Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS16970

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
3,711,762	+				-0.2
3,711,762	+				+1.7
3,711,762	+				-0.3
3,711,762	+				+0.2
3,711,762	+				-0.7
3,711,762	+				+0.2
3,711,762	+				-0.4
3,711,762	+				-0.5
3,711,762	+				+0.1
3,711,762	+				+0.4
3,711,762	+				-0.3
3,711,762	+				-0.3
3,711,762	+				+0.1
3,711,762	+				+0.3
3,711,762	+				+0.0
3,711,762	+				-0.2
3,711,762	+				-0.6
3,711,762	+				+0.4
3,711,762	+				-0.0
3,711,762	+				-0.0
3,711,762	+				+0.1
3,711,763	-				-2.5
3,711,763	-				-0.7
3,711,763	-				-0.4
3,711,763	-				+0.4
3,711,763	-				-0.0
3,711,763	-				-0.3
3,711,763	-				-0.2
3,711,763	-				+0.1
3,711,763	-				-1.5
3,711,842	+				+0.6
3,711,842	+				-0.4
3,711,842	+				+0.5
3,711,842	+				-0.5
3,711,843	-				+2.5
3,711,843	-				+1.3
3,711,843	-				+0.8
3,711,843	-				-0.2
3,711,843	-				+1.0
3,711,843	-				+0.1
3,711,854	+				+0.1
3,711,854	+				-0.1
3,711,854	+				+0.0
3,711,854	+				-0.6
3,711,854	+				+0.4
3,711,854	+				+0.0
3,711,854	+				-1.7
3,711,854	+				-0.3
3,711,854	+				-1.6
3,711,855	-				+0.3
3,711,855	-				-0.7
3,711,855	-				+0.3
3,711,927	+		LRK54_RS16965	0.19	-0.4
3,711,927	+		LRK54_RS16965	0.19	+0.5
3,711,927	+		LRK54_RS16965	0.19	+1.7
3,711,927	+		LRK54_RS16965	0.19	-1.0
3,711,927	+		LRK54_RS16965	0.19	-0.1
3,711,927	+		LRK54_RS16965	0.19	-0.4
3,711,927	+		LRK54_RS16965	0.19	-0.8
3,711,927	+		LRK54_RS16965	0.19	+0.5
3,711,927	+		LRK54_RS16965	0.19	-1.3
3,711,927	+		LRK54_RS16965	0.19	-0.2
3,711,927	+		LRK54_RS16965	0.19	-0.2
3,711,927	+		LRK54_RS16965	0.19	+0.6
3,711,927	+		LRK54_RS16965	0.19	+0.5
3,711,927	+		LRK54_RS16965	0.19	-0.0
3,711,927	+		LRK54_RS16965	0.19	+1.3
3,711,927	+		LRK54_RS16965	0.19	-0.5
3,711,927	+		LRK54_RS16965	0.19	+0.1
3,711,927	+		LRK54_RS16965	0.19	-0.3
3,711,927	+		LRK54_RS16965	0.19	+0.5
3,711,927	+		LRK54_RS16965	0.19	+1.0
3,711,927	+		LRK54_RS16965	0.19	+0.6
3,711,927	+		LRK54_RS16965	0.19	-0.3
3,711,927	+		LRK54_RS16965	0.19	-1.5
3,711,927	+		LRK54_RS16965	0.19	+0.1
3,711,927	+		LRK54_RS16965	0.19	-0.1
3,711,927	+		LRK54_RS16965	0.19	+0.5
3,711,927	+		LRK54_RS16965	0.19	-0.2
3,711,927	+		LRK54_RS16965	0.19	+0.9
