Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS12495

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
2,786,307	+		LRK54_RS12490	0.48	+0.4
2,786,307	+		LRK54_RS12490	0.48	-0.8
2,786,308	-		LRK54_RS12490	0.48	-1.4
2,786,308	-		LRK54_RS12490	0.48	+1.2
2,786,308	-		LRK54_RS12490	0.48	-0.5
2,786,454	+		LRK54_RS12490	0.61	+0.4
2,786,454	+		LRK54_RS12490	0.61	+0.8
2,786,454	+		LRK54_RS12490	0.61	+0.7
2,786,454	+		LRK54_RS12490	0.61	-0.4
2,786,455	-		LRK54_RS12490	0.61	+2.0
2,786,455	-		LRK54_RS12490	0.61	+0.2
2,786,455	-		LRK54_RS12490	0.61	+0.2
2,786,455	-		LRK54_RS12490	0.61	+0.2
2,786,463	+		LRK54_RS12490	0.62	+0.2
2,786,464	-		LRK54_RS12490	0.62	-0.3
2,786,464	-		LRK54_RS12490	0.62	+0.4
2,786,464	-		LRK54_RS12490	0.62	+1.2
2,786,652	+		LRK54_RS12490	0.79	-0.6
2,786,652	+		LRK54_RS12490	0.79	+0.9
2,786,652	+		LRK54_RS12490	0.79	+0.4
2,786,652	+		LRK54_RS12490	0.79	-0.3
2,786,652	+		LRK54_RS12490	0.79	+1.7
2,786,652	+		LRK54_RS12490	0.79	+0.2
2,786,652	+		LRK54_RS12490	0.79	-0.9
2,786,652	+		LRK54_RS12490	0.79	+0.1
2,786,653	-		LRK54_RS12490	0.79	-0.0
2,786,653	-		LRK54_RS12490	0.79	+0.6
2,786,760	+		LRK54_RS12490	0.88	+0.7
2,786,760	+		LRK54_RS12490	0.88	+1.7
2,786,760	+		LRK54_RS12490	0.88	+0.1
2,786,760	+		LRK54_RS12490	0.88	+0.2
2,786,761	-		LRK54_RS12490	0.88	-1.5
2,786,761	-		LRK54_RS12490	0.88	+1.5
2,786,761	-		LRK54_RS12490	0.88	+1.5
2,786,761	-		LRK54_RS12490	0.88	+0.7
2,786,761	-		LRK54_RS12490	0.88	+0.9
2,786,761	-		LRK54_RS12490	0.88	+1.1
2,787,185	+		LRK54_RS12495	0.28	-0.3
2,787,185	+		LRK54_RS12495	0.28	+2.0
2,787,185	+		LRK54_RS12495	0.28	+1.0
2,787,185	+		LRK54_RS12495	0.28	+0.8
2,787,185	+		LRK54_RS12495	0.28	+3.6
2,787,185	+		LRK54_RS12495	0.28	+0.0
2,787,185	+		LRK54_RS12495	0.28	+1.5
2,787,185	+		LRK54_RS12495	0.28	+0.5
2,787,185	+		LRK54_RS12495	0.28	+0.3
2,787,185	+		LRK54_RS12495	0.28	+0.5
2,787,185	+		LRK54_RS12495	0.28	-0.2
2,787,185	+		LRK54_RS12495	0.28	-0.1
2,787,186	-		LRK54_RS12495	0.28	-0.3
2,787,186	-		LRK54_RS12495	0.28	-0.3
2,787,186	-				+1.2
2,787,186	-		LRK54_RS12495	0.28	+0.7
2,787,186	-		LRK54_RS12495	0.28	+0.2
2,787,186	-		LRK54_RS12495	0.28	+0.9
2,787,186	-		LRK54_RS12495	0.28	+0.4
2,787,186	-		LRK54_RS12495	0.28	-0.8
2,787,186	-		LRK54_RS12495	0.28	+2.2
2,787,186	-		LRK54_RS12495	0.28	+1.2
