Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11880

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
2,631,876	+		LRK54_RS11875	0.45	+1.6
2,631,876	+		LRK54_RS11875	0.45	+0.6
2,631,876	+		LRK54_RS11875	0.45	+0.3
2,631,876	+		LRK54_RS11875	0.45	-0.5
2,631,876	+		LRK54_RS11875	0.45	+0.6
2,631,876	+		LRK54_RS11875	0.45	+1.5
2,631,876	+		LRK54_RS11875	0.45	-0.4
2,631,876	+		LRK54_RS11875	0.45	-0.0
2,631,876	+		LRK54_RS11875	0.45	-1.7
2,631,876	+		LRK54_RS11875	0.45	-0.7
2,631,876	+		LRK54_RS11875	0.45	+0.3
2,631,876	+		LRK54_RS11875	0.45	-0.4
2,631,877	-		LRK54_RS11875	0.45	+0.6
2,631,877	-		LRK54_RS11875	0.45	-0.1
2,631,877	-		LRK54_RS11875	0.45	+0.2
2,631,877	-		LRK54_RS11875	0.45	+0.4
2,631,877	-		LRK54_RS11875	0.45	+0.1
2,631,877	-		LRK54_RS11875	0.45	-0.1
2,631,877	-		LRK54_RS11875	0.45	-0.8
2,631,877	-		LRK54_RS11875	0.45	+0.5
2,631,877	-		LRK54_RS11875	0.45	+0.2
2,631,877	-		LRK54_RS11875	0.45	-0.4
2,631,877	-		LRK54_RS11875	0.45	+0.6
2,632,098	+		LRK54_RS11875	0.67	+0.4
2,632,098	+		LRK54_RS11875	0.67	+0.8
2,632,098	+		LRK54_RS11875	0.67	-0.4
2,632,098	+		LRK54_RS11875	0.67	+0.5
2,632,098	+		LRK54_RS11875	0.67	+0.8
2,632,098	+		LRK54_RS11875	0.67	-0.4
2,632,098	+		LRK54_RS11875	0.67	-0.1
2,632,098	+		LRK54_RS11875	0.67	-0.4
2,632,098	+		LRK54_RS11875	0.67	-0.1
2,632,098	+		LRK54_RS11875	0.67	-0.2
2,632,098	+		LRK54_RS11875	0.67	-0.3
2,632,098	+		LRK54_RS11875	0.67	-0.7
2,632,098	+		LRK54_RS11875	0.67	+0.9
2,632,098	+		LRK54_RS11875	0.67	-0.4
2,632,098	+		LRK54_RS11875	0.67	-0.6
2,632,098	+		LRK54_RS11875	0.67	-0.1
2,632,098	+		LRK54_RS11875	0.67	+0.3
2,632,098	+		LRK54_RS11875	0.67	+0.3
2,632,098	+		LRK54_RS11875	0.67	-2.2
2,632,098	+		LRK54_RS11875	0.67	+1.2
2,632,098	+		LRK54_RS11875	0.67	-1.1
2,632,098	+		LRK54_RS11875	0.67	+0.4
2,632,098	+		LRK54_RS11875	0.67	+0.3
2,632,099	-		LRK54_RS11875	0.67	+0.4
2,632,099	-		LRK54_RS11875	0.67	+0.6
2,632,099	-		LRK54_RS11875	0.67	+1.3
2,632,099	-		LRK54_RS11875	0.67	+0.6
2,632,099	-		LRK54_RS11875	0.67	-0.7
2,632,099	-		LRK54_RS11875	0.67	+0.3
2,632,099	-		LRK54_RS11875	0.67	-0.6
2,632,099	-		LRK54_RS11875	0.67	+0.0
2,632,099	-		LRK54_RS11875	0.67	+0.6
2,632,099	-		LRK54_RS11875	0.67	-0.2
2,632,099	-		LRK54_RS11875	0.67	-0.1