3,711,927	+		LRK54_RS16965	0.19	-0.2
3,711,927	+		LRK54_RS16965	0.19	+1.3
3,711,927	+		LRK54_RS16965	0.19	-0.7
3,711,927	+		LRK54_RS16965	0.19	-0.8
3,711,927	+		LRK54_RS16965	0.19	-0.5
3,711,927	+		LRK54_RS16965	0.19	-0.6
3,711,927	+		LRK54_RS16965	0.19	-0.1
3,711,927	+		LRK54_RS16965	0.19	-0.7
3,711,927	+		LRK54_RS16965	0.19	+0.2
3,711,928	-		LRK54_RS16965	0.19	-1.3
3,711,928	-		LRK54_RS16965	0.19	-0.3
3,711,928	-		LRK54_RS16965	0.19	+1.0
3,711,928	-		LRK54_RS16965	0.19	-0.1
3,711,928	-		LRK54_RS16965	0.19	-1.3
3,711,928	-		LRK54_RS16965	0.19	-1.3
3,711,928	-		LRK54_RS16965	0.19	-1.3
3,711,928	-		LRK54_RS16965	0.19	+0.1
3,711,928	-		LRK54_RS16965	0.19	+2.3
3,711,928	-		LRK54_RS16965	0.19	+0.3
3,711,928	-		LRK54_RS16965	0.19	-0.4
3,711,928	-		LRK54_RS16965	0.19	-0.0
3,711,928	-		LRK54_RS16965	0.19	+1.3
3,711,928	-		LRK54_RS16965	0.19	+0.3
3,711,928	-		LRK54_RS16965	0.19	-0.6
3,711,928	-		LRK54_RS16965	0.19	-0.6
3,711,928	-		LRK54_RS16965	0.19	-0.8
3,711,928	-		LRK54_RS16965	0.19	-0.1
3,711,928	-		LRK54_RS16965	0.19	-1.0
3,711,928	-		LRK54_RS16965	0.19	+0.1
3,711,928	-		LRK54_RS16965	0.19	-0.3
3,711,928	-		LRK54_RS16965	0.19	+0.1
3,711,928	-		LRK54_RS16965	0.19	-0.3
3,711,928	-		LRK54_RS16965	0.19	+2.3
3,711,928	-		LRK54_RS16965	0.19	+0.3
3,711,928	-		LRK54_RS16965	0.19	-0.8
3,711,928	-		LRK54_RS16965	0.19	-0.6
3,711,928	-		LRK54_RS16965	0.19	-0.7
3,711,928	-		LRK54_RS16965	0.19	-0.3
3,711,929	+		LRK54_RS16965	0.19	+1.6
3,711,929	+		LRK54_RS16965	0.19	-0.7
3,711,929	+		LRK54_RS16965	0.19	-0.1
3,711,929	+		LRK54_RS16965	0.19	+0.6
3,711,929	+		LRK54_RS16965	0.19	-1.4
3,711,929	+		LRK54_RS16965	0.19	-0.7
3,711,929	+		LRK54_RS16965	0.19	+0.4
3,711,929	+		LRK54_RS16965	0.19	+0.3
3,711,929	+		LRK54_RS16965	0.19	-1.2
3,711,929	+		LRK54_RS16965	0.19	-1.0
3,711,929	+		LRK54_RS16965	0.19	+1.4
3,711,929	+		LRK54_RS16965	0.19	-0.3
3,711,929	+		LRK54_RS16965	0.19	+0.2
3,711,929	+		LRK54_RS16965	0.19	-0.8
3,711,929	+		LRK54_RS16965	0.19	-0.8
3,711,929	+		LRK54_RS16965	0.19	-0.5
3,711,929	+		LRK54_RS16965	0.19	-0.6
3,711,929	+		LRK54_RS16965	0.19	-0.5
3,711,930	-		LRK54_RS16965	0.20	+0.8
3,711,930	-		LRK54_RS16965	0.20	-0.1
