Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2044

Experiment: apoplastic, grinding recovery; Green bean

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	apoplastic, grinding recovery; Green bean
2,383,707	+				+0.8
2,383,707	+				+2.5
2,383,708	-				+1.0
2,383,708	-				+1.0
2,383,739	-				+0.5
2,383,844	-				+3.0
2,383,844	-				+1.4
2,383,851	+				-3.8
2,383,900	+				-0.3
2,383,901	-				-2.6
2,383,901	-				-1.9
2,383,901	-				-0.2
2,383,988	-				+0.9
2,384,044	+				+0.3
2,384,044	+				-2.2
2,384,044	+				-0.9
2,384,044	+				-1.7
2,384,045	-				+0.6
2,384,045	-				+0.3
2,384,121	+				-1.7
2,384,126	-				+1.4
2,384,126	-				-0.1
2,384,167	+		Psyr_2043	0.12	-0.6
2,384,167	+		Psyr_2043	0.12	+0.4
2,384,168	-		Psyr_2043	0.12	-3.4
2,384,168	-		Psyr_2043	0.12	+1.1
2,384,168	-		Psyr_2043	0.12	-3.0
2,384,294	+		Psyr_2043	0.38	+1.2
2,384,295	-		Psyr_2043	0.38	-3.2
2,384,342	+		Psyr_2043	0.48	-1.8
2,384,343	-		Psyr_2043	0.48	+1.4
2,384,343	-		Psyr_2043	0.48	-0.6
2,384,343	-		Psyr_2043	0.48	-0.2
2,384,343	-		Psyr_2043	0.48	-0.6
2,384,343	-		Psyr_2043	0.48	-1.7
2,384,343	-		Psyr_2043	0.48	+1.2
2,384,435	+		Psyr_2043	0.67	+1.2
2,384,435	+		Psyr_2043	0.67	+0.1
2,384,436	-		Psyr_2043	0.67	-0.8
2,384,436	-		Psyr_2043	0.67	-1.9
2,384,436	-		Psyr_2043	0.67	+0.1
2,384,436	-		Psyr_2043	0.67	-2.2
2,384,436	-		Psyr_2043	0.67	+0.9
2,384,518	+		Psyr_2043	0.84	+1.7
2,384,518	+		Psyr_2043	0.84	-1.9
2,384,534	+		Psyr_2043	0.87	-2.2
2,384,534	+		Psyr_2043	0.87	-2.2
2,384,534	+		Psyr_2043	0.87	-2.7
2,384,534	+		Psyr_2043	0.87	+2.4
2,384,534	+		Psyr_2043	0.87	-0.6
2,384,535	-		Psyr_2043	0.87	+0.2
2,384,536	+		Psyr_2043	0.87	-2.8
2,384,537	-		Psyr_2043	0.88	+1.1
2,384,537	-		Psyr_2043	0.88	+1.3
2,384,537	-		Psyr_2043	0.88	+0.4
2,384,553	+				-2.9
2,384,587	-				-1.2
2,384,587	-				-0.2
2,384,595	-				+1.0
2,384,666	+				+0.7
2,384,667	-				-0.0
2,384,668	+				+1.4
2,384,669	-				-1.3
2,384,738	+				+0.0
2,384,738	+				+0.1
2,384,739	-				-0.3
2,384,739	-				+1.9
2,384,739	-				-0.5
2,384,739	-				+1.3
2,384,742	+				+0.1
2,384,742	+				+0.3
2,384,742	+				-2.7
2,384,742	+				+1.1
2,384,742	+				+0.4
2,384,742	+				-1.6
2,384,742	+				-0.0
2,384,743	-				-2.2
2,384,743	-				+0.9
2,384,743	-				-2.2
2,384,743	-				-1.4
2,384,743	-				+2.0
2,384,774	+				-0.8
2,384,845	+				-0.4
2,384,849	+				-1.4
2,384,849	+				-0.7
2,384,849	+				+1.1
