Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS16575

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
3,639,222	+				-0.8
3,639,222	+				+1.8
3,639,222	+				-1.0
3,639,222	+				+0.2
3,639,222	+				-0.4
3,639,222	+				-0.8
3,639,222	+				-0.5
3,639,222	+				-0.8
3,639,222	+				-1.0
3,639,222	+				-0.1
3,639,223	-				-1.0
3,639,223	-				-0.6
3,639,223	-				-0.9
3,639,223	-				+0.5
3,639,223	-				+0.3
3,639,223	-				-1.6
3,639,223	-				-0.2
3,639,223	-				-1.7
3,639,223	-				-0.1
3,639,223	-				-0.6
3,639,223	-				+0.2
3,639,223	-				-0.7
3,639,223	-				-1.1
3,639,223	-				+1.1
3,639,266	-				+0.3
3,639,266	-				-0.6
3,639,266	-				-0.5
3,639,285	+				-0.4
3,639,285	+				-0.1
3,639,285	+				-2.0
3,639,285	+				-0.1
3,639,285	+				-1.3
3,639,285	+				+0.1
3,639,285	+				-1.4
3,639,285	+				+0.2
3,639,285	+				-0.9
3,639,285	+				-0.2
3,639,285	+				-1.1
3,639,285	+				-0.7
3,639,285	+				-1.4
3,639,285	+				-1.7
3,639,285	+				+0.7
3,639,285	+				-2.3
3,639,285	+				-0.4
3,639,285	+				-0.1
3,639,285	+				-1.3
3,639,286	-				-1.0
3,639,286	-				+0.7
3,639,286	-				+0.7
3,639,286	-				-0.1
3,639,286	-				-0.6
3,639,286	-				+0.3
3,639,286	-				+0.8
3,639,286	-				-0.1
3,639,286	-				+1.5
3,639,286	-				+0.2
3,639,286	-				-0.2
3,639,286	-				-2.8
3,639,286	-				-1.2
3,639,286	-				-0.6
3,639,286	-				-0.1
3,639,286	-				-1.0
3,639,509	+		LRK54_RS16570	0.38	+0.3
3,639,509	+		LRK54_RS16570	0.38	-0.7
3,639,509	+		LRK54_RS16570	0.38	-0.4
3,639,509	+		LRK54_RS16570	0.38	-0.7
3,639,509	+		LRK54_RS16570	0.38	+0.6
3,639,510	-		LRK54_RS16570	0.38	-0.6
3,639,510	-		LRK54_RS16570	0.38	-1.2
3,639,510	-		LRK54_RS16570	0.38	+0.3
3,639,510	-		LRK54_RS16570	0.38	+0.3
3,639,510	-		LRK54_RS16570	0.38	-1.2
3,639,510	-		LRK54_RS16570	0.38	+1.0
3,639,510	-		LRK54_RS16570	0.38	-0.8
3,639,510	-		LRK54_RS16570	0.38	-0.3
3,639,510	-		LRK54_RS16570	0.38	+1.0
3,639,510	-		LRK54_RS16570	0.38	-0.7
3,639,535	+		LRK54_RS16570	0.41	-0.3
3,639,682	+		LRK54_RS16570	0.60	-0.3
3,639,682	+		LRK54_RS16570	0.60	-1.3
3,639,682	+		LRK54_RS16570	0.60	-0.1
3,639,682	+		LRK54_RS16570	0.60	-1.6
3,639,682	+		LRK54_RS16570	0.60	-0.6
3,639,682	+		LRK54_RS16570	0.60	-0.5
3,639,682	+		LRK54_RS16570	0.60	+1.0
3,639,682	+		LRK54_RS16570	0.60	-0.5
3,639,682	+		LRK54_RS16570	0.60	+0.1
3,639,682	+		LRK54_RS16570	0.60	-0.9
3,639,682	+		LRK54_RS16570	0.60	-0.1
3,639,682	+		LRK54_RS16570	0.60	-1.5
3,639,682	+		LRK54_RS16570	0.60	+2.3
3,639,682	+		LRK54_RS16570	0.60	-0.1
3,639,682	+		LRK54_RS16570	0.60	-0.7
3,639,682	+		LRK54_RS16570	0.60	-0.1
3,639,682	+		LRK54_RS16570	0.60	+0.2
3,639,682	+		LRK54_RS16570	0.60	-0.5
3,639,682	+		LRK54_RS16570	0.60	-0.7
3,639,682	+		LRK54_RS16570	0.60	+1.7
3,639,682	+		LRK54_RS16570	0.60	-1.3
3,639,682	+		LRK54_RS16570	0.60	+0.4