3,711,930	-		LRK54_RS16965	0.20	+0.7
3,711,930	-		LRK54_RS16965	0.20	-0.9
3,711,930	-		LRK54_RS16965	0.20	+0.6
3,711,930	-		LRK54_RS16965	0.20	-1.0
3,711,930	-		LRK54_RS16965	0.20	+0.3
3,711,930	-		LRK54_RS16965	0.20	+0.4
3,711,930	-		LRK54_RS16965	0.20	-0.3
3,711,930	-		LRK54_RS16965	0.20	+1.0
3,711,930	-		LRK54_RS16965	0.20	+0.7
3,711,954	+		LRK54_RS16965	0.26	-1.3
3,711,954	+		LRK54_RS16965	0.26	-0.6
3,711,954	+		LRK54_RS16965	0.26	+0.0
3,711,955	-		LRK54_RS16965	0.26	-1.5
3,711,955	-		LRK54_RS16965	0.26	-0.0
3,711,963	+		LRK54_RS16965	0.28	-0.2
3,711,963	+		LRK54_RS16965	0.28	+0.7
3,711,963	+		LRK54_RS16965	0.28	-0.7
3,711,963	+		LRK54_RS16965	0.28	-1.2
3,711,963	+		LRK54_RS16965	0.28	-0.3
3,711,963	+		LRK54_RS16965	0.28	-1.8
3,711,963	+		LRK54_RS16965	0.28	-0.6
3,711,963	+		LRK54_RS16965	0.28	-0.2
3,711,963	+		LRK54_RS16965	0.28	+2.1
3,711,963	+		LRK54_RS16965	0.28	+0.7
3,711,963	+		LRK54_RS16965	0.28	+1.1
3,711,963	+		LRK54_RS16965	0.28	+0.1
3,711,963	+		LRK54_RS16965	0.28	-0.6
3,711,963	+		LRK54_RS16965	0.28	-0.4
3,711,963	+		LRK54_RS16965	0.28	+0.6
3,711,963	+		LRK54_RS16965	0.28	+0.7
3,711,963	+		LRK54_RS16965	0.28	-1.4
3,711,963	+		LRK54_RS16965	0.28	-0.3
3,711,963	+		LRK54_RS16965	0.28	+0.5
3,711,963	+		LRK54_RS16965	0.28	+0.4
3,711,963	+		LRK54_RS16965	0.28	+0.2
3,711,963	+		LRK54_RS16965	0.28	+0.3
3,711,963	+		LRK54_RS16965	0.28	+0.1
3,711,963	+		LRK54_RS16965	0.28	-0.8
3,711,963	+		LRK54_RS16965	0.28	+1.1
3,711,963	+		LRK54_RS16965	0.28	-0.7
3,711,963	+		LRK54_RS16965	0.28	+0.2
3,711,963	+		LRK54_RS16965	0.28	+0.7
3,711,963	+		LRK54_RS16965	0.28	-0.0
3,711,963	+		LRK54_RS16965	0.28	-0.8
3,711,963	+		LRK54_RS16965	0.28	+0.2
3,711,963	+		LRK54_RS16965	0.28	-0.6
3,711,963	+		LRK54_RS16965	0.28	-0.6
3,711,963	+		LRK54_RS16965	0.28	+0.0
3,711,963	+		LRK54_RS16965	0.28	-0.3
3,711,963	+		LRK54_RS16965	0.28	-0.6
3,711,963	+		LRK54_RS16965	0.28	-1.4
3,711,963	+		LRK54_RS16965	0.28	-0.1
3,711,963	+		LRK54_RS16965	0.28	+0.7
3,711,963	+		LRK54_RS16965	0.28	+0.5
3,711,964	-		LRK54_RS16965	0.28	-0.1
3,711,964	-		LRK54_RS16965	0.28	-0.4
3,711,964	-		LRK54_RS16965	0.28	+0.7
3,711,964	-		LRK54_RS16965	0.28	-1.2
3,711,964	-		LRK54_RS16965	0.28	+1.9