2,384,850	-				-0.2
2,384,850	-				+2.3
2,384,850	-				+0.4
2,384,850	-				-2.0
2,384,850	-				-1.7
2,384,850	-				-4.0
2,385,026	+				-0.7
2,385,026	+				-1.4
2,385,027	-				+0.7
2,385,027	-				-2.7
2,385,027	-				-1.7
2,385,167	+		Psyr_2044	0.10	+0.8
2,385,167	+		Psyr_2044	0.10	+0.8
2,385,381	+		Psyr_2044	0.15	-1.9
2,385,382	-		Psyr_2044	0.15	-0.9
2,385,383	+		Psyr_2044	0.15	+3.8
2,385,383	+		Psyr_2044	0.15	-2.9
2,385,383	+		Psyr_2044	0.15	+1.7
2,385,383	+		Psyr_2044	0.15	+0.4
2,385,405	+		Psyr_2044	0.15	+1.5
2,385,405	+		Psyr_2044	0.15	+0.3
2,385,405	+		Psyr_2044	0.15	-3.4
2,385,405	+		Psyr_2044	0.15	+0.3
2,385,405	+		Psyr_2044	0.15	+0.2
2,385,405	+		Psyr_2044	0.15	-1.2
2,385,405	+		Psyr_2044	0.15	-1.3
2,385,405	+		Psyr_2044	0.15	+1.4
2,385,405	+		Psyr_2044	0.15	+2.3
2,385,405	+		Psyr_2044	0.15	+0.3
2,385,405	+		Psyr_2044	0.15	+1.7
2,385,405	+		Psyr_2044	0.15	-0.9
2,385,405	+		Psyr_2044	0.15	+1.2
2,385,405	+		Psyr_2044	0.15	-0.7
2,385,405	+		Psyr_2044	0.15	-1.0
2,385,406	-		Psyr_2044	0.15	-3.4
2,385,406	-		Psyr_2044	0.15	-2.0
2,385,406	-		Psyr_2044	0.15	+0.7
2,385,406	-		Psyr_2044	0.15	-0.7
2,385,406	-		Psyr_2044	0.15	-0.6
2,385,406	-		Psyr_2044	0.15	-2.4
2,385,406	-		Psyr_2044	0.15	-3.6
2,385,406	-		Psyr_2044	0.15	-0.1
2,385,406	-		Psyr_2044	0.15	+0.4
2,385,406	-		Psyr_2044	0.15	+1.8
2,385,455	+		Psyr_2044	0.16	+1.4
2,385,455	+		Psyr_2044	0.16	-3.5
2,385,455	+		Psyr_2044	0.16	+2.2
2,385,456	-		Psyr_2044	0.16	+1.4
2,385,456	-		Psyr_2044	0.16	+0.7
2,385,456	-		Psyr_2044	0.16	-2.4
2,385,457	+		Psyr_2044	0.16	+1.0
2,385,567	-		Psyr_2044	0.19	-1.4
2,385,680	+		Psyr_2044	0.21	+1.8
2,385,681	-		Psyr_2044	0.21	+0.5
2,385,833	+		Psyr_2044	0.24	+1.0
2,385,833	+		Psyr_2044	0.24	-2.3
2,385,833	+		Psyr_2044	0.24	-0.2
2,385,834	-		Psyr_2044	0.24	-1.4
2,385,834	-		Psyr_2044	0.24	-0.1
2,385,834	-		Psyr_2044	0.24	-2.4
2,385,882	+		Psyr_2044	0.25	-0.1
2,385,959	+		Psyr_2044	0.27	+0.3
2,385,959	+		Psyr_2044	0.27	-0.7
2,385,959	+		Psyr_2044	0.27	+0.6
2,385,960	-		Psyr_2044	0.27	+0.1
2,385,960	-		Psyr_2044	0.27	-0.3
2,385,960	-		Psyr_2044	0.27	+1.0
2,386,003	+		Psyr_2044	0.28	-1.2
2,386,188	+		Psyr_2044	0.32	+2.7
2,386,188	+		Psyr_2044	0.32	+2.4
2,386,189	-		Psyr_2044	0.32	-2.0
2,386,222	-		Psyr_2044	0.32	+1.3
2,386,268	+		Psyr_2044	0.33	-0.8
2,386,269	-		Psyr_2044	0.33	-2.4
2,386,269	-		Psyr_2044	0.33	+0.6
