Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS13505

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
3,024,309	+		LRK54_RS13500	0.24	+2.2
3,024,309	+		LRK54_RS13500	0.24	+0.9
3,024,309	+		LRK54_RS13500	0.24	-0.4
3,024,309	+		LRK54_RS13500	0.24	+0.8
3,024,309	+		LRK54_RS13500	0.24	+0.5
3,024,309	+		LRK54_RS13500	0.24	+1.2
3,024,309	+		LRK54_RS13500	0.24	+0.2
3,024,309	+		LRK54_RS13500	0.24	-1.1
3,024,309	+		LRK54_RS13500	0.24	+0.3
3,024,309	+		LRK54_RS13500	0.24	-0.4
3,024,309	+		LRK54_RS13500	0.24	-0.6
3,024,309	+		LRK54_RS13500	0.24	+0.3
3,024,309	+		LRK54_RS13500	0.24	+1.0
3,024,309	+		LRK54_RS13500	0.24	+0.0
3,024,309	+		LRK54_RS13500	0.24	+3.2
3,024,309	+		LRK54_RS13500	0.24	-0.4
3,024,309	+		LRK54_RS13500	0.24	-0.9
3,024,309	+		LRK54_RS13500	0.24	+0.6
3,024,309	+		LRK54_RS13500	0.24	+0.9
3,024,309	+		LRK54_RS13500	0.24	-0.8
3,024,309	+		LRK54_RS13500	0.24	+1.0
3,024,309	+		LRK54_RS13500	0.24	+0.0
3,024,309	+		LRK54_RS13500	0.24	-0.4
3,024,310	-		LRK54_RS13500	0.24	-0.3
3,024,310	-		LRK54_RS13500	0.24	+0.4
3,024,310	-		LRK54_RS13500	0.24	+1.0
3,024,310	-		LRK54_RS13500	0.24	+0.1
3,024,310	-		LRK54_RS13500	0.24	+0.1
3,024,310	-		LRK54_RS13500	0.24	+0.8
3,024,310	-		LRK54_RS13500	0.24	-1.4
3,024,310	-		LRK54_RS13500	0.24	-0.1
3,024,310	-		LRK54_RS13500	0.24	+0.7
3,024,310	-		LRK54_RS13500	0.24	+1.2
3,024,310	-		LRK54_RS13500	0.24	+0.2
3,024,310	-		LRK54_RS13500	0.24	+3.0
3,024,310	-		LRK54_RS13500	0.24	+0.6
3,024,310	-		LRK54_RS13500	0.24	+0.4
3,024,310	-		LRK54_RS13500	0.24	+1.1
3,024,310	-		LRK54_RS13500	0.24	-0.3
3,024,310	-		LRK54_RS13500	0.24	-0.2
3,024,310	-		LRK54_RS13500	0.24	-0.0
3,024,523	-		LRK54_RS13500	0.45	+0.3
3,024,523	-		LRK54_RS13500	0.45	+0.1
3,024,638	+		LRK54_RS13500	0.56	-0.1
3,024,638	+		LRK54_RS13500	0.56	-0.6
3,024,639	-		LRK54_RS13500	0.56	+0.6
3,024,639	-		LRK54_RS13500	0.56	+0.6
3,024,639	-		LRK54_RS13500	0.56	-0.3
3,024,724	-		LRK54_RS13500	0.65	+0.7
3,025,316	+		LRK54_RS13505	0.38	-0.3
3,025,316	+		LRK54_RS13505	0.38	+0.9
3,025,316	+		LRK54_RS13505	0.38	+0.3
3,025,316	+		LRK54_RS13505	0.38	+0.2
3,025,316	+		LRK54_RS13505	0.38	-0.3
3,025,317	-		LRK54_RS13505	0.38	+1.2
3,025,317	-		LRK54_RS13505	0.38	+1.2
3,025,317	-		LRK54_RS13505	0.38	+0.5
3,025,317	-		LRK54_RS13505	0.38	-0.3
3,025,317	-		LRK54_RS13505	0.38	+0.6
3,025,721	+				-0.4
3,025,721	+				+0.0
3,025,766	+				+1.4
3,025,766	+				-0.1
3,025,766	+				-0.8
3,025,766	+				-0.2
3,025,767	-				+0.0
3,025,767	-				-0.8
3,025,853	+				-0.6
3,025,853	+				-0.8
3,025,853	+				-0.3
3,025,854	-				-0.8
3,026,115	+		LRK54_RS13510	0.22	+0.8
3,026,397	+		LRK54_RS13510	0.42	-0.1
3,026,397	+		LRK54_RS13510	0.42	-1.6
3,026,397	+		LRK54_RS13510	0.42	+1.1
3,026,398	-		LRK54_RS13510	0.42	+0.5
3,026,398	-		LRK54_RS13510	0.42	+0.4
3,026,559	+		LRK54_RS13510	0.54	-1.3
3,026,559	+		LRK54_RS13510	0.54	+0.3