Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08960 and AO356_08965 are separated by 11 nucleotides AO356_08965 and AO356_08970 are separated by 376 nucleotides
AO356_08960: AO356_08960 - pyruvate dehydrogenase, at 2,022,501 to 2,025,146
_08960
AO356_08965: AO356_08965 - dihydrolipoamide acetyltransferase, at 2,025,158 to 2,026,798
_08965
AO356_08970: AO356_08970 - phosphodiesterase, at 2,027,175 to 2,028,566
_08970
Position (kb)
2025
2026
2027 Strain fitness (log2 ratio)
-2
-1
0
1 at 2027.007 kb on + strand at 2027.008 kb on - strand at 2027.028 kb on + strand at 2027.028 kb on + strand at 2027.029 kb on - strand at 2027.029 kb on - strand at 2027.036 kb on + strand at 2027.036 kb on + strand at 2027.036 kb on + strand at 2027.036 kb on + strand at 2027.037 kb on - strand at 2027.037 kb on - strand at 2027.037 kb on - strand at 2027.086 kb on + strand at 2027.090 kb on + strand at 2027.090 kb on + strand at 2027.090 kb on + strand at 2027.090 kb on + strand at 2027.091 kb on - strand at 2027.091 kb on - strand at 2027.091 kb on - strand at 2027.091 kb on - strand at 2027.107 kb on + strand at 2027.107 kb on + strand at 2027.107 kb on + strand at 2027.108 kb on - strand at 2027.108 kb on - strand at 2027.108 kb on - strand at 2027.108 kb on - strand at 2027.152 kb on + strand at 2027.153 kb on - strand at 2027.174 kb on + strand at 2027.174 kb on + strand at 2027.174 kb on + strand at 2027.175 kb on - strand at 2027.175 kb on - strand at 2027.175 kb on - strand at 2027.175 kb on - strand at 2027.187 kb on - strand at 2027.187 kb on - strand at 2027.267 kb on - strand at 2027.400 kb on + strand, within AO356_08970 at 2027.401 kb on - strand, within AO356_08970 at 2027.487 kb on + strand, within AO356_08970 at 2027.487 kb on + strand, within AO356_08970 at 2027.487 kb on + strand, within AO356_08970 at 2027.487 kb on + strand, within AO356_08970 at 2027.487 kb on + strand, within AO356_08970 at 2027.487 kb on + strand, within AO356_08970 at 2027.487 kb on + strand, within AO356_08970 at 2027.487 kb on + strand, within AO356_08970 at 2027.487 kb on + strand, within AO356_08970 at 2027.487 kb on + strand, within AO356_08970 at 2027.488 kb on - strand, within AO356_08970 at 2027.488 kb on - strand, within AO356_08970 at 2027.488 kb on - strand, within AO356_08970 at 2027.488 kb on - strand, within AO356_08970 at 2027.488 kb on - strand, within AO356_08970 at 2027.520 kb on - strand, within AO356_08970 at 2027.532 kb on + strand, within AO356_08970 at 2027.532 kb on + strand, within AO356_08970 at 2027.532 kb on + strand, within AO356_08970 at 2027.532 kb on + strand, within AO356_08970 at 2027.532 kb on + strand, within AO356_08970 at 2027.532 kb on + strand, within AO356_08970 at 2027.532 kb on + strand, within AO356_08970 at 2027.532 kb on + strand, within AO356_08970 at 2027.532 kb on + strand, within AO356_08970 at 2027.533 kb on - strand, within AO356_08970 at 2027.533 kb on - strand, within AO356_08970 at 2027.533 kb on - strand, within AO356_08970 at 2027.533 kb on - strand, within AO356_08970 at 2027.533 kb on - strand, within AO356_08970 at 2027.534 kb on + strand, within AO356_08970 at 2027.534 kb on + strand, within AO356_08970 at 2027.534 kb on + strand, within AO356_08970 at 2027.534 kb on + strand, within AO356_08970 at 2027.535 kb on - strand, within AO356_08970 at 2027.535 kb on - strand, within AO356_08970 at 2027.535 kb on - strand, within AO356_08970 at 2027.535 kb on - strand, within AO356_08970 at 2027.535 kb on - strand, within AO356_08970 at 2027.553 kb on + strand, within AO356_08970 at 2027.553 kb on + strand, within AO356_08970 at 