Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS18070

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
3,945,217	+				+0.2
3,945,217	+				-1.3
3,945,217	+				-0.9
3,945,217	+				+0.2
3,945,217	+				-0.9
3,945,217	+				+0.0
3,945,217	+				+1.3
3,945,217	+				+1.3
3,945,217	+				-0.8
3,945,217	+				+0.8
3,945,217	+				+1.5
3,945,217	+				-0.8
3,945,218	-				-1.0
3,945,218	-				-0.7
3,945,218	-				+1.9
3,945,218	-				+0.6
3,945,218	-				-0.3
3,945,218	-				+1.0
3,945,218	-				+0.5
3,945,218	-				+1.8
3,945,218	-				+1.3
3,945,218	-				+0.9
3,945,218	-				-0.2
3,945,218	-				-0.0
3,945,218	-				-0.7
3,945,218	-				+0.0
3,945,218	-				+0.3
3,945,218	-				-0.0
3,945,218	-				-1.7
3,945,279	+				+0.7
3,945,279	+				+0.2
3,945,279	+				+0.8
3,945,279	+				+2.0
3,945,279	+				+0.6
3,945,279	+				-0.7
3,945,279	+				+0.3
3,945,279	+				-0.4
3,945,280	-				-0.4
3,945,280	-				-0.1
3,945,280	-				+0.9
3,945,280	-				-0.3
3,945,280	-				+1.3
3,945,280	-				+1.5
3,945,280	-				+0.1
3,945,280	-				-0.5
3,945,280	-				-0.8
3,945,280	-				-0.2
3,945,280	-				+0.8
3,945,286	+				-0.6
3,945,286	+				-0.0
3,945,286	+				-0.6
3,945,286	+				+0.9
3,945,286	+				-0.6
3,945,286	+				+1.0
3,945,286	+				+0.2
3,945,286	+				+0.6
3,945,286	+				+0.5
3,945,286	+				+0.8
3,945,286	+				+0.1
3,945,286	+				-1.2
3,945,286	+				-0.5
3,945,286	+				+1.0
3,945,286	+				-0.2
3,945,286	+				-0.2
3,945,286	+				+0.2
3,945,286	+				+0.2
3,945,286	+				+0.3
3,945,286	+				-1.6
3,945,286	+				-0.0
3,945,286	+				+2.3
3,945,286	+				-1.2
3,945,286	+				+1.2
3,945,287	-				-0.0
3,945,287	-				+1.8
3,945,287	-				+0.0
3,945,287	-				+0.2
3,945,287	-				-2.4
3,945,287	-				+0.7
3,945,287	-				-1.0
3,945,287	-				+1.0
3,945,287	-				-0.4
3,945,287	-				+0.1
3,945,287	-				+0.9
3,945,287	-				+0.0
3,945,287	-				-0.5
3,945,287	-				+0.5
3,945,287	-				-0.3
3,945,287	-				-0.0
3,945,287	-				-0.2
3,945,287	-				+0.2
3,945,287	-				-1.7
3,945,287	-				+0.3
3,945,287	-				-0.2
3,945,287	-				+1.6
3,945,287	-				-1.4
3,945,287	-				-0.2
3,945,287	-				-0.2
3,945,289	+				-0.1
3,945,290	-				+2.0
3,945,496	+		LRK54_RS18070	0.18	-0.5
3,945,496	+		LRK54_RS18070	0.18	+0.3
3,945,497	-		LRK54_RS18070	0.18	+1.0
3,945,497	-		LRK54_RS18070	0.18	+0.3
3,945,607	+		LRK54_RS18070	0.27	-1.9
3,945,607	+		LRK54_RS18070	0.27	-1.1
3,945,607	+		LRK54_RS18070	0.27	+0.1
3,945,608	-		LRK54_RS18070	0.27	+0.3
3,945,608	-		LRK54_RS18070	0.27	+0.2
3,945,608	-		LRK54_RS18070	0.27	+0.6
3,945,608	-		LRK54_RS18070	0.27	-0.8
3,945,608	-		LRK54_RS18070	0.27	+0.2
3,945,608	-		LRK54_RS18070	0.27	+1.3
3,945,608	-		LRK54_RS18070	0.27	-0.4
3,945,709	+		LRK54_RS18070	0.35	+0.1
