Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11690

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
2,592,620	+				-0.6
2,592,620	+				-0.3
2,592,620	+				-0.8
2,592,620	+				-1.8
2,592,621	-				-0.2
2,592,621	-				+0.1
2,592,621	-				-0.4
2,592,621	-				+0.1
2,592,621	-				+0.2
2,592,621	-				-1.1
2,592,621	-				-0.2
2,592,621	-				-0.2
2,592,621	-				-0.6
2,592,621	-				-0.6
2,592,729	+				-1.1
2,592,729	+				-0.0
2,592,729	+				-1.7
2,592,729	+				-1.6
2,592,729	+				-0.6
2,592,729	+				-0.5
2,592,729	+				+0.9
2,592,729	+				-0.4
2,592,729	+				-0.8
2,592,729	+				-0.4
2,592,729	+				+0.2
2,592,729	+				-0.6
2,592,729	+				+0.6
2,592,729	+				-0.7
2,592,729	+				+0.1
2,592,729	+				-1.7
2,592,729	+				-1.3
2,592,729	+				-1.7
2,592,729	+				-2.0
2,592,729	+				+0.0
2,592,729	+				+0.8
2,592,729	+				+2.2
2,592,729	+				-1.8
2,592,729	+				-0.3
2,592,729	+				-0.1
2,592,729	+				-1.0
2,592,729	+				-0.7
2,592,729	+				-1.3
2,592,729	+				-1.4
2,592,729	+				-0.6
2,592,730	-				+0.2
2,592,730	-				+0.0
2,592,730	-				-0.9
2,592,730	-				-2.0
2,592,730	-				-1.3
2,592,730	-				-1.0
2,592,730	-				-2.0
2,592,730	-				-0.0
2,592,730	-				-0.4
2,592,730	-				+0.2
2,592,730	-				+1.1
2,592,730	-				-0.7
2,592,730	-				-1.0
2,592,730	-				-1.5
2,592,730	-				-1.0
2,592,730	-				-2.4
2,592,730	-				-0.0
2,592,730	-				+0.0
2,592,730	-				+0.1
2,592,730	-				-1.8
2,592,730	-				-0.7
2,592,730	-				-1.4
2,592,730	-				-0.7
2,592,730	-				-1.4
2,592,730	-				-0.5
2,592,730	-				+0.1
2,592,730	-				-0.4
2,592,730	-				+1.4
2,592,730	-				-2.7
2,592,730	-				+0.8
2,592,730	-				-1.7
2,592,730	-				-0.5
2,592,730	-				+0.1
2,592,730	-				-0.1
2,592,730	-				+0.9
2,592,730	-				-0.9
2,592,730	-				+0.1
2,592,730	-				-0.1
2,592,730	-				-0.1
2,592,798	+				-1.7
2,592,799	+				-0.0
2,592,799	+				-0.8
2,592,800	-				-1.0
2,592,800	-				-0.1
2,592,800	-				+0.3
2,592,800	-				+0.2
2,592,803	+				+0.3
2,592,803	+				-1.0
2,592,803	+				-0.3
2,592,804	-				-0.6
2,592,804	-				-1.7
2,592,804	-				+1.2
2,592,804	-				+0.6
2,592,804	-				+0.2
2,592,804	-				-0.4
2,592,804	-				-0.8
2,592,804	-				+0.2
2,592,804	-				-2.3
2,592,804	-				+0.2
2,592,804	-				-0.6
2,592,804	-				+0.3
2,592,804	-				-3.0
2,592,820	+				-0.8
2,592,820	+				-1.7
2,592,820	+				-0.4
2,592,820	+				-0.7
2,592,820	+				-0.8
2,592,820	+				-0.6
2,592,820	+				+0.6
2,592,820	+				+1.6
2,592,820	+				-1.0
2,592,820	+				-0.6
2,592,820	+				-0.1
2,592,820	+				-1.1
2,592,820	+				-1.1
2,592,820	+				-0.4
2,592,820	+				-1.2
2,592,820	+				+2.2
2,592,820	+				+0.9
2,592,820	+				-0.8
2,592,821	-				-0.0
2,592,821	-				-0.9
2,592,821	-				-0.8
2,592,821	-				-0.1
2,592,821	-				-0.7
2,592,821	-				+0.3
2,592,821	-				-0.1
2,592,821	-				-0.4
2,592,821	-				+1.0
2,592,821	-				-0.3
2,592,821	-				+0.1
2,592,821	-				-1.3
2,592,821	-				+0.4