2,386,269	-		Psyr_2044	0.33	-3.0
2,386,269	-		Psyr_2044	0.33	+0.7
2,386,269	-		Psyr_2044	0.33	-0.4
2,386,361	+		Psyr_2044	0.35	-2.3
2,386,361	+		Psyr_2044	0.35	-0.2
2,386,361	+		Psyr_2044	0.35	+2.6
2,386,361	+		Psyr_2044	0.35	-1.4
2,386,361	+		Psyr_2044	0.35	-2.6
2,386,362	-		Psyr_2044	0.35	-3.0
2,386,362	-		Psyr_2044	0.35	+0.8
2,386,362	-		Psyr_2044	0.35	+1.1
2,386,362	-		Psyr_2044	0.35	+1.5
2,386,367	+		Psyr_2044	0.35	+0.7
2,386,368	-		Psyr_2044	0.35	+1.0
2,386,368	-		Psyr_2044	0.35	+1.1
2,386,368	-		Psyr_2044	0.35	-2.9
2,386,391	+		Psyr_2044	0.36	-2.3
2,386,391	+		Psyr_2044	0.36	-0.8
2,386,392	-		Psyr_2044	0.36	+1.4
2,386,392	-		Psyr_2044	0.36	+1.7
2,386,526	+		Psyr_2044	0.39	+1.5
2,386,526	+		Psyr_2044	0.39	-2.3
2,386,533	-		Psyr_2044	0.39	+1.1
2,386,582	+		Psyr_2044	0.40	-2.7
2,386,582	+		Psyr_2044	0.40	-0.8
2,386,582	+		Psyr_2044	0.40	+0.8
2,386,582	+		Psyr_2044	0.40	+1.6
2,386,582	+		Psyr_2044	0.40	-2.2
2,386,583	-		Psyr_2044	0.40	+0.4
2,386,587	-		Psyr_2044	0.40	+1.2
2,386,587	-		Psyr_2044	0.40	-0.6
2,386,604	+		Psyr_2044	0.40	+2.8
2,386,605	-		Psyr_2044	0.40	-2.0
2,386,769	+		Psyr_2044	0.44	+0.2
2,386,769	+		Psyr_2044	0.44	+0.7
2,386,769	+		Psyr_2044	0.44	-2.5
2,386,769	+		Psyr_2044	0.44	-1.2
2,386,770	-		Psyr_2044	0.44	+0.3
2,386,860	-		Psyr_2044	0.46	+0.4
2,386,909	+		Psyr_2044	0.47	+0.7
2,386,973	-		Psyr_2044	0.48	-2.7
2,386,973	-		Psyr_2044	0.48	-2.0
2,386,973	-		Psyr_2044	0.48	-0.2
2,387,106	-		Psyr_2044	0.51	-1.4
2,387,106	-		Psyr_2044	0.51	+2.4
2,387,149	-		Psyr_2044	0.52	-2.6
2,387,171	+		Psyr_2044	0.52	-0.2
2,387,171	+		Psyr_2044	0.52	+0.8
2,387,171	+		Psyr_2044	0.52	+1.4
2,387,171	+		Psyr_2044	0.52	+1.1
2,387,171	+		Psyr_2044	0.52	-2.9
2,387,171	+		Psyr_2044	0.52	+2.2
2,387,171	+		Psyr_2044	0.52	-0.8
2,387,171	+		Psyr_2044	0.52	-0.5
2,387,172	-		Psyr_2044	0.52	-0.6
2,387,172	-		Psyr_2044	0.52	+0.6
2,387,172	-		Psyr_2044	0.52	-3.0
2,387,172	-		Psyr_2044	0.52	+1.9
2,387,172	-		Psyr_2044	0.52	-3.2
2,387,172	-		Psyr_2044	0.52	-2.2
2,387,172	-		Psyr_2044	0.52	+0.4
2,387,172	-		Psyr_2044	0.52	-0.2
2,387,172	-		Psyr_2044	0.52	+0.8
2,387,172	-		Psyr_2044	0.52	-0.6
2,387,177	+		Psyr_2044	0.53	-0.6
2,387,240	+		Psyr_2044	0.54	+0.8
2,387,240	+		Psyr_2044	0.54	-1.3
2,387,240	+		Psyr_2044	0.54	-2.1
2,387,240	+		Psyr_2044	0.54	+1.0
2,387,240	+		Psyr_2044	0.54	+0.3
2,387,240	+		Psyr_2044	0.54	+0.8
2,387,241	-		Psyr_2044	0.54	+2.0