2,632,099	-		LRK54_RS11875	0.67	+0.1
2,632,099	-		LRK54_RS11875	0.67	-0.2
2,632,099	-		LRK54_RS11875	0.67	-0.2
2,632,099	-		LRK54_RS11875	0.67	+0.0
2,632,099	-		LRK54_RS11875	0.67	+2.0
2,632,099	-		LRK54_RS11875	0.67	+1.1
2,632,099	-		LRK54_RS11875	0.67	-0.1
2,632,099	-		LRK54_RS11875	0.67	+1.8
2,632,099	-		LRK54_RS11875	0.67	+0.9
2,632,099	-		LRK54_RS11875	0.67	-0.7
2,632,099	-		LRK54_RS11875	0.67	-0.2
2,632,099	-		LRK54_RS11875	0.67	-0.3
2,632,099	-		LRK54_RS11875	0.67	+0.2
2,632,099	-		LRK54_RS11875	0.67	-0.9
2,632,099	-		LRK54_RS11875	0.67	-1.2
2,632,099	-		LRK54_RS11875	0.67	-1.1
2,632,099	-		LRK54_RS11875	0.67	-1.5
2,632,263	+		LRK54_RS11875	0.84	-1.1
2,632,263	+		LRK54_RS11875	0.84	+0.4
2,632,264	-		LRK54_RS11875	0.84	-0.7
2,632,685	+		LRK54_RS11880	0.14	+0.0
2,632,685	+		LRK54_RS11880	0.14	+1.5
2,632,685	+		LRK54_RS11880	0.14	+0.1
2,632,685	+		LRK54_RS11880	0.14	+0.7
2,632,685	+		LRK54_RS11880	0.14	+0.6
2,632,685	+		LRK54_RS11880	0.14	-0.6
2,632,685	+		LRK54_RS11880	0.14	-1.9
2,632,686	-		LRK54_RS11880	0.14	-0.7
2,632,686	-		LRK54_RS11880	0.14	-0.3
2,632,686	-		LRK54_RS11880	0.14	+0.8
2,632,686	-		LRK54_RS11880	0.14	-0.8
2,632,686	-		LRK54_RS11880	0.14	-1.2
2,632,778	+		LRK54_RS11880	0.19	+0.5
2,632,778	+		LRK54_RS11880	0.19	+0.7
2,632,778	+		LRK54_RS11880	0.19	-1.7
2,632,778	+		LRK54_RS11880	0.19	+0.0
2,632,778	+		LRK54_RS11880	0.19	+0.2
2,632,779	-		LRK54_RS11880	0.19	+0.5
2,632,779	-		LRK54_RS11880	0.19	-0.5
2,632,779	-		LRK54_RS11880	0.19	+0.3
2,632,779	-		LRK54_RS11880	0.19	-0.1
2,632,779	-		LRK54_RS11880	0.19	+1.0
2,632,779	-		LRK54_RS11880	0.19	-0.3
2,632,779	-		LRK54_RS11880	0.19	-0.0
2,632,836	-		LRK54_RS11880	0.22	-0.0
2,633,097	+		LRK54_RS11880	0.36	+0.1
2,633,097	+		LRK54_RS11880	0.36	+1.0
2,633,097	+		LRK54_RS11880	0.36	-0.7
2,633,097	+		LRK54_RS11880	0.36	-0.6
2,633,097	+		LRK54_RS11880	0.36	+0.7
2,633,097	+		LRK54_RS11880	0.36	+0.8
2,633,097	+		LRK54_RS11880	0.36	+0.7
2,633,097	+		LRK54_RS11880	0.36	-0.1
2,633,097	+		LRK54_RS11880	0.36	+0.6
2,633,098	-		LRK54_RS11880	0.36	-1.2
2,633,098	-		LRK54_RS11880	0.36	-0.6
2,633,098	-		LRK54_RS11880	0.36	-0.2
2,633,098	-		LRK54_RS11880	0.36	-1.0
2,633,098	-		LRK54_RS11880	0.36	+1.0
2,633,098	-		LRK54_RS11880	0.36	-0.4
