Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS04790

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
1,047,375	-		HSERO_RS04785	0.37	+0.2
1,047,392	+		HSERO_RS04785	0.38	+0.3
1,047,617	-		HSERO_RS04785	0.56	-0.4
1,047,708	+		HSERO_RS04785	0.62	-0.1
1,047,781	-		HSERO_RS04785	0.68	-2.5
1,047,896	+		HSERO_RS04785	0.77	-0.4
1,047,981	+		HSERO_RS04785	0.83	+0.1
1,047,984	-		HSERO_RS04785	0.83	+0.4
1,047,996	+		HSERO_RS04785	0.84	+0.2
1,048,004	-		HSERO_RS04785	0.85	-1.2
1,048,046	+		HSERO_RS04785	0.88	-0.0
1,048,151	+				-0.6
1,048,636	-		HSERO_RS04790	0.31	+1.2
1,048,831	+		HSERO_RS04790	0.46	-0.0
1,048,928	-		HSERO_RS04790	0.54	+0.1
1,049,184	-		HSERO_RS04790	0.74	+0.0
1,049,376	-		HSERO_RS04790	0.89	+1.2
1,049,386	-				+0.4
1,049,412	+				-0.4
1,049,594	-		HSERO_RS04795	0.11	-0.7
1,049,653	+		HSERO_RS04795	0.19	+0.3
1,049,672	-		HSERO_RS04795	0.21	-1.6
1,049,696	-		HSERO_RS04795	0.24	-0.6
1,049,787	-		HSERO_RS04795	0.36	-0.5
1,049,887	-		HSERO_RS04795	0.49	+0.3
1,049,892	+		HSERO_RS04795	0.50	-0.2
1,050,031	-		HSERO_RS04795	0.68	-0.8
1,050,102	-		HSERO_RS04795	0.78	-0.9
1,050,124	-		HSERO_RS04795	0.81	+0.8
1,050,161	+		HSERO_RS04795	0.85	+1.2
1,050,161	-		HSERO_RS04795	0.85	-0.3
1,050,196	+				+0.2
1,050,266	+				-1.5
1,050,289	-				+0.3
1,050,291	+				-0.2
1,050,334	-				+0.4
1,050,393	+		HSERO_RS04800	0.13	-0.2