3,639,682	+		LRK54_RS16570	0.60	+0.2
3,639,682	+		LRK54_RS16570	0.60	+0.3
3,639,682	+		LRK54_RS16570	0.60	+0.5
3,639,682	+		LRK54_RS16570	0.60	+1.1
3,639,682	+		LRK54_RS16570	0.60	-1.1
3,639,682	+		LRK54_RS16570	0.60	+0.0
3,639,682	+		LRK54_RS16570	0.60	-0.2
3,639,682	+		LRK54_RS16570	0.60	-0.7
3,639,682	+		LRK54_RS16570	0.60	+0.4
3,639,682	+		LRK54_RS16570	0.60	-0.1
3,639,682	+		LRK54_RS16570	0.60	-0.1
3,639,682	+		LRK54_RS16570	0.60	+1.6
3,639,683	-		LRK54_RS16570	0.60	+1.0
3,639,683	-		LRK54_RS16570	0.60	+0.4
3,639,683	-		LRK54_RS16570	0.60	-1.3
3,639,683	-		LRK54_RS16570	0.60	-0.8
3,639,683	-		LRK54_RS16570	0.60	+0.6
3,639,683	-		LRK54_RS16570	0.60	+1.5
3,639,683	-		LRK54_RS16570	0.60	-0.4
3,639,683	-		LRK54_RS16570	0.60	-0.9
3,639,683	-		LRK54_RS16570	0.60	-0.6
3,639,683	-		LRK54_RS16570	0.60	-2.6
3,639,683	-		LRK54_RS16570	0.60	+0.6
3,639,683	-		LRK54_RS16570	0.60	-0.1
3,639,683	-		LRK54_RS16570	0.60	+0.3
3,639,683	-		LRK54_RS16570	0.60	-0.4
3,639,683	-		LRK54_RS16570	0.60	+0.3
3,639,683	-		LRK54_RS16570	0.60	+0.2
3,639,683	-		LRK54_RS16570	0.60	-0.8
3,639,683	-		LRK54_RS16570	0.60	-1.1
3,639,683	-		LRK54_RS16570	0.60	-0.1
3,639,683	-		LRK54_RS16570	0.60	+0.5
3,639,683	-		LRK54_RS16570	0.60	-1.2
3,639,683	-		LRK54_RS16570	0.60	-0.8
3,639,683	-		LRK54_RS16570	0.60	-0.3
3,639,683	-		LRK54_RS16570	0.60	+1.1
3,639,683	-		LRK54_RS16570	0.60	-0.5
3,639,683	-		LRK54_RS16570	0.60	-0.8
3,639,683	-		LRK54_RS16570	0.60	+2.3
3,639,683	-		LRK54_RS16570	0.60	-2.2
3,639,724	+		LRK54_RS16570	0.65	+0.8
3,639,724	+		LRK54_RS16570	0.65	+0.2
3,639,724	+		LRK54_RS16570	0.65	-0.4
3,639,724	+		LRK54_RS16570	0.65	-1.2
3,639,724	+		LRK54_RS16570	0.65	+0.0
3,639,724	+		LRK54_RS16570	0.65	+0.3
3,639,724	+		LRK54_RS16570	0.65	+1.3
3,639,724	+		LRK54_RS16570	0.65	+0.6
3,639,724	+		LRK54_RS16570	0.65	-0.1
3,639,724	+		LRK54_RS16570	0.65	-0.2
3,639,724	+		LRK54_RS16570	0.65	+1.3
3,639,724	+		LRK54_RS16570	0.65	-0.1
3,639,724	+		LRK54_RS16570	0.65	-0.4
3,639,724	+		LRK54_RS16570	0.65	-1.0
3,639,724	+		LRK54_RS16570	0.65	+1.0
3,639,724	+		LRK54_RS16570	0.65	-1.2
3,639,724	+		LRK54_RS16570	0.65	-2.0
3,639,724	+		LRK54_RS16570	0.65	-0.7
3,639,724	+		LRK54_RS16570	0.65	-0.6
3,639,724	+		LRK54_RS16570	0.65	-0.6
3,639,724	+		LRK54_RS16570	0.65	-0.3
3,639,724	+		LRK54_RS16570	0.65	+0.4
3,639,724	+		LRK54_RS16570	0.65	-0.8
3,639,724	+		LRK54_RS16570	0.65	-1.1
3,639,724	+		LRK54_RS16570	0.65	-2.3
3,639,724	+		LRK54_RS16570	0.65	-0.2
3,639,724	+		LRK54_RS16570	0.65	+0.3
3,639,724	+		LRK54_RS16570	0.65	+0.7
3,639,724	+		LRK54_RS16570	0.65	-1.4
3,639,724	+		LRK54_RS16570	0.65	-0.7
3,639,725	-		LRK54_RS16570	0.65	-2.4
3,639,725	-		LRK54_RS16570	0.65	-0.6
3,639,725	-		LRK54_RS16570	0.65	-2.5
3,639,725	-		LRK54_RS16570	0.65	+0.3