2,633,098	-		LRK54_RS11880	0.36	-1.8
2,633,098	-		LRK54_RS11880	0.36	+0.2
2,633,098	-		LRK54_RS11880	0.36	+1.0
2,633,098	-		LRK54_RS11880	0.36	+0.4
2,633,101	+		LRK54_RS11880	0.36	+0.8
2,633,101	+		LRK54_RS11880	0.36	+0.3
2,633,101	+		LRK54_RS11880	0.36	+1.3
2,633,101	+		LRK54_RS11880	0.36	+0.2
2,633,101	+		LRK54_RS11880	0.36	-1.0
2,633,102	-		LRK54_RS11880	0.36	+1.8
2,633,102	-		LRK54_RS11880	0.36	+0.6
2,633,102	-		LRK54_RS11880	0.36	+0.7
2,633,102	-		LRK54_RS11880	0.36	-1.3
2,633,102	-		LRK54_RS11880	0.36	+0.1
2,633,102	-		LRK54_RS11880	0.36	-0.2
2,633,102	-		LRK54_RS11880	0.36	+0.1
2,633,102	-		LRK54_RS11880	0.36	-0.1
2,633,102	-		LRK54_RS11880	0.36	-1.1
2,633,102	-		LRK54_RS11880	0.36	-0.2
2,633,228	+		LRK54_RS11880	0.43	+0.6
2,633,228	+		LRK54_RS11880	0.43	+0.5
2,633,228	+		LRK54_RS11880	0.43	-0.5
2,633,228	+		LRK54_RS11880	0.43	+1.2
2,633,228	+		LRK54_RS11880	0.43	+0.5
2,633,228	+		LRK54_RS11880	0.43	+0.1
2,633,228	+		LRK54_RS11880	0.43	+1.0
2,633,228	+		LRK54_RS11880	0.43	+0.4
2,633,229	-		LRK54_RS11880	0.43	-0.1
2,633,229	-		LRK54_RS11880	0.43	+0.4
2,633,229	-		LRK54_RS11880	0.43	+0.3
2,633,229	-		LRK54_RS11880	0.43	+1.6
2,633,229	-		LRK54_RS11880	0.43	-0.7
2,633,229	-		LRK54_RS11880	0.43	-0.2
2,633,229	-		LRK54_RS11880	0.43	+0.2
2,633,229	-		LRK54_RS11880	0.43	+0.5
2,633,229	-		LRK54_RS11880	0.43	-1.0
2,633,421	+		LRK54_RS11880	0.53	+1.0
2,633,421	+		LRK54_RS11880	0.53	-0.4
2,633,421	+		LRK54_RS11880	0.53	+0.1
2,633,421	+		LRK54_RS11880	0.53	-0.6
2,633,421	+		LRK54_RS11880	0.53	-0.3
2,633,421	+		LRK54_RS11880	0.53	-0.5
2,633,421	+		LRK54_RS11880	0.53	+0.6
2,633,421	+		LRK54_RS11880	0.53	-0.2
2,633,422	-		LRK54_RS11880	0.53	-0.4
2,633,422	-		LRK54_RS11880	0.53	+0.2
2,633,422	-		LRK54_RS11880	0.53	+1.0
2,633,431	-		LRK54_RS11880	0.54	-0.0
2,633,588	+		LRK54_RS11880	0.62	-0.3
2,633,588	+		LRK54_RS11880	0.62	+0.3
2,633,588	+		LRK54_RS11880	0.62	-0.2
2,633,588	+		LRK54_RS11880	0.62	-0.1
2,633,588	+		LRK54_RS11880	0.62	-0.8
2,633,588	+		LRK54_RS11880	0.62	+0.1
2,633,588	+		LRK54_RS11880	0.62	-0.3
2,633,588	+		LRK54_RS11880	0.62	+0.2
2,633,589	-		LRK54_RS11880	0.62	+0.6
2,633,589	-		LRK54_RS11880	0.62	+0.2
2,633,589	-		LRK54_RS11880	0.62	+0.2
2,633,589	-		LRK54_RS11880	0.62	+0.4