3,711,964	-		LRK54_RS16965	0.28	-0.2
3,711,964	-		LRK54_RS16965	0.28	-0.1
3,711,964	-		LRK54_RS16965	0.28	-1.8
3,711,964	-		LRK54_RS16965	0.28	-0.7
3,711,964	-		LRK54_RS16965	0.28	+0.8
3,711,964	-		LRK54_RS16965	0.28	+1.2
3,711,964	-		LRK54_RS16965	0.28	+1.6
3,711,964	-		LRK54_RS16965	0.28	-0.8
3,711,964	-		LRK54_RS16965	0.28	-0.7
3,711,964	-		LRK54_RS16965	0.28	-1.2
3,711,964	-		LRK54_RS16965	0.28	+0.7
3,711,964	-		LRK54_RS16965	0.28	+0.6
3,711,964	-		LRK54_RS16965	0.28	-0.5
3,711,964	-		LRK54_RS16965	0.28	+1.0
3,711,964	-		LRK54_RS16965	0.28	+1.3
3,711,964	-		LRK54_RS16965	0.28	-1.4
3,711,964	-		LRK54_RS16965	0.28	-0.2
3,711,964	-		LRK54_RS16965	0.28	+0.3
3,711,964	-		LRK54_RS16965	0.28	-0.1
3,711,964	-		LRK54_RS16965	0.28	-0.2
3,711,964	-		LRK54_RS16965	0.28	-1.5
3,711,964	-		LRK54_RS16965	0.28	-1.7
3,711,964	-		LRK54_RS16965	0.28	-0.2
3,711,964	-		LRK54_RS16965	0.28	-1.0
3,711,964	-		LRK54_RS16965	0.28	+1.3
3,711,964	-		LRK54_RS16965	0.28	-2.2
3,711,964	-		LRK54_RS16965	0.28	+2.3
3,711,964	-		LRK54_RS16965	0.28	+0.1
3,711,964	-		LRK54_RS16965	0.28	+0.3
3,711,964	-		LRK54_RS16965	0.28	-0.6
3,711,964	-		LRK54_RS16965	0.28	-0.2
3,711,964	-		LRK54_RS16965	0.28	+0.9
3,711,965	+		LRK54_RS16965	0.29	+0.1
3,711,965	+		LRK54_RS16965	0.29	-1.4
3,711,965	+		LRK54_RS16965	0.29	+0.5
3,711,965	+		LRK54_RS16965	0.29	-0.8
3,711,965	+		LRK54_RS16965	0.29	-0.1
3,711,965	+		LRK54_RS16965	0.29	-0.3
3,711,965	+		LRK54_RS16965	0.29	+0.3
3,711,965	+		LRK54_RS16965	0.29	-0.2
3,711,965	+		LRK54_RS16965	0.29	-1.9
3,711,965	+		LRK54_RS16965	0.29	-0.9
3,711,965	+		LRK54_RS16965	0.29	+0.6
3,711,965	+		LRK54_RS16965	0.29	-0.4
3,711,965	+		LRK54_RS16965	0.29	-0.7
3,711,965	+		LRK54_RS16965	0.29	-0.1
3,711,965	+		LRK54_RS16965	0.29	+0.6
3,711,965	+		LRK54_RS16965	0.29	-0.2
3,711,965	+		LRK54_RS16965	0.29	+0.1
3,711,965	+		LRK54_RS16965	0.29	-1.2
3,711,965	+		LRK54_RS16965	0.29	+0.1
3,711,965	+		LRK54_RS16965	0.29	-0.5
3,711,965	+		LRK54_RS16965	0.29	+0.9
3,711,965	+		LRK54_RS16965	0.29	-0.9
3,711,965	+		LRK54_RS16965	0.29	-0.1
3,711,965	+		LRK54_RS16965	0.29	-1.0
3,711,966	-		LRK54_RS16965	0.29	+0.7
3,711,966	-		LRK54_RS16965	0.29	-0.2
3,711,966	-		LRK54_RS16965	0.29	+0.5
