Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS13625

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
3,045,674	+		LRK54_RS13615	0.36	+0.6
3,045,674	+		LRK54_RS13615	0.36	-1.8
3,045,674	+		LRK54_RS13615	0.36	+0.1
3,045,674	+		LRK54_RS13615	0.36	+0.3
3,045,674	+		LRK54_RS13615	0.36	+0.1
3,045,675	-		LRK54_RS13615	0.37	+1.2
3,045,675	-		LRK54_RS13615	0.37	+0.0
3,045,675	-		LRK54_RS13615	0.37	-1.5
3,045,675	-		LRK54_RS13615	0.37	-0.4
3,045,682	+		LRK54_RS13615	0.39	+0.4
3,045,682	+		LRK54_RS13615	0.39	-1.9
3,045,682	+		LRK54_RS13615	0.39	-0.7
3,045,683	-		LRK54_RS13615	0.39	-0.4
3,045,683	-		LRK54_RS13615	0.39	-0.1
3,045,683	-		LRK54_RS13615	0.39	-1.6
3,045,683	-		LRK54_RS13615	0.39	+0.6
3,045,779	+		LRK54_RS13615	0.66	+0.3
3,045,779	+		LRK54_RS13615	0.66	-1.1
3,045,779	+		LRK54_RS13615	0.66	+3.2
3,045,779	+		LRK54_RS13615	0.66	-0.2
3,045,780	-		LRK54_RS13615	0.66	+1.5
3,045,780	-		LRK54_RS13615	0.66	-1.4
3,045,780	-		LRK54_RS13615	0.66	+2.2
3,045,780	-		LRK54_RS13615	0.66	+0.9
3,045,780	-		LRK54_RS13615	0.66	-0.7
3,045,780	-		LRK54_RS13615	0.66	-0.3
3,045,954	+				-0.9
3,045,955	-				-1.6
3,045,987	+		LRK54_RS13620	0.20	-0.1
3,045,988	-		LRK54_RS13620	0.21	+1.2
3,045,988	-		LRK54_RS13620	0.21	+0.3
3,045,988	-		LRK54_RS13620	0.21	-0.9
3,045,988	-		LRK54_RS13620	0.21	-0.6
3,046,973	-		LRK54_RS13625	0.69	+1.4
3,047,018	+		LRK54_RS13625	0.73	+1.2
3,047,019	-		LRK54_RS13625	0.73	-0.1
3,047,019	-		LRK54_RS13625	0.73	-0.6
3,047,019	-		LRK54_RS13625	0.73	-0.5
3,047,019	-		LRK54_RS13625	0.73	+0.6
3,047,019	-		LRK54_RS13625	0.73	-0.4
3,047,442	-				+0.5
3,047,442	-				+1.2
3,047,466	-				-0.5
3,047,886	-				+1.0
3,048,082	+		LRK54_RS13635	0.60	+0.1
3,048,082	+		LRK54_RS13635	0.60	+0.1
3,048,082	+		LRK54_RS13635	0.60	-0.8
3,048,082	+		LRK54_RS13635	0.60	+1.6
3,048,082	+		LRK54_RS13635	0.60	-0.3
3,048,082	+		LRK54_RS13635	0.60	-0.1
3,048,082	+		LRK54_RS13635	0.60	-0.9
3,048,082	+		LRK54_RS13635	0.60	+0.2
3,048,082	+		LRK54_RS13635	0.60	+0.4
3,048,083	-		LRK54_RS13635	0.60	-0.5
3,048,083	-		LRK54_RS13635	0.60	+0.3
3,048,083	-		LRK54_RS13635	0.60	-0.8
3,048,083	-		LRK54_RS13635	0.60	-1.1
3,048,083	-		LRK54_RS13635	0.60	-1.0
3,048,083	-		LRK54_RS13635	0.60	-1.1