Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_19675

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_19670 and AO356_19675 are separated by 365 nucleotidesAO356_19675 and AO356_19680 overlap by 7 nucleotidesAO356_19680 and AO356_19685 are separated by 3 nucleotides AO356_19670: AO356_19670 - type II citrate synthase, at 4,410,321 to 4,411,610 _19670 AO356_19675: AO356_19675 - succinate dehydrogenase, at 4,411,976 to 4,412,350 _19675 AO356_19680: AO356_19680 - succinate dehydrogenase, at 4,412,344 to 4,412,712 _19680 AO356_19685: AO356_19685 - succinate dehydrogenase, at 4,412,716 to 4,414,488 _19685 Position (kb) 4411 4412 4413Strain fitness (log2 ratio) -1 0 1at 4411.749 kb on + strandat 4411.776 kb on + strandat 4411.790 kb on + strandat 4411.793 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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4,411,749 + -0.1
4,411,776 + +0.2
4,411,790 + +1.2
4,411,793 + +1.6

Or see this region's nucleotide sequence