3,711,966	-		LRK54_RS16965	0.29	-0.3
3,711,966	-		LRK54_RS16965	0.29	+0.3
3,711,966	-		LRK54_RS16965	0.29	+1.0
3,711,966	-		LRK54_RS16965	0.29	-1.1
3,711,966	-		LRK54_RS16965	0.29	-0.7
3,711,966	-		LRK54_RS16965	0.29	+0.5
3,711,966	-		LRK54_RS16965	0.29	+1.9
3,711,966	-		LRK54_RS16965	0.29	-0.3
3,711,966	-		LRK54_RS16965	0.29	+0.1
3,711,966	-		LRK54_RS16965	0.29	+0.1
3,711,966	-		LRK54_RS16965	0.29	+0.2
3,711,966	-		LRK54_RS16965	0.29	+0.3
3,711,966	-		LRK54_RS16965	0.29	+1.0
3,711,966	-		LRK54_RS16965	0.29	-0.1
3,711,966	-		LRK54_RS16965	0.29	+1.3
3,711,966	-		LRK54_RS16965	0.29	-0.0
3,711,966	-		LRK54_RS16965	0.29	-0.0
3,711,966	-		LRK54_RS16965	0.29	-0.8
3,711,966	-		LRK54_RS16965	0.29	-0.7
3,712,031	+		LRK54_RS16965	0.46	-0.4
3,712,031	+		LRK54_RS16965	0.46	+1.3
3,712,031	+		LRK54_RS16965	0.46	-0.4
3,712,031	+		LRK54_RS16965	0.46	+1.8
3,712,032	-		LRK54_RS16965	0.46	+1.3
3,712,032	-		LRK54_RS16965	0.46	-0.5
3,712,032	-		LRK54_RS16965	0.46	-2.8
3,712,032	-		LRK54_RS16965	0.46	-0.9
3,712,032	-		LRK54_RS16965	0.46	-0.6
3,712,068	+		LRK54_RS16965	0.55	-0.7
3,712,068	+		LRK54_RS16965	0.55	-2.5
3,712,068	+		LRK54_RS16965	0.55	-1.2
3,712,068	+		LRK54_RS16965	0.55	-0.5
3,712,068	+		LRK54_RS16965	0.55	-0.7
3,712,068	+		LRK54_RS16965	0.55	-1.3
3,712,068	+		LRK54_RS16965	0.55	+0.3
3,712,069	-		LRK54_RS16965	0.56	-0.7
3,712,069	-		LRK54_RS16965	0.56	-0.9
3,712,069	-		LRK54_RS16965	0.56	-0.6
3,712,069	-		LRK54_RS16965	0.56	-0.9
3,712,149	+		LRK54_RS16965	0.77	-1.6
3,712,149	+		LRK54_RS16965	0.77	-0.0
3,712,150	-		LRK54_RS16965	0.77	+0.5
3,712,150	-		LRK54_RS16965	0.77	-0.0
3,712,150	-		LRK54_RS16965	0.77	-1.2
3,712,173	+		LRK54_RS16965	0.83	+0.1
3,712,173	+		LRK54_RS16965	0.83	-0.3
3,712,173	+		LRK54_RS16965	0.83	-0.3
3,712,173	+		LRK54_RS16965	0.83	-1.0
3,712,173	+		LRK54_RS16965	0.83	-1.2
3,712,173	+		LRK54_RS16965	0.83	-1.6
3,712,173	+		LRK54_RS16965	0.83	-1.5
3,712,173	+		LRK54_RS16965	0.83	+0.1
3,712,173	+		LRK54_RS16965	0.83	-0.9
3,712,173	+		LRK54_RS16965	0.83	-1.1
3,712,173	+		LRK54_RS16965	0.83	+0.4
3,712,173	+		LRK54_RS16965	0.83	-0.3
3,712,173	+		LRK54_RS16965	0.83	-0.4
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