2,387,241	-		Psyr_2044	0.54	-0.2
2,387,241	-		Psyr_2044	0.54	+1.8
2,387,241	-		Psyr_2044	0.54	-3.8
2,387,241	-		Psyr_2044	0.54	-1.9
2,387,374	+		Psyr_2044	0.57	-1.2
2,387,374	+		Psyr_2044	0.57	-0.4
2,387,374	+		Psyr_2044	0.57	+2.0
2,387,375	-		Psyr_2044	0.57	-0.6
2,387,375	-		Psyr_2044	0.57	+1.7
2,387,384	+		Psyr_2044	0.57	-2.7
2,387,385	-		Psyr_2044	0.57	+1.8
2,387,450	+		Psyr_2044	0.58	-0.3
2,387,450	+		Psyr_2044	0.58	-1.9
2,387,606	+		Psyr_2044	0.62	+0.1
2,387,606	+		Psyr_2044	0.62	-0.4
2,387,606	+		Psyr_2044	0.62	+2.0
2,387,607	-		Psyr_2044	0.62	+1.4
2,387,607	-		Psyr_2044	0.62	-3.5
2,387,611	+		Psyr_2044	0.62	-1.4
2,387,655	+		Psyr_2044	0.63	-1.4
2,387,669	+		Psyr_2044	0.63	+0.6
2,387,669	+		Psyr_2044	0.63	-0.3
2,387,670	-		Psyr_2044	0.63	+3.5
2,387,670	-		Psyr_2044	0.63	+0.8
2,387,670	-		Psyr_2044	0.63	+1.6
2,387,672	+		Psyr_2044	0.63	+0.9
2,387,672	+		Psyr_2044	0.63	+0.8
2,387,673	-		Psyr_2044	0.63	-0.4
2,387,673	-		Psyr_2044	0.63	-2.8
2,387,673	-		Psyr_2044	0.63	-0.2
2,387,673	-		Psyr_2044	0.63	-2.4
2,387,724	-		Psyr_2044	0.64	+0.2
2,387,735	+		Psyr_2044	0.64	-0.4
2,387,736	-		Psyr_2044	0.64	-3.8
2,387,736	-		Psyr_2044	0.64	-1.4
2,387,741	+		Psyr_2044	0.64	-2.9
2,387,741	+		Psyr_2044	0.64	-1.4
2,387,741	+		Psyr_2044	0.64	-2.0
2,387,742	-		Psyr_2044	0.64	+2.3
2,387,742	-		Psyr_2044	0.64	-2.8
2,387,742	-		Psyr_2044	0.64	-2.7
2,387,769	-		Psyr_2044	0.65	+0.0
2,387,779	-		Psyr_2044	0.65	+2.0
2,387,805	-		Psyr_2044	0.66	-2.0
2,387,850	-		Psyr_2044	0.67	-2.9
2,387,865	-		Psyr_2044	0.67	-0.6
2,387,955	-		Psyr_2044	0.69	+0.2
2,387,955	-		Psyr_2044	0.69	+1.8
2,387,976	+		Psyr_2044	0.69	+0.9
2,387,976	+		Psyr_2044	0.69	+1.4
2,387,976	+		Psyr_2044	0.69	+2.8
2,387,977	-		Psyr_2044	0.69	-3.3
2,387,977	-		Psyr_2044	0.69	-2.4
2,387,983	+		Psyr_2044	0.70	+1.2
2,387,983	+		Psyr_2044	0.70	-1.2
2,387,983	+		Psyr_2044	0.70	+0.1
2,387,984	-		Psyr_2044	0.70	+1.8
2,388,026	+		Psyr_2044	0.70	-3.0
2,388,078	+		Psyr_2044	0.72	+2.2
2,388,079	-		Psyr_2044	0.72	-2.0
2,388,079	-		Psyr_2044	0.72	-1.6
2,388,095	+		Psyr_2044	0.72	-2.5
2,388,095	+		Psyr_2044	0.72	+1.2
2,388,095	+		Psyr_2044	0.72	-2.7
2,388,096	-		Psyr_2044	0.72	-2.5
2,388,096	-		Psyr_2044	0.72	-1.7
2,388,101	+		Psyr_2044	0.72	+1.3
2,388,101	+		Psyr_2044	0.72	+0.9
2,388,102	-		Psyr_2044	0.72	+2.1
2,388,102	-		Psyr_2044	0.72	-1.6
2,388,107	-		Psyr_2044	0.72	+3.0
