Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18320 and AO356_18325 are separated by 128 nucleotides AO356_18325 and AO356_18330 are separated by 100 nucleotides
AO356_18320: AO356_18320 - hypothetical protein, at 4,127,267 to 4,128,256
_18320
AO356_18325: AO356_18325 - argininosuccinate synthase, at 4,128,385 to 4,129,602
_18325
AO356_18330: AO356_18330 - hypothetical protein, at 4,129,703 to 4,130,188
_18330
Position (kb) 4128
4129
4130 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 4127.471 kb on + strand, within AO356_18320 at 4127.471 kb on + strand, within AO356_18320 at 4127.471 kb on + strand, within AO356_18320 at 4127.471 kb on + strand, within AO356_18320 at 4127.471 kb on + strand, within AO356_18320 at 4127.471 kb on + strand, within AO356_18320 at 4127.471 kb on + strand, within AO356_18320 at 4127.471 kb on + strand, within AO356_18320 at 4127.471 kb on + strand, within AO356_18320 at 4127.472 kb on - strand, within AO356_18320 at 4127.472 kb on - strand, within AO356_18320 at 4127.472 kb on - strand, within AO356_18320 at 4127.472 kb on - strand, within AO356_18320 at 4127.583 kb on + strand, within AO356_18320 at 4127.583 kb on + strand, within AO356_18320 at 4127.583 kb on + strand, within AO356_18320 at 4127.583 kb on + strand, within AO356_18320 at 4127.583 kb on + strand, within AO356_18320 at 4127.583 kb on + strand, within AO356_18320 at 4127.583 kb on + strand, within AO356_18320 at 4127.583 kb on + strand, within AO356_18320 at 4127.584 kb on - strand, within AO356_18320 at 4127.584 kb on - strand, within AO356_18320 at 4127.584 kb on - strand, within AO356_18320 at 4127.584 kb on - strand, within AO356_18320 at 4127.584 kb on - strand, within AO356_18320 at 4127.584 kb on - strand, within AO356_18320 at 4127.584 kb on - strand, within AO356_18320 at 4127.584 kb on - strand, within AO356_18320 at 4127.662 kb on + strand, within AO356_18320 at 4127.663 kb on - strand, within AO356_18320 at 4127.717 kb on - strand, within AO356_18320 at 4127.733 kb on - strand, within AO356_18320 at 4128.013 kb on + strand, within AO356_18320 at 4128.285 kb on + strand at 4128.306 kb on + strand at 4128.307 kb on - strand at 4128.324 kb on + strand at 4128.329 kb on + strand at 4128.364 kb on + strand at 4128.365 kb on - strand at 4128.365 kb on - strand at 4128.365 kb on - strand at 4128.395 kb on + strand at 4128.395 kb on + strand at 4128.395 kb on + strand at 4128.395 kb on + strand at 4128.395 kb on + strand at 4128.396 kb on - strand at 4128.396 kb on - strand at 4128.396 kb on - strand at 4128.396 kb on - strand at 4128.396 kb on - strand at 4128.396 kb on - strand at 4128.396 kb on - strand at 4128.396 kb on - strand at 4128.415 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.466 kb on + strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.467 kb on - strand at 4128.468 kb on + strand at 4128.468 kb on + strand at 4128.468 kb on + strand at 4128.468 kb on + strand at 4128.469 kb on - strand at 4128.469 kb on - strand at 4128.469 kb on - strand at 4128.469 kb on - strand at 4128.565 kb on + strand, within AO356_18325 at 4128.565 kb on + strand, within AO356_18325 at 4128.565 kb on + strand, within AO356_18325 at 4128.565 kb on + strand, within AO356_18325 at 4128.566 kb on - strand, within AO356_18325 at 4128.566 kb on - strand, within AO356_18325 at 4128.566 kb on - strand, within