3,945,709	+		LRK54_RS18070	0.35	+0.6
3,945,709	+		LRK54_RS18070	0.35	+0.1
3,945,709	+		LRK54_RS18070	0.35	+0.1
3,945,709	+		LRK54_RS18070	0.35	+1.6
3,945,709	+		LRK54_RS18070	0.35	+0.5
3,945,709	+		LRK54_RS18070	0.35	-0.0
3,945,709	+		LRK54_RS18070	0.35	-0.5
3,945,709	+		LRK54_RS18070	0.35	+0.3
3,945,709	+		LRK54_RS18070	0.35	+0.9
3,945,709	+		LRK54_RS18070	0.35	+0.1
3,945,709	+		LRK54_RS18070	0.35	+0.4
3,945,709	+		LRK54_RS18070	0.35	+0.4
3,945,709	+		LRK54_RS18070	0.35	+2.0
3,945,709	+		LRK54_RS18070	0.35	-0.2
3,945,709	+		LRK54_RS18070	0.35	+1.4
3,945,710	-		LRK54_RS18070	0.35	-0.2
3,945,710	-		LRK54_RS18070	0.35	+0.5
3,945,710	-		LRK54_RS18070	0.35	+0.3
3,945,710	-		LRK54_RS18070	0.35	-1.2
3,945,710	-		LRK54_RS18070	0.35	+0.3
3,945,710	-		LRK54_RS18070	0.35	-1.0
3,945,710	-		LRK54_RS18070	0.35	-1.4
3,945,710	-		LRK54_RS18070	0.35	+0.5
3,945,710	-		LRK54_RS18070	0.35	-0.6
3,945,710	-		LRK54_RS18070	0.35	+1.0
3,945,710	-		LRK54_RS18070	0.35	+1.2
3,945,710	-		LRK54_RS18070	0.35	+1.1
3,945,710	-		LRK54_RS18070	0.35	-1.4
3,945,710	-		LRK54_RS18070	0.35	+0.0
3,945,710	-		LRK54_RS18070	0.35	-0.0
3,945,710	-		LRK54_RS18070	0.35	-0.3
3,945,772	+		LRK54_RS18070	0.40	-0.6
3,945,787	+		LRK54_RS18070	0.41	-1.2
3,945,787	+		LRK54_RS18070	0.41	-0.0
3,945,787	+		LRK54_RS18070	0.41	-1.4
3,945,787	+		LRK54_RS18070	0.41	-0.8
3,945,787	+		LRK54_RS18070	0.41	-0.1
3,945,787	+		LRK54_RS18070	0.41	+0.6
3,945,787	+		LRK54_RS18070	0.41	+1.2
3,945,787	+		LRK54_RS18070	0.41	+0.3
3,945,787	+		LRK54_RS18070	0.41	-0.6
3,945,787	+		LRK54_RS18070	0.41	+0.1
3,945,787	+		LRK54_RS18070	0.41	+0.8
3,945,788	-		LRK54_RS18070	0.41	-0.2
3,945,788	-		LRK54_RS18070	0.41	+0.2
3,945,788	-		LRK54_RS18070	0.41	+1.8
3,945,788	-		LRK54_RS18070	0.41	-0.2
3,945,788	-		LRK54_RS18070	0.41	+0.8
3,945,823	+		LRK54_RS18070	0.43	-0.4
3,945,823	+		LRK54_RS18070	0.43	-0.1
3,945,823	+		LRK54_RS18070	0.43	-0.5
3,945,823	+		LRK54_RS18070	0.43	+0.8
3,945,823	+		LRK54_RS18070	0.43	+1.3
3,945,823	+		LRK54_RS18070	0.43	+0.3
3,945,823	+		LRK54_RS18070	0.43	-1.6
3,945,823	+		LRK54_RS18070	0.43	-1.6
3,945,823	+		LRK54_RS18070	0.43	-0.8
3,945,823	+		LRK54_RS18070	0.43	-0.1
3,945,823	+		LRK54_RS18070	0.43	-0.5
3,945,823	+		LRK54_RS18070	0.43	+1.0
3,945,823	+		LRK54_RS18070	0.43	+0.1
3,945,823	+		LRK54_RS18070	0.43	+0.9
3,945,823	+		LRK54_RS18070	0.43	+0.5
3,945,823	+		LRK54_RS18070	0.43	-0.4
3,945,823	+		LRK54_RS18070	0.43	-0.2
3,945,823	+		LRK54_RS18070	0.43	-0.8
3,945,823	+		LRK54_RS18070	0.43	+0.0
3,945,824	-		LRK54_RS18070	0.44	-1.7
3,945,824	-		LRK54_RS18070	0.44	+0.4
3,945,824	-		LRK54_RS18070	0.44	-0.5
3,945,824	-		LRK54_RS18070	0.44	-0.2