2,592,821	-				-0.0
2,592,821	-				+0.3
2,592,821	-				-0.4
2,592,821	-				-0.1
2,592,821	-				+0.3
2,592,821	-				-1.6
2,592,821	-				-1.5
2,592,821	-				+0.4
2,592,821	-				+0.6
2,592,821	-				-0.4
2,592,821	-				-2.5
2,592,865	+				-0.2
2,592,865	+				+0.0
2,592,865	+				+3.8
2,592,865	+				+0.2
2,592,865	+				-0.2
2,592,866	-				+0.3
2,592,866	-				+0.6
2,592,866	-				-0.2
2,592,930	+				-0.2
2,592,930	+				+0.4
2,592,930	+				-0.6
2,592,931	-				+0.2
2,593,012	+		LRK54_RS11680	0.27	-0.1
2,593,014	+		LRK54_RS11680	0.28	-2.0
2,593,014	+		LRK54_RS11680	0.28	+0.4
2,593,014	+		LRK54_RS11680	0.28	-1.0
2,593,014	+		LRK54_RS11680	0.28	-1.3
2,593,014	+		LRK54_RS11680	0.28	-0.7
2,593,014	+		LRK54_RS11680	0.28	-0.1
2,593,014	+		LRK54_RS11680	0.28	-0.5
2,593,014	+		LRK54_RS11680	0.28	+1.2
2,593,014	+		LRK54_RS11680	0.28	+0.0
2,593,015	-		LRK54_RS11680	0.28	-0.1
2,593,015	-		LRK54_RS11680	0.28	-0.0
2,593,015	-		LRK54_RS11680	0.28	-0.3
2,593,244	+				+1.2
2,593,244	+				-0.2
2,593,244	+				+1.3
2,593,244	+				-0.0
2,593,244	+				-1.4
2,593,244	+				-1.3
2,593,244	+				-0.1
2,593,244	+				+1.4
2,593,244	+				+0.2
2,593,244	+				-1.4
2,593,244	+				-0.4
2,593,244	+				-0.2
2,593,244	+				+0.5
2,593,244	+				-0.2
2,593,244	+				+0.4
2,593,244	+				-0.7
2,593,244	+				+0.3
2,593,245	-				-0.5
2,593,245	-				-0.2
2,593,245	-				-0.1
2,593,245	-				+1.1
2,593,245	-				-0.2
2,593,245	-				+3.8
2,593,245	-				+0.5
2,593,245	-				-0.6
2,593,245	-				+0.3
2,593,245	-				+0.3
2,593,245	-				-0.3
2,593,245	-				+0.4
2,593,245	-				+0.8
2,593,245	-				+0.6
2,593,245	-				-0.2
2,593,245	-				+0.6
2,593,495	+				-0.8
2,593,496	-				-0.8
2,593,496	-				+0.8
2,593,496	-				+0.4
2,593,496	-				-0.3
2,593,496	-				+0.9
2,593,496	-				-0.3
2,593,496	-				-0.7
2,593,496	-				-0.0
2,593,496	-				-0.7
2,593,496	-				+0.8
2,593,496	-				-0.8
2,593,496	-				+0.8
2,593,496	-				-1.5
2,593,496	-				-1.6
2,593,496	-				-1.4
2,593,496	-				+1.1
2,593,496	-				+0.4
2,593,496	-				+0.0
2,593,496	-				-1.8
2,593,497	+				-0.6
2,593,497	+				-1.3
2,593,497	+				-0.6
2,593,497	+				+0.5
2,593,497	+				+0.2
2,593,497	+				-1.7
2,593,498	-				+0.4
2,593,498	-				-0.0
2,593,498	-				+0.6
2,593,498	-				-0.6
2,593,498	-				-1.1
2,593,498	-				-2.2
2,593,562	+				-0.1
2,593,562	+				-1.7
2,593,562	+				+2.2
2,593,563	-				-1.0
2,593,563	-				+0.4
2,593,563	-				-0.9
2,593,563	-				+2.1
2,593,563	-				-0.6
2,593,563	-				+0.1
2,593,563	-				-1.9
2,593,563	-				+1.2
2,593,577	+				-1.1
2,593,577	+				-1.4
2,593,577	+				-0.1
2,593,577	+				-1.4
2,593,577	+				-0.0
2,593,577	+				-0.8
2,593,578	-				+0.3
2,593,578	-				+0.6
2,593,578	-				-1.0
2,593,578	-				+0.1
2,593,578	-				+0.3
2,593,578	-				-0.4
2,593,578	-				+0.6
2,593,698	+		LRK54_RS11690	0.18	-0.4
2,593,698	+		LRK54_RS11690	0.18	+0.4
2,593,698	+		LRK54_RS11690	0.18	+0.3