AO356_18325 at 4128.566 kb on - strand, within AO356_18325 at 4128.635 kb on - strand, within AO356_18325 at 4128.646 kb on + strand, within AO356_18325 at 4128.646 kb on + strand, within AO356_18325 at 4128.646 kb on + strand, within AO356_18325 at 4128.646 kb on + strand, within AO356_18325 at 4128.647 kb on - strand, within AO356_18325 at 4128.647 kb on - strand, within AO356_18325 at 4128.657 kb on + strand, within AO356_18325 at 4128.658 kb on - strand, within AO356_18325 at 4128.784 kb on + strand, within AO356_18325 at 4128.785 kb on - strand, within AO356_18325 at 4128.785 kb on - strand, within AO356_18325 at 4128.863 kb on - strand, within AO356_18325 at 4128.949 kb on + strand, within AO356_18325 at 4128.949 kb on + strand, within AO356_18325 at 4128.949 kb on + strand, within AO356_18325 at 4128.949 kb on + strand, within AO356_18325 at 4129.045 kb on + strand, within AO356_18325 at 4129.046 kb on - strand, within AO356_18325 at 4129.060 kb on + strand, within AO356_18325 at 4129.183 kb on + strand, within AO356_18325 at 4129.183 kb on + strand, within AO356_18325 at 4129.183 kb on + strand, within AO356_18325 at 4129.184 kb on - strand, within AO356_18325 at 4129.211 kb on - strand, within AO356_18325 at 4129.211 kb on - strand, within AO356_18325 at 4129.316 kb on - strand, within AO356_18325 at 4129.316 kb on - strand, within AO356_18325 at 4129.316 kb on - strand, within AO356_18325 at 4129.330 kb on + strand, within AO356_18325 at 4129.331 kb on - strand, within AO356_18325 at 4129.331 kb on - strand, within AO356_18325 at 4129.412 kb on + strand, within AO356_18325 at 4129.413 kb on - strand, within AO356_18325 at 4129.413 kb on - strand, within AO356_18325 at 4129.426 kb on + strand, within AO356_18325 at 4129.426 kb on + strand, within AO356_18325 at 4129.426 kb on + strand, within AO356_18325 at 4129.427 kb on - strand, within AO356_18325 at 4129.427 kb on - strand, within AO356_18325 at 4129.427 kb on - strand, within AO356_18325 at 4129.455 kb on + strand, within AO356_18325 at 4129.456 kb on - strand, within AO356_18325 at 4129.456 kb on - strand, within AO356_18325 at 4129.456 kb on - strand, within AO356_18325 at 4129.516 kb on + strand at 4129.516 kb on + strand at 4129.517 kb on - strand at 4129.517 kb on - strand at 4129.612 kb on + strand at 4129.613 kb on - strand at 4129.614 kb on + strand at 4129.674 kb on + strand at 4129.674 kb on + strand at 4129.674 kb on + strand at 4129.674 kb on + strand at 4129.674 kb on + strand at 4129.674 kb on + strand at 4129.675 kb on - strand at 4129.675 kb on - strand at 4129.675 kb on - strand at 4129.743 kb on + strand at 4129.743 kb on + strand at 4129.743 kb on + strand at 4129.744 kb on - strand at 4129.744 kb on - strand at 4129.752 kb on + strand, within AO356_18330 at 4129.753 kb on - strand, within AO356_18330 at 4129.753 kb on - strand, within AO356_18330 at 4129.753 kb on - strand, within AO356_18330 at 4129.871 kb on + strand, within AO356_18330 at 4129.871 kb on + strand, within AO356_18330 at 4129.871 kb on + strand, within AO356_18330 at 4129.872 kb on - strand, within AO356_18330 at 4129.872 kb on - strand, within AO356_18330 at 4129.872 kb on - strand, within AO356_18330 at 4129.907 kb on + strand, within AO356_18330 at 4129.907 kb on + strand, within AO356_18330 at 4129.907 kb on + strand, within AO356_18330 at 4129.907 kb on + strand, within