2,633,589	-		LRK54_RS11880	0.62	+0.6
2,633,639	+		LRK54_RS11880	0.65	+0.4
2,633,639	+		LRK54_RS11880	0.65	-0.1
2,633,639	+		LRK54_RS11880	0.65	-1.5
2,633,639	+		LRK54_RS11880	0.65	+0.7
2,633,639	+		LRK54_RS11880	0.65	+1.8
2,633,639	+		LRK54_RS11880	0.65	-0.6
2,633,639	+		LRK54_RS11880	0.65	+1.4
2,633,639	+		LRK54_RS11880	0.65	-0.3
2,633,639	+		LRK54_RS11880	0.65	+1.5
2,633,640	-		LRK54_RS11880	0.65	-0.4
2,633,640	-		LRK54_RS11880	0.65	+0.5
2,633,640	-		LRK54_RS11880	0.65	-0.6
2,633,640	-		LRK54_RS11880	0.65	+1.1
2,633,640	-		LRK54_RS11880	0.65	+0.7
2,633,640	-		LRK54_RS11880	0.65	+0.1
2,633,640	-		LRK54_RS11880	0.65	+1.2
2,633,640	-		LRK54_RS11880	0.65	+0.8
2,633,640	-		LRK54_RS11880	0.65	+0.3
2,633,696	+		LRK54_RS11880	0.68	+0.1
2,633,696	+		LRK54_RS11880	0.68	-0.4
2,633,696	+		LRK54_RS11880	0.68	-0.3
2,633,696	+		LRK54_RS11880	0.68	+0.1
2,633,696	+		LRK54_RS11880	0.68	+0.6
2,633,697	-		LRK54_RS11880	0.68	+0.4
2,633,697	-		LRK54_RS11880	0.68	+0.7
2,633,697	-		LRK54_RS11880	0.68	+0.3
2,633,697	-		LRK54_RS11880	0.68	-0.8
2,633,697	-		LRK54_RS11880	0.68	+0.4
2,633,697	-		LRK54_RS11880	0.68	+3.5
2,633,697	-		LRK54_RS11880	0.68	-0.1
2,633,697	-		LRK54_RS11880	0.68	+0.7
2,633,697	-		LRK54_RS11880	0.68	+1.6
2,634,254	+				+0.3
2,634,254	+				+1.3
2,634,254	+				+0.4
2,634,254	+				-0.4
2,634,255	-				+0.2
2,634,255	-				-0.3
2,634,317	+				+0.0
2,634,317	+				-0.2
2,634,317	+				+0.2
2,634,317	+				+0.3
2,634,317	+				+0.2
2,634,317	+				+0.5
2,634,317	+				+0.3
2,634,317	+				+0.3
2,634,317	+				-0.6
2,634,317	+				+0.7
2,634,317	+				+0.8
2,634,317	+				-0.2
2,634,317	+				-0.3
2,634,318	-				+0.0
2,634,318	-				-0.8
2,634,318	-				-1.1
2,634,318	-				+0.5
2,634,318	-				-0.1
2,634,318	-				-0.1
2,634,318	-				+0.1
2,634,318	-				+0.6
2,634,318	-				+0.9
2,634,318	-				-0.6
2,634,318	-				+0.8
2,634,318	-				+0.6
2,634,739	+		LRK54_RS11885	0.24	+0.2
2,634,739	+		LRK54_RS11885	0.24	+0.7
2,634,739	+		LRK54_RS11885	0.24	-0.5
2,634,739	+		LRK54_RS11885	0.24	-1.2
2,634,739	+		LRK54_RS11885	0.24	+1.5
2,634,740	-		LRK54_RS11885	0.24	+0.6
2,634,740	-		LRK54_RS11885	0.24	+0.2
2,634,740	-		LRK54_RS11885	0.24	+0.3
2,634,760	+		LRK54_RS11885	0.26	+0.6
2,634,760	+		LRK54_RS11885	0.26	-0.2
2,634,760	+		LRK54_RS11885	0.26	+0.2