2027.554 kb on - strand, within AO356_08970 at 2027.581 kb on + strand, within AO356_08970 at 2027.581 kb on + strand, within AO356_08970 at 2027.683 kb on - strand, within AO356_08970 at 2027.683 kb on - strand, within AO356_08970 at 2027.683 kb on - strand, within AO356_08970 at 2027.683 kb on - strand, within AO356_08970 at 2027.699 kb on + strand, within AO356_08970 at 2027.700 kb on - strand, within AO356_08970 at 2027.700 kb on - strand, within AO356_08970 at 2027.721 kb on + strand, within AO356_08970 at 2027.721 kb on + strand, within AO356_08970 at 2027.722 kb on - strand, within AO356_08970 at 2027.722 kb on - strand, within AO356_08970 at 2027.723 kb on + strand, within AO356_08970 at 2027.723 kb on + strand, within AO356_08970 at 2027.724 kb on - strand, within AO356_08970
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 2,027,007 + -0.3 2,027,008 - +0.1 2,027,028 + -0.3 2,027,028 + +0.8 2,027,029 - +0.4 2,027,029 - -0.1 2,027,036 + +0.8 2,027,036 + -0.2 2,027,036 + +0.5 2,027,036 + +0.4 2,027,037 - -1.0 2,027,037 - +0.3 2,027,037 - +0.4 2,027,086 + -0.0 2,027,090 + +0.1 2,027,090 + +0.3 2,027,090 + +0.1 2,027,090 + -0.2 2,027,091 - +1.0 2,027,091 - +0.8 2,027,091 - -0.4 2,027,091 - -0.2 2,027,107 + +0.4 2,027,107 + -0.5 2,027,107 + -0.5 2,027,108 - +0.3 2,027,108 - -1.8 2,027,108 - +0.7 2,027,108 - -0.0 2,027,152 + +0.5 2,027,153 - +0.7 2,027,174 + +0.1 2,027,174 + -0.0 2,027,174 + +0.2 2,027,175 - +0.3 2,027,175 - +0.7 2,027,175 - +0.6 2,027,175 - +0.5 2,027,187 - -0.4 2,027,187 - +0.4 2,027,267 - -0.5 2,027,400 + AO356_08970 0.16 -0.2 2,027,401 - AO356_08970 0.16 +0.7 2,027,487 + AO356_08970 0.22 +0.4 2,027,487 + AO356_08970 0.22 +0.2 2,027,487 + AO356_08970 0.22 -0.0 2,027,487 + AO356_08970 0.22 +0.4 2,027,487 + AO356_08970 0.22 -1.2 2,027,487 + AO356_08970 0.22 +0.5 2,027,487 + AO356_08970 0.22 +0.0 2,027,487 + AO356_08970 0.22 +0.1 2,027,487 + AO356_08970 0.22 +0.1 2,027,487 + AO356_08970 0.22 +0.1 2,027,488 - AO356_08970 0.22 +1.4 2,027,488 - AO356_08970 0.22 +0.7 2,027,488 - AO356_08970 0.22 -0.2 2,027,488 - AO356_08970 0.22 -0.0 2,027,488 - AO356_08970 0.22 +1.1 2,027,520 - AO356_08970 0.25 +0.5 2,027,532 + AO356_08970 0.26 -0.3 2,027,532 + AO356_08970 0.26 +0.7 2,027,532 + AO356_08970 0.26 +0.5 2,027,532 + AO356_08970 0.26 +0.2 2,027,532 + AO356_08970 0.26 +1.0 2,027,532 + AO356_08970 0.26 +0.5 2,027,532 + AO356_08970 0.26 +0.6 2,027,532 + AO356_08970 0.26 +1.0 2,027,532 + AO356_08970 0.26 +0.3 2,027,533 - AO356_08970 0.26 -0.0 2,027,533 - AO356_08970 0.26 -1.1 2,027,533 - AO356_08970 0.26 +0.3 2,027,533 - AO356_08970 0.26 +0.1 2,027,533 - AO356_08970 0.26 +0.9 2,027,534 + AO356_08970 0.26 -0.1 2,027,534 + AO356_08970 0.26 +0.9 2,027,534 + AO356_08970 0.26 +0.2 2,027,534 + AO356_08970 0.26 -1.2 2,027,535 - AO356_08970 0.26 +0.5 2,027,535 - AO356_08970 0.26 +1.1 2,027,535 - AO356_08970 0.26 -0.2 2,027,535 - AO356_08970 0.26 -0.0 2,027,535 - AO356_08970 0.26 +0.9 2,027,553 + AO356_08970 0.27 +1.5 2,027,553 + AO356_08970 0.27 +1.0 2,027,554 - AO356_08970 0.27 +0.8 2,027,581 + AO356_08970 0.29 -0.7 2,027,581 + AO356_08970 0.29 +1.1 2,027,683 - AO356_08970 0.36 +0.2 2,027,683 - AO356_08970 0.36 -0.5 2,027,683 - AO356_08970 0.36 +0.2 2,027,683 - AO356_08970 0.36 +0.9 2,027,699 + AO356_08970 0.38 +0.5 2,027,700 - AO356_08970 0.38 +0.2 2,027,700 - AO356_08970 0.38 +0.4 2,027,721 + AO356_08970 0.39 +0.3 2,027,721 + AO356_08970 0.39 +0.7 2,027,722 - AO356_08970 0.39 -0.4 2,027,722 - AO356_08970 0.39 +0.9 2,027,723 + AO356_08970 0.39 -0.0 2,027,723 + AO356_08970 0.39 +1.1 2,027,724 - AO356_08970 0.39 -0.4
Or see this region's nucleotide sequence