AO356_18330 at 4129.950 kb on - strand, within AO356_18330 at 4129.987 kb on - strand, within AO356_18330 at 4129.987 kb on - strand, within AO356_18330 at 4129.987 kb on - strand, within AO356_18330 at 4130.034 kb on - strand, within AO356_18330 at 4130.037 kb on + strand, within AO356_18330 at 4130.037 kb on + strand, within AO356_18330 at 4130.037 kb on + strand, within AO356_18330 at 4130.067 kb on + strand, within AO356_18330 at 4130.068 kb on - strand, within AO356_18330 at 4130.239 kb on + strand at 4130.289 kb on + strand at 4130.380 kb on + strand at 4130.387 kb on - strand at 4130.420 kb on + strand at 4130.421 kb on - strand at 4130.442 kb on - strand at 4130.442 kb on - strand at 4130.442 kb on - strand at 4130.442 kb on - strand at 4130.487 kb on + strand at 4130.524 kb on + strand at 4130.525 kb on - strand at 4130.525 kb on - strand at 4130.525 kb on - strand at 4130.539 kb on + strand at 4130.539 kb on + strand at 4130.539 kb on + strand at 4130.540 kb on - strand at 4130.546 kb on + strand at 4130.546 kb on + strand at 4130.546 kb on + strand at 4130.546 kb on + strand at 4130.547 kb on - strand at 4130.596 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 4,127,471 + AO356_18320 0.21 +0.4 4,127,471 + AO356_18320 0.21 +0.7 4,127,471 + AO356_18320 0.21 +0.1 4,127,471 + AO356_18320 0.21 -0.4 4,127,471 + AO356_18320 0.21 +1.2 4,127,471 + AO356_18320 0.21 +0.4 4,127,471 + AO356_18320 0.21 +0.4 4,127,471 + AO356_18320 0.21 -1.2 4,127,471 + AO356_18320 0.21 -0.5 4,127,472 - AO356_18320 0.21 +0.8 4,127,472 - AO356_18320 0.21 +0.1 4,127,472 - AO356_18320 0.21 +0.2 4,127,472 - AO356_18320 0.21 -0.3 4,127,583 + AO356_18320 0.32 +0.5 4,127,583 + AO356_18320 0.32 -0.6 4,127,583 + AO356_18320 0.32 +0.6 4,127,583 + AO356_18320 0.32 -1.2 4,127,583 + AO356_18320 0.32 -0.0 4,127,583 + AO356_18320 0.32 +1.1 4,127,583 + AO356_18320 0.32 -0.3 4,127,583 + AO356_18320 0.32 +0.1 4,127,584 - AO356_18320 0.32 -0.6 4,127,584 - AO356_18320 0.32 -0.1 4,127,584 - AO356_18320 0.32 -0.2 4,127,584 - AO356_18320 0.32 +0.1 4,127,584 - AO356_18320 0.32 -0.1 4,127,584 - AO356_18320 0.32 -0.7 4,127,584 - AO356_18320 0.32 -0.7 4,127,584 - AO356_18320 0.32 -0.2 4,127,662 + AO356_18320 0.40 +0.3 4,127,663 - AO356_18320 0.40 -0.1 4,127,717 - AO356_18320 0.45 +0.3 4,127,733 - AO356_18320 0.47 -0.4 4,128,013 + AO356_18320 0.75 +0.5 4,128,285 + +0.6 4,128,306 + +1.3 4,128,307 - -0.3 4,128,324 + -2.4 4,128,329 + -3.4 4,128,364 + -0.4 4,128,365 - -2.2 4,128,365 - -2.9 4,128,365 - -3.5 4,128,395 + -1.9 4,128,395 + -2.8 4,128,395 + -3.2 4,128,395 + -2.5 4,128,395 + -2.9 4,128,396 - -2.4 4,128,396 - -3.3 4,128,396 - -2.7 4,128,396 - -3.1 4,128,396 - -1.5 4,128,396 - -3.8 4,128,396 - -3.1 4,128,396 - -3.1 4,128,415 + -1.5 4,128,466 + -1.2 4,128,466 + -2.4 4,128,466 + -2.8 4,128,466 + -0.9 4,128,466 + -3.2 4,128,466 + -2.8 4,128,466 + -2.7 4,128,466 + -2.4 4,128,466 + -2.6 4,128,466 + -3.3 4,128,466 + -2.6 4,128,466 + -2.0 4,128,466 + -2.6 4,128,467 - -1.2 4,128,467 - -3.2 4,128,467 - -2.7 4,128,467 - -3.7 4,128,467 - -1.2 4,128,467 - -0.5 4,128,467 - -3.2 4,128,467 - -3.2 4,128,467 - -2.6 4,128,467 - -3.1 4,128,467 - -0.4 4,128,467 - -3.5 4,128,467 - -0.9 4,128,468 + -2.4 4,128,468 + -4.4 4,128,468 + -3.7 4,128,468 + -2.3 4,128,469 - -2.6 4,128,469 - -2.4 4,128,469 - -2.5 4,128,469 - -3.4 4,128,565 + AO356_18325 0.15 -3.5 4,128,565 + AO356_18325 