2,634,760	+		LRK54_RS11885	0.26	-2.0
2,634,760	+		LRK54_RS11885	0.26	-0.7
2,634,760	+		LRK54_RS11885	0.26	+0.3
2,634,760	+		LRK54_RS11885	0.26	+1.8
2,634,760	+		LRK54_RS11885	0.26	+0.6
2,634,760	+		LRK54_RS11885	0.26	+0.9
2,634,760	+		LRK54_RS11885	0.26	+0.9
2,634,760	+		LRK54_RS11885	0.26	+0.7
2,634,760	+		LRK54_RS11885	0.26	+0.6
2,634,760	+		LRK54_RS11885	0.26	-0.1
2,634,760	+		LRK54_RS11885	0.26	+2.5
2,634,760	+		LRK54_RS11885	0.26	-1.1
2,634,760	+		LRK54_RS11885	0.26	-0.2
2,634,760	+		LRK54_RS11885	0.26	+0.1
2,634,760	+		LRK54_RS11885	0.26	+0.7
2,634,760	+		LRK54_RS11885	0.26	-0.7
2,634,761	-		LRK54_RS11885	0.26	+1.0
2,634,761	-		LRK54_RS11885	0.26	+0.2
2,634,761	-		LRK54_RS11885	0.26	-0.1
2,634,761	-		LRK54_RS11885	0.26	+0.3
2,634,761	-		LRK54_RS11885	0.26	-0.3
2,634,761	-		LRK54_RS11885	0.26	+0.5
2,634,761	-		LRK54_RS11885	0.26	-0.4
2,634,761	-		LRK54_RS11885	0.26	+0.3
2,634,761	-		LRK54_RS11885	0.26	+0.7
2,634,761	-		LRK54_RS11885	0.26	-0.5
2,634,761	-		LRK54_RS11885	0.26	+0.8
2,634,761	-		LRK54_RS11885	0.26	-0.5
2,634,761	-		LRK54_RS11885	0.26	-0.1
2,634,761	-		LRK54_RS11885	0.26	+1.1
2,634,761	-		LRK54_RS11885	0.26	+0.2
2,634,761	-		LRK54_RS11885	0.26	+0.6
2,634,761	-		LRK54_RS11885	0.26	+0.6
2,634,761	-		LRK54_RS11885	0.26	-1.1
2,634,761	-		LRK54_RS11885	0.26	-0.6
2,634,775	+		LRK54_RS11885	0.27	+1.7
2,634,775	+		LRK54_RS11885	0.27	+0.1
2,634,775	+		LRK54_RS11885	0.27	+0.3
2,634,775	+		LRK54_RS11885	0.27	+0.0
2,634,775	+		LRK54_RS11885	0.27	+1.2
2,634,775	+		LRK54_RS11885	0.27	-0.5
2,634,775	+		LRK54_RS11885	0.27	+0.7
2,634,776	-		LRK54_RS11885	0.27	+0.5
2,634,776	-		LRK54_RS11885	0.27	-0.1
2,634,776	-		LRK54_RS11885	0.27	-1.3
2,634,776	-		LRK54_RS11885	0.27	-0.1
2,634,776	-		LRK54_RS11885	0.27	+0.6
2,634,776	-		LRK54_RS11885	0.27	+1.8
2,634,776	-		LRK54_RS11885	0.27	-0.8
2,634,776	-		LRK54_RS11885	0.27	+0.0
2,634,776	-		LRK54_RS11885	0.27	+0.1
2,634,776	-		LRK54_RS11885	0.27	+0.9
2,634,776	-		LRK54_RS11885	0.27	-0.6
2,634,776	-		LRK54_RS11885	0.27	+0.0
2,634,778	+		LRK54_RS11885	0.27	-1.0
2,634,778	+		LRK54_RS11885	0.27	+0.5
2,634,778	+		LRK54_RS11885	0.27	+1.8
2,634,778	+		LRK54_RS11885	0.27	+0.2
2,634,778	+		LRK54_RS11885	0.27	+0.3
2,634,778	+		LRK54_RS11885	0.27	+0.9