3,639,725	-		LRK54_RS16570	0.65	-1.3
3,639,725	-		LRK54_RS16570	0.65	-1.4
3,639,725	-		LRK54_RS16570	0.65	-0.3
3,639,725	-		LRK54_RS16570	0.65	-2.9
3,639,725	-		LRK54_RS16570	0.65	+0.5
3,639,725	-		LRK54_RS16570	0.65	-0.4
3,639,725	-		LRK54_RS16570	0.65	-1.2
3,639,725	-		LRK54_RS16570	0.65	+0.9
3,639,725	-		LRK54_RS16570	0.65	-1.5
3,639,725	-		LRK54_RS16570	0.65	-0.3
3,639,725	-		LRK54_RS16570	0.65	-0.2
3,639,725	-		LRK54_RS16570	0.65	-0.1
3,639,725	-		LRK54_RS16570	0.65	-1.6
3,639,725	-		LRK54_RS16570	0.65	-0.9
3,639,725	-		LRK54_RS16570	0.65	+0.3
3,639,725	-		LRK54_RS16570	0.65	-1.2
3,639,725	-		LRK54_RS16570	0.65	-0.9
3,639,725	-		LRK54_RS16570	0.65	+1.1
3,639,725	-		LRK54_RS16570	0.65	-1.9
3,639,740	-		LRK54_RS16570	0.67	+0.1
3,639,740	-		LRK54_RS16570	0.67	-1.6
3,639,740	-		LRK54_RS16570	0.67	-0.4
3,639,805	+		LRK54_RS16570	0.76	-0.2
3,639,805	+		LRK54_RS16570	0.76	+1.0
3,639,805	+		LRK54_RS16570	0.76	-1.1
3,639,806	-		LRK54_RS16570	0.76	-0.3
3,639,806	-		LRK54_RS16570	0.76	-0.1
3,639,913	+		LRK54_RS16570	0.90	-0.6
3,639,913	+		LRK54_RS16570	0.90	-1.8
3,639,913	+		LRK54_RS16570	0.90	-1.1
3,639,913	+		LRK54_RS16570	0.90	-0.5
3,639,913	+		LRK54_RS16570	0.90	-0.2
3,639,913	+		LRK54_RS16570	0.90	-2.9
3,639,913	+		LRK54_RS16570	0.90	+0.5
3,639,913	+		LRK54_RS16570	0.90	+0.5
3,639,913	+		LRK54_RS16570	0.90	-0.1
3,639,913	+		LRK54_RS16570	0.90	-0.4
3,639,913	+		LRK54_RS16570	0.90	+0.5
3,639,913	+		LRK54_RS16570	0.90	-0.6
3,639,913	+		LRK54_RS16570	0.90	-0.1
3,639,913	+		LRK54_RS16570	0.90	+1.3
3,639,913	+		LRK54_RS16570	0.90	-2.3
3,639,913	+		LRK54_RS16570	0.90	-0.2
3,639,913	+		LRK54_RS16570	0.90	+0.3
3,639,913	+		LRK54_RS16570	0.90	+0.3
3,639,913	+		LRK54_RS16570	0.90	-0.3
3,639,913	+		LRK54_RS16570	0.90	-0.7
3,639,913	+		LRK54_RS16570	0.90	-2.1
3,639,913	+		LRK54_RS16570	0.90	+0.4
3,639,914	-		LRK54_RS16570	0.90	-0.8
3,639,914	-		LRK54_RS16570	0.90	-0.4
3,639,914	-		LRK54_RS16570	0.90	+0.3
3,639,914	-		LRK54_RS16570	0.90	+1.3
3,639,914	-		LRK54_RS16570	0.90	-0.9
3,639,914	-		LRK54_RS16570	0.90	-0.4
3,639,914	-		LRK54_RS16570	0.90	-0.2
3,639,914	-		LRK54_RS16570	0.90	-2.6
3,639,914	-		LRK54_RS16570	0.90	+0.5
3,639,914	-		LRK54_RS16570	0.90	+1.9
3,639,914	-		LRK54_RS16570	0.90	-0.1
3,639,914	-		LRK54_RS16570	0.90	-0.3
3,639,914	-		LRK54_RS16570	0.90	+0.3
3,639,915	+		LRK54_RS16570	0.90	-1.5
3,639,915	+		LRK54_RS16570	0.90	-1.9
3,639,915	+		LRK54_RS16570	0.90	+0.7
3,639,915	+		LRK54_RS16570	0.90	-0.9
3,639,915	+		LRK54_RS16570	0.90	-0.8
3,639,915	+		LRK54_RS16570	0.90	-0.8
3,639,915	+		LRK54_RS16570	0.90	+0.4
3,639,915	+		LRK54_RS16570	0.90	-0.6
3,639,915	+		LRK54_RS16570	0.90	-0.7
3,639,915	+		LRK54_RS16570	0.90	+0.3
3,639,915	+		LRK54_RS16570	0.90	-0.1
3,639,915	+		LRK54_RS16570	0.90	-0.1
