Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00555 and AO356_00560 overlap by 17 nucleotides AO356_00560 and AO356_00565 are separated by 244 nucleotides
AO356_00555: AO356_00555 - sulfite reductase, at 119,845 to 121,503
_00555
AO356_00560: AO356_00560 - required for sulfate utilization, putative electron transport protein for sulfite reductase <small>(from data)</small>, at 121,487 to 121,981
_00560
AO356_00565: AO356_00565 - peptidase, at 122,226 to 123,257
_00565
Position (kb) 121
122 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 120.529 kb on + strand, within AO356_00555 at 120.530 kb on - strand, within AO356_00555 at 120.554 kb on - strand, within AO356_00555 at 120.554 kb on - strand, within AO356_00555 at 120.583 kb on + strand, within AO356_00555 at 120.583 kb on + strand, within AO356_00555 at 120.583 kb on + strand, within AO356_00555 at 120.583 kb on + strand, within AO356_00555 at 120.584 kb on - strand, within AO356_00555 at 120.584 kb on - strand, within AO356_00555 at 120.584 kb on - strand, within AO356_00555 at 120.584 kb on - strand, within AO356_00555 at 120.736 kb on + strand, within AO356_00555 at 120.736 kb on + strand, within AO356_00555 at 120.737 kb on - strand, within AO356_00555 at 120.844 kb on + strand, within AO356_00555 at 120.845 kb on - strand, within AO356_00555 at 121.174 kb on + strand, within AO356_00555 at 121.174 kb on + strand, within AO356_00555 at 121.291 kb on + strand, within AO356_00555 at 121.292 kb on - strand, within AO356_00555 at 121.292 kb on - strand, within AO356_00555 at 121.292 kb on - strand, within AO356_00555 at 121.292 kb on - strand, within AO356_00555 at 121.405 kb on + strand at 121.405 kb on + strand at 121.406 kb on - strand at 121.406 kb on - strand at 121.447 kb on + strand at 121.447 kb on + strand at 121.448 kb on - strand at 121.448 kb on - strand at 121.455 kb on + strand at 121.455 kb on + strand at 121.456 kb on - strand at 121.456 kb on - strand at 121.456 kb on - strand at 121.456 kb on - strand at 121.456 kb on - strand at 121.486 kb on + strand at 121.501 kb on + strand at 121.501 kb on + strand at 121.502 kb on - strand at 121.841 kb on + strand, within AO356_00560 at 121.841 kb on + strand, within AO356_00560 at 121.934 kb on + strand at 121.934 kb on + strand at 122.215 kb on + strand at 122.215 kb on + strand at 122.335 kb on + strand, within AO356_00565 at 122.380 kb on + strand, within AO356_00565 at 122.381 kb on - strand, within AO356_00565 at 122.486 kb on - strand, within AO356_00565 at 122.593 kb on + strand, within AO356_00565 at 122.738 kb on - strand, within AO356_00565 at 122.827 kb on + strand, within AO356_00565 at 122.827 kb on + strand, within AO356_00565 at 122.828 kb on - strand, within AO356_00565 at 122.828 kb on - strand, within AO356_00565 at 122.828 kb on - strand, within AO356_00565
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 120,529 + AO356_00555 0.41 -2.7 120,530 - AO356_00555 0.41 -2.9 120,554 - AO356_00555 0.43 -2.8 120,554 - AO356_00555 0.43 -2.9 120,583 + AO356_00555 0.44 -3.2 120,583 + AO356_00555 0.44 -1.0 120,583 + AO356_00555 0.44 -3.2 120,583 + AO356_00555 0.44 -2.9 120,584 - AO356_00555 0.45 -5.0 120,584 - AO356_00555 0.45 -3.2 120,584 - AO356_00555 0.45 -3.7 120,584 - AO356_00555 0.45 -3.9 120,736 + AO356_00555 0.54 -3.1 120,736 + AO356_00555 0.54 -3.2 120,737 - AO356_00555 0.54 -2.1 120,844 + AO356_00555 0.60 -3.3 120,845 - AO356_00555 0.60 -4.0 121,174 + AO356_00555 0.80 -3.2 121,174 + AO356_00555 0.80 -0.3 121,291 + AO356_00555 0.87 -3.8 121,292 - AO356_00555 0.87 -3.6 121,292 - AO356_00555 0.87 -3.2 121,292 - AO356_00555 0.87 -3.2 121,292 - AO356_00555 0.87 -1.4 121,405 + -2.7 121,405 + -3.1 121,406 - -3.9 121,406 - -2.5 121,447 + -2.7 121,447 + -4.2 121,448 - -2.6 121,448 - -3.6 121,455 + -1.7 121,455 + -2.4 121,456 - -3.4 121,456 - -3.3 121,456 - -3.3 121,456 - -3.5 121,456 - -2.8 121,486 + -2.0 121,501 + -2.7 121,501 + -3.2 121,502 - -3.2 121,841 + AO356_00560 0.72 -2.5 121,841 + AO356_00560 0.72 -3.6 121,934 + -0.3 121,934 + +0.6 122,215 + -0.6 122,215 + -1.2 122,335 + AO356_00565 0.11 +0.3 122,380 + AO356_00565 0.15 +1.6 122,381 - AO356_00565 0.15 +0.0 122,486 - AO356_00565 0.25 -1.1 122,593 + AO356_00565 0.36 +0.3 122,738 - AO356_00565 0.50 +0.1 122,827 + AO356_00565 0.58 -1.5 122,827 + AO356_00565 0.58 -0.2 122,828 - AO356_00565 0.58 +0.3 122,828 - AO356_00565 0.58 +0.7 122,828 - AO356_00565 0.58 -1.2
Or see this region's nucleotide sequence