2,634,779	-		LRK54_RS11885	0.27	+0.0
2,634,779	-		LRK54_RS11885	0.27	+0.3
2,634,779	-		LRK54_RS11885	0.27	+0.3
2,634,779	-		LRK54_RS11885	0.27	+0.5
2,634,779	-		LRK54_RS11885	0.27	-1.0
2,634,779	-		LRK54_RS11885	0.27	+0.8
2,634,779	-		LRK54_RS11885	0.27	+0.3
2,634,779	-		LRK54_RS11885	0.27	-0.7
2,634,779	-		LRK54_RS11885	0.27	-0.2
2,634,779	-		LRK54_RS11885	0.27	+0.2
2,634,862	+		LRK54_RS11885	0.32	+0.1
2,634,862	+		LRK54_RS11885	0.32	+0.2
2,634,862	+		LRK54_RS11885	0.32	+1.0
2,634,862	+		LRK54_RS11885	0.32	+0.2
2,634,862	+		LRK54_RS11885	0.32	-0.8
2,634,863	-		LRK54_RS11885	0.32	-2.0
2,634,863	-		LRK54_RS11885	0.32	-0.5
2,634,863	-		LRK54_RS11885	0.32	+0.6
2,634,863	-		LRK54_RS11885	0.32	-0.1
2,634,863	-		LRK54_RS11885	0.32	+1.1
2,634,863	-		LRK54_RS11885	0.32	-1.7
2,634,863	-		LRK54_RS11885	0.32	+0.2
2,634,863	-		LRK54_RS11885	0.32	+0.1
2,634,885	+		LRK54_RS11885	0.33	-0.8
2,634,885	+		LRK54_RS11885	0.33	+0.8
2,634,886	-		LRK54_RS11885	0.33	-0.4
2,634,886	-		LRK54_RS11885	0.33	+0.5
2,634,886	-		LRK54_RS11885	0.33	-0.3
2,634,889	+		LRK54_RS11885	0.33	-0.0
2,634,889	+		LRK54_RS11885	0.33	-0.0
2,634,889	+		LRK54_RS11885	0.33	-0.4
2,634,889	+		LRK54_RS11885	0.33	+0.1
2,634,889	+		LRK54_RS11885	0.33	-1.0
2,634,889	+		LRK54_RS11885	0.33	-0.8
2,634,889	+		LRK54_RS11885	0.33	+1.6
2,634,890	-		LRK54_RS11885	0.34	-0.5
2,634,890	-		LRK54_RS11885	0.34	+1.4
2,634,890	-		LRK54_RS11885	0.34	+0.2
2,634,890	-		LRK54_RS11885	0.34	+0.4
2,634,890	-		LRK54_RS11885	0.34	-2.4
2,634,890	-		LRK54_RS11885	0.34	+0.9
2,634,890	-		LRK54_RS11885	0.34	+0.9
2,634,890	-		LRK54_RS11885	0.34	-1.4
2,634,890	-		LRK54_RS11885	0.34	+0.6
2,635,210	+		LRK54_RS11885	0.53	+0.2
2,635,210	+		LRK54_RS11885	0.53	+0.3
2,635,210	+		LRK54_RS11885	0.53	+0.2
2,635,210	+		LRK54_RS11885	0.53	-0.3
2,635,210	+		LRK54_RS11885	0.53	+0.4
2,635,210	+		LRK54_RS11885	0.53	+1.0
2,635,210	+		LRK54_RS11885	0.53	+0.5
2,635,211	-		LRK54_RS11885	0.53	+0.3
2,635,211	-		LRK54_RS11885	0.53	+1.0
2,635,211	-		LRK54_RS11885	0.53	-0.5
2,635,211	-		LRK54_RS11885	0.53	+0.2
2,635,262	-		LRK54_RS11885	0.56	-1.7
2,635,262	-		LRK54_RS11885	0.56	+0.9
2,635,262	-		LRK54_RS11885	0.56	+1.0
2,635,262	-		LRK54_RS11885	0.56	+1.5
2,635,262	-		LRK54_RS11885	0.56	+0.1