2,787,186	-		LRK54_RS12495	0.28	+1.2
2,787,186	-		LRK54_RS12495	0.28	+0.0
2,787,186	-		LRK54_RS12495	0.28	-0.5
2,787,401	+		LRK54_RS12495	0.50	-0.2
2,787,401	+		LRK54_RS12495	0.50	+0.0
2,787,401	+		LRK54_RS12495	0.50	+0.7
2,787,401	+		LRK54_RS12495	0.50	-0.9
2,787,401	+		LRK54_RS12495	0.50	+0.0
2,787,401	+		LRK54_RS12495	0.50	-0.7
2,787,401	+		LRK54_RS12495	0.50	+2.2
2,787,402	-		LRK54_RS12495	0.50	+0.7
2,787,402	-		LRK54_RS12495	0.50	-0.7
2,787,402	-		LRK54_RS12495	0.50	+1.6
2,787,402	-		LRK54_RS12495	0.50	+0.7
2,787,402	-		LRK54_RS12495	0.50	-0.2
2,787,402	-		LRK54_RS12495	0.50	+1.7
2,787,402	-		LRK54_RS12495	0.50	+2.0
2,787,402	-		LRK54_RS12495	0.50	+0.1
2,787,620	+		LRK54_RS12495	0.72	+0.3
2,787,620	+		LRK54_RS12495	0.72	-1.4
2,787,621	-		LRK54_RS12495	0.72	+0.7
2,787,621	-		LRK54_RS12495	0.72	-0.1
2,787,921	+				-0.9
2,787,921	+				-1.4
2,787,921	+				-1.7
2,787,921	+				+0.5
2,787,922	-				-0.7
2,787,922	-				+0.4
2,787,922	-				-0.1
2,787,922	-				+0.2
2,787,922	-				+0.3
2,788,014	+				+1.0
2,788,390	-		LRK54_RS12500	0.27	+0.3
2,788,390	-		LRK54_RS12500	0.27	+0.7
2,788,390	-		LRK54_RS12500	0.27	-0.0
2,788,390	-		LRK54_RS12500	0.27	-0.1
2,788,513	-		LRK54_RS12500	0.36	+0.3
2,788,513	-		LRK54_RS12500	0.36	+1.0
2,788,636	-		LRK54_RS12500	0.46	+0.8
2,788,804	+		LRK54_RS12500	0.59	+0.1
2,788,804	+		LRK54_RS12500	0.59	+0.6
2,788,804	+		LRK54_RS12500	0.59	+1.2
2,788,804	+		LRK54_RS12500	0.59	+1.1
2,788,804	+		LRK54_RS12500	0.59	+0.7
2,788,804	+		LRK54_RS12500	0.59	+0.1
2,788,804	+		LRK54_RS12500	0.59	+0.5
2,788,804	+		LRK54_RS12500	0.59	+1.8
2,788,804	+		LRK54_RS12500	0.59	-0.5
2,788,804	+		LRK54_RS12500	0.59	+0.9
2,788,804	+		LRK54_RS12500	0.59	+0.0
2,788,804	+		LRK54_RS12500	0.59	-0.6
2,788,804	+		LRK54_RS12500	0.59	+0.3
2,788,804	+		LRK54_RS12500	0.59	+1.3
2,788,804	+		LRK54_RS12500	0.59	+1.8
2,788,804	+		LRK54_RS12500	0.59	-1.9
2,788,804	+		LRK54_RS12500	0.59	+0.3
2,788,805	-		LRK54_RS12500	0.59	-0.7
2,788,805	-		LRK54_RS12500	0.59	-0.6
2,788,805	-		LRK54_RS12500	0.59	+1.7
2,788,805	-		LRK54_RS12500	0.59	-1.6
2,788,805	-		LRK54_RS12500	0.59	-0.9
2,788,805	-		LRK54_RS12500	0.59	+1.1
2,788,805	-		LRK54_RS12500	0.59	+1.4
2,788,805	-		LRK54_RS12500	0.59	-0.6
2,788,805	-		LRK54_RS12500	0.59	+0.3
2,788,805	-		LRK54_RS12500	0.59	-0.8
2,788,805	-		LRK54_RS12500	0.59	-1.2