0.15 -3.9 4,128,565 + AO356_18325 0.15 -1.9 4,128,565 + AO356_18325 0.15 -3.3 4,128,566 - AO356_18325 0.15 -0.6 4,128,566 - AO356_18325 0.15 -3.5 4,128,566 - AO356_18325 0.15 -2.3 4,128,566 - AO356_18325 0.15 -2.5 4,128,635 - AO356_18325 0.21 -2.3 4,128,646 + AO356_18325 0.21 -3.7 4,128,646 + AO356_18325 0.21 -2.8 4,128,646 + AO356_18325 0.21 -1.4 4,128,646 + AO356_18325 0.21 -3.1 4,128,647 - AO356_18325 0.22 -2.7 4,128,647 - AO356_18325 0.22 -0.2 4,128,657 + AO356_18325 0.22 -1.8 4,128,658 - AO356_18325 0.22 -0.6 4,128,784 + AO356_18325 0.33 -3.5 4,128,785 - AO356_18325 0.33 -2.0 4,128,785 - AO356_18325 0.33 -3.0 4,128,863 - AO356_18325 0.39 -2.0 4,128,949 + AO356_18325 0.46 -2.4 4,128,949 + AO356_18325 0.46 -2.7 4,128,949 + AO356_18325 0.46 -1.1 4,128,949 + AO356_18325 0.46 -3.8 4,129,045 + AO356_18325 0.54 -2.6 4,129,046 - AO356_18325 0.54 -3.1 4,129,060 + AO356_18325 0.55 -3.5 4,129,183 + AO356_18325 0.66 -3.3 4,129,183 + AO356_18325 0.66 -2.1 4,129,183 + AO356_18325 0.66 -3.2 4,129,184 - AO356_18325 0.66 -3.1 4,129,211 - AO356_18325 0.68 -1.4 4,129,211 - AO356_18325 0.68 -3.9 4,129,316 - AO356_18325 0.76 -4.2 4,129,316 - AO356_18325 0.76 -0.1 4,129,316 - AO356_18325 0.76 -4.1 4,129,330 + AO356_18325 0.78 -3.4 4,129,331 - AO356_18325 0.78 -1.9 4,129,331 - AO356_18325 0.78 -2.2 4,129,412 + AO356_18325 0.84 -2.6 4,129,413 - AO356_18325 0.84 -3.0 4,129,413 - AO356_18325 0.84 -2.9 4,129,426 + AO356_18325 0.85 -1.8 4,129,426 + AO356_18325 0.85 -1.2 4,129,426 + AO356_18325 0.85 -3.0 4,129,427 - AO356_18325 0.86 -2.2 4,129,427 - AO356_18325 0.86 -3.2 4,129,427 - AO356_18325 0.86 -4.5 4,129,455 + AO356_18325 0.88 -3.1 4,129,456 - AO356_18325 0.88 -0.6 4,129,456 - AO356_18325 0.88 -2.3 4,129,456 - AO356_18325 0.88 -3.2 4,129,516 + -2.9 4,129,516 + -3.4 4,129,517 - -3.1 4,129,517 - -3.4 4,129,612 + +0.6 4,129,613 - -2.4 4,129,614 + -1.6 4,129,674 + -1.6 4,129,674 + -0.5 4,129,674 + -0.5 4,129,674 + -1.8 4,129,674 + -1.9 4,129,674 + -0.9 4,129,675 - +0.1 4,129,675 - +0.2 4,129,675 - +0.6 4,129,743 + +0.0 4,129,743 + -1.3 4,129,743 + +1.2 4,129,744 - +0.6 4,129,744 - -0.4 4,129,752 + AO356_18330 0.10 -0.3 4,129,753 - AO356_18330 0.10 -0.9 4,129,753 - AO356_18330 0.10 -0.4 4,129,753 - AO356_18330 0.10 -0.8 4,129,871 + AO356_18330 0.35 -0.4 4,129,871 + AO356_18330 0.35 -2.4 4,129,871 + AO356_18330 0.35 -1.4 4,129,872 - AO356_18330 0.35 -0.5 4,129,872 - AO356_18330 0.35 +0.6 4,129,872 - AO356_18330 0.35 +0.4 4,129,907 + AO356_18330 0.42 -0.4 4,129,907 + AO356_18330 0.42 -0.7 4,129,907 + AO356_18330 0.42 -1.1 4,129,907 + AO356_18330 0.42 -1.2 4,129,950 - AO356_18330 0.51 -0.3 4,129,987 - AO356_18330 0.58 +0.2 4,129,987 - AO356_18330 0.58 +0.2 4,129,987 - AO356_18330 0.58 +0.1 4,130,034 - AO356_18330 0.68 -0.2 4,130,037 + AO356_18330 0.69 -1.2 4,130,037 + AO356_18330 0.69 -1.2 4,130,037 + AO356_18330 0.69 -1.4 4,130,067 + AO356_18330 0.75 +0.4 4,130,068 - AO356_18330 0.75 -0.1 4,130,239 + -1.2 4,130,289 + -1.5 4,130,380 + -0.9 4,130,387 - +0.2 4,130,420 + -1.1 4,130,421 - +0.7 4,130,442 - +0.4 4,130,442 - -0.0 4,130,442 - +0.5 4,130,442 - -0.0 4,130,487 + -1.3 4,130,524 + -1.3 4,130,525 - -1.2 4,130,525 - -0.3 4,130,525 - +0.4 4,130,539 + -2.8 4,130,539 + -0.3 4,130,539 + -1.4 4,130,540 - +0.1 4,130,546 + -0.1 4,130,546 + -0.9 4,130,546 + -1.0 4,130,546 + -2.5 4,130,547 - -0.6 4,130,596 + -0.9
Or see this region's nucleotide sequence