2,388,107	-		Psyr_2044	0.72	-1.6
2,388,107	-		Psyr_2044	0.72	-1.9
2,388,165	-		Psyr_2044	0.73	-2.0
2,388,323	+		Psyr_2044	0.77	+1.4
2,388,350	+		Psyr_2044	0.77	-1.6
2,388,401	+		Psyr_2044	0.78	-2.0
2,388,401	+		Psyr_2044	0.78	+0.2
2,388,401	+		Psyr_2044	0.78	+2.7
2,388,401	+		Psyr_2044	0.78	-1.9
2,388,402	-		Psyr_2044	0.78	-0.2
2,388,402	-		Psyr_2044	0.78	-0.9
2,388,429	+		Psyr_2044	0.79	+0.5
2,388,429	+		Psyr_2044	0.79	+1.3
2,388,430	-		Psyr_2044	0.79	+2.4
2,388,430	-		Psyr_2044	0.79	+1.5
2,388,590	+		Psyr_2044	0.82	-1.4
2,388,695	+		Psyr_2044	0.85	+1.2
2,388,696	-		Psyr_2044	0.85	-1.0
2,388,697	+		Psyr_2044	0.85	+0.4
2,388,697	+		Psyr_2044	0.85	-0.9
2,388,698	-		Psyr_2044	0.85	-0.2
2,388,884	+		Psyr_2044	0.89	-0.2
2,388,890	+		Psyr_2044	0.89	+2.1
2,388,891	-		Psyr_2044	0.89	-2.0
2,388,891	-		Psyr_2044	0.89	+1.1
2,388,891	-		Psyr_2044	0.89	+0.1
2,388,891	-		Psyr_2044	0.89	+3.7
2,388,891	-		Psyr_2044	0.89	-2.6
2,388,891	-		Psyr_2044	0.89	-2.5
2,388,913	+		Psyr_2044	0.89	-2.5
2,388,913	+		Psyr_2044	0.89	+0.5
2,388,966	-				+3.9
2,388,989	-				+1.7
2,389,032	+				+0.4
2,389,036	+				+0.8
2,389,037	-				+1.2
2,389,183	+				+2.1
2,389,201	+				-1.2
2,389,213	-				-1.8
2,389,250	-				-0.9
2,389,333	-				-1.5
2,389,379	-				-2.8
2,389,431	+				+0.0
2,389,431	+				+1.4
2,389,473	-				+0.4
2,389,473	-				-1.2
2,389,497	+				-1.2
2,389,501	+				+3.2
2,389,520	-				+1.7
2,389,629	-		Psyr_2045	0.47	+2.1
2,389,836	+				-0.1
2,389,836	+				+2.2
2,389,836	+				-0.9
2,389,836	+				+0.8
2,389,836	+				-1.6
2,389,837	-				+1.0
2,389,837	-				+2.0
2,389,939	+				-0.0
2,389,940	-				+1.3
2,390,028	+		Psyr_2046	0.29	-0.6
2,390,028	+		Psyr_2046	0.29	+0.0
2,390,028	+		Psyr_2046	0.29	+0.8
2,390,028	+		Psyr_2046	0.29	-0.3
2,390,029	-		Psyr_2046	0.30	-1.6
2,390,029	-		Psyr_2046	0.30	-0.2
2,390,029	-		Psyr_2046	0.30	+0.8
2,390,029	-		Psyr_2046	0.30	+1.4
2,390,062	+		Psyr_2046	0.59	-1.4
2,390,062	+		Psyr_2046	0.59	-2.2
2,390,062	+		Psyr_2046	0.59	+1.0
2,390,063	-		Psyr_2046	0.60	-2.4
2,390,063	-		Psyr_2046	0.60	+0.5
2,390,063	-		Psyr_2046	0.60	+1.0
2,390,063	-		Psyr_2046	0.60	+1.6
2,390,063	-		Psyr_2046	0.60	-1.4
2,390,063	-		Psyr_2046	0.60	+2.0
2,390,063	-		Psyr_2046	0.60	-2.8
2,390,118	+				-1.8
2,390,124	+				-2.8
2,390,124	+				-1.2
2,390,125	-				-2.8
2,390,125	-				-0.8
2,390,187	+				-0.1
2,390,187	+				-1.7
2,390,188	-				-0.2