	+0.0
2,728,866	-				-1.3
2,728,950	+		HSERO_RS11990	0.66	-0.0
2,729,409	+		HSERO_RS11995	0.41	-0.2
2,729,512	-		HSERO_RS11995	0.65	-0.0
2,729,827	-				-0.1
2,729,901	+				-0.0
2,729,962	-				-0.8
2,730,108	-		HSERO_RS12000	0.27	+0.1
2,730,160	+		HSERO_RS12000	0.34	+0.5