3,945,824	-		LRK54_RS18070	0.44	+0.4
3,945,824	-		LRK54_RS18070	0.44	+1.7
3,945,824	-		LRK54_RS18070	0.44	-0.1
3,945,824	-		LRK54_RS18070	0.44	-0.1
3,945,824	-		LRK54_RS18070	0.44	-0.8
3,945,824	-		LRK54_RS18070	0.44	+0.4
3,945,824	-		LRK54_RS18070	0.44	+0.0
3,945,824	-		LRK54_RS18070	0.44	-0.1
3,945,824	-		LRK54_RS18070	0.44	+0.4
3,945,824	-		LRK54_RS18070	0.44	-0.4
3,945,824	-		LRK54_RS18070	0.44	+1.1
3,945,824	-		LRK54_RS18070	0.44	+0.9
3,945,927	+		LRK54_RS18070	0.52	+0.6
3,945,928	-		LRK54_RS18070	0.52	+0.0
3,945,979	+		LRK54_RS18070	0.56	+0.4
3,945,979	+		LRK54_RS18070	0.56	-0.6
3,945,980	-		LRK54_RS18070	0.56	+0.0
3,945,980	-		LRK54_RS18070	0.56	+0.9
3,946,033	+		LRK54_RS18070	0.60	+0.2
3,946,033	+		LRK54_RS18070	0.60	-1.1
3,946,033	+		LRK54_RS18070	0.60	+0.4
3,946,033	+		LRK54_RS18070	0.60	+0.2
3,946,033	+		LRK54_RS18070	0.60	+0.2
3,946,033	+		LRK54_RS18070	0.60	-0.5
3,946,033	+		LRK54_RS18070	0.60	-0.1
3,946,033	+		LRK54_RS18070	0.60	+1.1
3,946,033	+		LRK54_RS18070	0.60	-1.2
3,946,033	+		LRK54_RS18070	0.60	+0.2
3,946,033	+		LRK54_RS18070	0.60	+0.1
3,946,033	+		LRK54_RS18070	0.60	+0.8
3,946,033	+		LRK54_RS18070	0.60	+0.8
3,946,033	+		LRK54_RS18070	0.60	+0.6
3,946,033	+		LRK54_RS18070	0.60	+0.4
3,946,033	+		LRK54_RS18070	0.60	+0.5
3,946,033	+		LRK54_RS18070	0.60	+0.7
3,946,033	+		LRK54_RS18070	0.60	+0.6
3,946,033	+		LRK54_RS18070	0.60	-0.1
3,946,033	+		LRK54_RS18070	0.60	-0.1
3,946,033	+		LRK54_RS18070	0.60	+1.3
3,946,033	+		LRK54_RS18070	0.60	-1.0
3,946,033	+		LRK54_RS18070	0.60	+0.1
3,946,033	+		LRK54_RS18070	0.60	-0.8
3,946,033	+		LRK54_RS18070	0.60	+0.6
3,946,033	+		LRK54_RS18070	0.60	+0.8
3,946,033	+		LRK54_RS18070	0.60	+0.2
3,946,033	+		LRK54_RS18070	0.60	+0.4
3,946,033	+		LRK54_RS18070	0.60	-0.6
3,946,034	-		LRK54_RS18070	0.60	+0.9
3,946,034	-		LRK54_RS18070	0.60	-0.7
3,946,034	-		LRK54_RS18070	0.60	+0.8
3,946,034	-		LRK54_RS18070	0.60	-0.1
3,946,034	-		LRK54_RS18070	0.60	-1.0
3,946,034	-		LRK54_RS18070	0.60	-0.4
3,946,034	-		LRK54_RS18070	0.60	+0.5
3,946,034	-		LRK54_RS18070	0.60	-0.8
3,946,034	-		LRK54_RS18070	0.60	+0.8
3,946,034	-		LRK54_RS18070	0.60	+1.2
3,946,034	-		LRK54_RS18070	0.60	-0.9
3,946,034	-		LRK54_RS18070	0.60	-1.1
3,946,034	-		LRK54_RS18070	0.60	+0.5
3,946,034	-		LRK54_RS18070	0.60	+0.5
3,946,034	-		LRK54_RS18070	0.60	-1.5
3,946,034	-		LRK54_RS18070	0.60	+0.9
3,946,034	-		LRK54_RS18070	0.60	+0.7
3,946,034	-		LRK54_RS18070	0.60	-0.2
3,946,034	-		LRK54_RS18070	0.60	-0.8
3,946,034	-		LRK54_RS18070	0.60	-1.0
3,946,034	-		LRK54_RS18070	0.60	-0.7
3,946,034	-		LRK54_RS18070	0.60	-1.4
3,946,034	-		LRK54_RS18070	0.60	+0.9
3,946,034	-		LRK54_RS18070	0.60	-0.3