3,639,915	+		LRK54_RS16570	0.90	+0.5
3,639,915	+		LRK54_RS16570	0.90	+0.5
3,639,915	+		LRK54_RS16570	0.90	-0.2
3,639,915	+		LRK54_RS16570	0.90	-1.5
3,639,915	+		LRK54_RS16570	0.90	+1.3
3,639,915	+		LRK54_RS16570	0.90	+0.2
3,639,915	+		LRK54_RS16570	0.90	+0.0
3,639,915	+		LRK54_RS16570	0.90	+0.7
3,639,915	+		LRK54_RS16570	0.90	-1.6
3,639,915	+		LRK54_RS16570	0.90	+0.8
3,639,915	+		LRK54_RS16570	0.90	-0.8
3,639,915	+		LRK54_RS16570	0.90	-0.1
3,639,915	+		LRK54_RS16570	0.90	-1.7
3,639,915	+		LRK54_RS16570	0.90	+0.5
3,639,915	+		LRK54_RS16570	0.90	-0.4
3,639,915	+		LRK54_RS16570	0.90	+0.3
3,639,915	+		LRK54_RS16570	0.90	-0.2
3,639,915	+		LRK54_RS16570	0.90	-0.8
3,639,915	+		LRK54_RS16570	0.90	+0.1
3,639,916	-				-1.1
3,639,916	-				-0.8
3,639,916	-				-2.1
3,639,916	-				-0.3
3,639,916	-				-1.0
3,639,916	-				+0.3
3,639,916	-				-0.1
3,639,916	-				-0.5
3,639,916	-				+0.1
3,639,916	-				-0.9
3,639,916	-				-0.9
3,639,916	-				-0.1
3,639,916	-				-1.1
3,639,916	-				+0.9
3,639,916	-				-0.5
3,639,916	-				-0.5
3,639,916	-				-1.4
3,639,916	-				-1.5
3,639,916	-				-0.7
3,639,916	-				-1.4
3,639,916	-				-1.7
3,639,916	-				+0.3
3,639,916	-				-0.3
3,639,916	-				+2.3
3,639,916	-				+0.0
3,639,916	-				+0.9
3,639,916	-				-0.9
3,640,045	+				+1.1
3,640,045	+				-1.7
3,640,045	+				+4.3
3,640,045	+				+1.3
3,640,045	+				-1.8
3,640,046	-				+0.0
3,640,046	-				+1.3
3,640,046	-				-0.5
3,640,046	-				+0.4
3,640,046	-				-0.5
3,640,046	-				+0.2
3,640,046	-				-0.2
3,640,046	-				+1.3
3,640,046	-				-0.7
3,640,046	-				-0.2
3,640,046	-				-1.2
3,640,046	-				-0.1
3,640,046	-				+0.7
3,640,046	-				-0.3
3,640,046	-				+1.0
3,640,115	+				-0.1
3,640,115	+				-0.9
3,640,115	+				+1.4
3,640,115	+				+0.3
3,640,256	+				+1.3
3,640,256	+				+0.6
3,640,256	+				-0.1
3,640,256	+				-0.8
3,640,256	+				+0.2
3,640,256	+				-1.4
3,640,256	+				+0.5
3,640,256	+				+0.5
3,640,257	-				+0.3
3,640,257	-				-0.7
3,640,257	-				+0.9
3,640,257	-				+0.3
3,640,257	-				+0.3
3,640,304	+				+0.4
3,640,304	+				+0.4
3,640,304	+				+0.5
3,640,304	+				+0.5
3,640,304	+				+1.0
3,640,304	+				-0.9
3,640,304	+				+0.2
3,640,304	+				+0.2
3,640,304	+				+0.5
3,640,304	+				-1.2
3,640,304	+				+1.9
3,640,304	+				+0.5
3,640,304	+				+1.7
3,640,304	+				+0.3
3,640,304	+				+0.5
3,640,304	+				+0.6
3,640,304	+				-0.4
3,640,304	+				+0.5
3,640,304	+				+0.2
3,640,304	+				+0.8
3,640,304	+				+1.2
3,640,305	-				+0.5
3,640,305	-				-0.3
3,640,305	-				+0.4
3,640,305	-				-0.7
3,640,305	-				+1.3
3,640,305	-				+0.3
3,640,305	-				+0.9
3,640,305	-				+0.5
3,640,305	-				+0.2
3,640,305	-				-0.2
3,640,305	-				+0.5
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3,642,144	+		LRK54_RS16575	0.76	-1.1
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