Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_19710

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_19705 and AO356_19710 are separated by 196 nucleotidesAO356_19710 and AO356_19715 overlap by 1 nucleotides AO356_19705: AO356_19705 - dihydrolipoamide dehydrogenase, at 4,419,674 to 4,421,110 _19705 AO356_19710: AO356_19710 - succinyl-CoA synthetase subunit beta, at 4,421,307 to 4,422,473 _19710 AO356_19715: AO356_19715 - succinyl-CoA synthetase subunit alpha, at 4,422,473 to 4,423,357 _19715 Position (kb) 4421 4422 4423Strain fitness (log2 ratio) -2 -1 0 1at 4421.118 kb on + strandat 4421.283 kb on + strandat 4421.557 kb on - strand, within AO356_19710at 4421.632 kb on - strand, within AO356_19710at 4422.947 kb on + strand, within AO356_19715at 4423.355 kb on + strandat 4423.356 kb on - strandat 4423.356 kb on - strandat 4423.356 kb on - strandat 4423.425 kb on + strandat 4423.426 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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4,421,118 + -0.1
4,421,283 + -0.1
4,421,557 - AO356_19710 0.21 -0.7
4,421,632 - AO356_19710 0.28 -1.7
4,422,947 + AO356_19715 0.54 -0.3
4,423,355 + +0.4
4,423,356 - -0.6
4,423,356 - -2.1
4,423,356 - -1.5
4,423,425 + +0.4
4,423,426 - +0.1

Or see this region's nucleotide sequence