3,946,034	-		LRK54_RS18070	0.60	-0.7
3,946,034	-		LRK54_RS18070	0.60	+0.1
3,946,034	-		LRK54_RS18070	0.60	+1.5
3,946,034	-		LRK54_RS18070	0.60	-1.0
3,946,034	-		LRK54_RS18070	0.60	+0.4
3,946,034	-		LRK54_RS18070	0.60	-0.8
3,946,034	-		LRK54_RS18070	0.60	-0.6
3,946,034	-		LRK54_RS18070	0.60	+1.1
3,946,099	+		LRK54_RS18070	0.65	+0.7
3,946,099	+		LRK54_RS18070	0.65	-1.1
3,946,099	+		LRK54_RS18070	0.65	+0.7
3,946,099	+		LRK54_RS18070	0.65	+0.0
3,946,099	+		LRK54_RS18070	0.65	+0.4
3,946,099	+		LRK54_RS18070	0.65	-0.8
3,946,099	+		LRK54_RS18070	0.65	-0.9
3,946,099	+		LRK54_RS18070	0.65	+0.0
3,946,099	+		LRK54_RS18070	0.65	-2.1
3,946,099	+		LRK54_RS18070	0.65	-1.0
3,946,099	+		LRK54_RS18070	0.65	-0.5
3,946,100	-		LRK54_RS18070	0.65	+1.5
3,946,100	-		LRK54_RS18070	0.65	-0.6
3,946,100	-		LRK54_RS18070	0.65	+0.2
3,946,100	-		LRK54_RS18070	0.65	+1.3
3,946,100	-		LRK54_RS18070	0.65	-0.7
3,946,100	-		LRK54_RS18070	0.65	+0.8
3,946,100	-		LRK54_RS18070	0.65	+0.1
3,946,100	-		LRK54_RS18070	0.65	+0.0
3,946,100	-		LRK54_RS18070	0.65	-0.7
3,946,100	-		LRK54_RS18070	0.65	-2.2
3,946,100	-		LRK54_RS18070	0.65	-0.3
3,946,100	-		LRK54_RS18070	0.65	-0.5
3,946,100	-		LRK54_RS18070	0.65	-0.2
3,946,100	-		LRK54_RS18070	0.65	-0.8
3,946,100	-		LRK54_RS18070	0.65	+0.9
3,946,123	+		LRK54_RS18070	0.67	-0.8
3,946,123	+		LRK54_RS18070	0.67	-0.0
3,946,123	+		LRK54_RS18070	0.67	+0.5
3,946,123	+		LRK54_RS18070	0.67	+0.6
3,946,123	+		LRK54_RS18070	0.67	-1.4
3,946,123	+		LRK54_RS18070	0.67	+0.1
3,946,123	+		LRK54_RS18070	0.67	-1.3
3,946,123	+		LRK54_RS18070	0.67	-0.7
3,946,123	+		LRK54_RS18070	0.67	-0.2
3,946,123	+		LRK54_RS18070	0.67	+1.6
3,946,123	+		LRK54_RS18070	0.67	+0.8
3,946,123	+		LRK54_RS18070	0.67	+0.9
3,946,123	+		LRK54_RS18070	0.67	+1.0
3,946,124	-		LRK54_RS18070	0.67	-0.5
3,946,124	-		LRK54_RS18070	0.67	+0.1
3,946,124	-		LRK54_RS18070	0.67	-0.0
3,946,124	-		LRK54_RS18070	0.67	+1.3
3,946,124	-		LRK54_RS18070	0.67	-0.4
3,946,124	-		LRK54_RS18070	0.67	+0.8
3,946,124	-		LRK54_RS18070	0.67	+0.1
3,946,124	-		LRK54_RS18070	0.67	+0.5
3,946,124	-		LRK54_RS18070	0.67	+0.5
3,946,124	-		LRK54_RS18070	0.67	+1.0
3,946,124	-		LRK54_RS18070	0.67	-0.3
3,946,124	-		LRK54_RS18070	0.67	+1.0
3,946,124	-		LRK54_RS18070	0.67	+0.5
3,946,124	-		LRK54_RS18070	0.67	+0.7
3,946,124	-		LRK54_RS18070	0.67	+0.6
3,946,126	+		LRK54_RS18070	0.67	+0.6
3,946,126	+		LRK54_RS18070	0.67	+1.3
3,946,126	+		LRK54_RS18070	0.67	+0.8
3,946,126	+		LRK54_RS18070	0.67	-0.3
3,946,126	+		LRK54_RS18070	0.67	-0.1
3,946,127	-		LRK54_RS18070	0.67	-0.2
3,946,127	-		LRK54_RS18070	0.67	-0.7
3,946,127	-		LRK54_RS18070	0.67	-1.1
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