2,593,698	+		LRK54_RS11690	0.18	+0.3
2,593,698	+		LRK54_RS11690	0.18	+1.6
2,593,699	-		LRK54_RS11690	0.18	-0.5
2,594,336	+		LRK54_RS11695	0.13	+0.3
2,594,336	+		LRK54_RS11695	0.13	+1.3
2,594,336	+		LRK54_RS11695	0.13	+0.4
2,594,337	-		LRK54_RS11695	0.13	-0.8
2,594,337	-		LRK54_RS11695	0.13	+0.5
2,594,337	-		LRK54_RS11695	0.13	-0.3
2,594,337	-		LRK54_RS11695	0.13	-2.2
2,594,337	-		LRK54_RS11695	0.13	+0.3
2,594,564	+		LRK54_RS11695	0.30	+0.3
2,594,564	+		LRK54_RS11695	0.30	-1.8
2,594,564	+		LRK54_RS11695	0.30	+2.2
2,594,564	+		LRK54_RS11695	0.30	+0.6
2,594,564	+		LRK54_RS11695	0.30	+0.8
2,594,564	+		LRK54_RS11695	0.30	+0.3
2,594,564	+		LRK54_RS11695	0.30	-1.8
2,594,564	+		LRK54_RS11695	0.30	+0.3
2,594,565	-		LRK54_RS11695	0.30	-0.3
2,594,565	-		LRK54_RS11695	0.30	+0.1
2,594,565	-		LRK54_RS11695	0.30	-1.5
2,594,565	-		LRK54_RS11695	0.30	-0.4
2,594,565	-		LRK54_RS11695	0.30	-0.3
2,594,565	-		LRK54_RS11695	0.30	+0.4
2,594,565	-		LRK54_RS11695	0.30	+1.0
2,594,565	-		LRK54_RS11695	0.30	-0.1
2,594,565	-		LRK54_RS11695	0.30	-0.2
2,594,565	-		LRK54_RS11695	0.30	+0.2
2,594,565	-		LRK54_RS11695	0.30	-1.1
2,594,565	-		LRK54_RS11695	0.30	+0.9
2,594,565	-		LRK54_RS11695	0.30	-0.6
2,594,565	-		LRK54_RS11695	0.30	-1.6
2,594,702	+		LRK54_RS11695	0.41	-0.4
2,594,702	+		LRK54_RS11695	0.41	+0.4
2,594,702	+		LRK54_RS11695	0.41	+1.0
2,594,702	+		LRK54_RS11695	0.41	-0.7
2,594,702	+		LRK54_RS11695	0.41	+1.8
2,594,702	+		LRK54_RS11695	0.41	-1.0
2,594,702	+		LRK54_RS11695	0.41	-0.5
2,594,702	+		LRK54_RS11695	0.41	+0.6
2,594,702	+		LRK54_RS11695	0.41	-1.2
2,594,702	+		LRK54_RS11695	0.41	+1.8
2,594,703	-		LRK54_RS11695	0.41	+0.5
2,594,703	-		LRK54_RS11695	0.41	-0.2
2,594,703	-		LRK54_RS11695	0.41	+0.5
2,594,703	-		LRK54_RS11695	0.41	-0.9
2,594,703	-		LRK54_RS11695	0.41	+0.5
2,594,703	-		LRK54_RS11695	0.41	+1.6
2,594,703	-		LRK54_RS11695	0.41	-0.5
2,594,703	-		LRK54_RS11695	0.41	+0.7
2,594,703	-		LRK54_RS11695	0.41	+0.2
2,594,703	-		LRK54_RS11695	0.41	-0.1
2,594,703	-		LRK54_RS11695	0.41	+0.2
2,594,703	-		LRK54_RS11695	0.41	-0.1
2,594,703	-		LRK54_RS11695	0.41	-0.0
2,594,703	-		LRK54_RS11695	0.41	-0.0
2,594,703	-		LRK54_RS11695	0.41	-1.4
2,594,703	-		LRK54_RS11695	0.41	+1.2
2,594,703	-		LRK54_RS11695	0.41	-1.1
2,594,703	-		LRK54_RS11695	0.41	-1.4
2,594,703	-		LRK54_RS11695	0.41	-0.3
2,594,804	+		LRK54_RS11695	0.48	-0.7
2,594,804	+		LRK54_RS11695	0.48	+0.6
2,594,804	+		LRK54_RS11695	0.48	-1.0
2,594,805	-		LRK54_RS11695	0.48	-0.1
2,594,805	-		LRK54_RS11695	0.48	+0.4
2,594,805	-		LRK54_RS11695	0.48	+0.2
2,594,805	-		LRK54_RS11695	0.48	-2.0
2,594,805	-		LRK54_RS11695	0.48	+0.1
2,594,906	+		LRK54_RS11695	0.56	+0.3
2,594,906	+		LRK54_RS11695	0.56	+1.5
2,594,906	+		LRK54_RS11695	0.56	-0.0
2,594,906	+		LRK54_RS11695	0.56	-0.2
2,594,907	-		LRK54_RS11695	0.56	+0.5
2,594,907	-		LRK54_RS11695	0.56	-0.1
2,594,907	-		LRK54_RS11695	0.56	-0.1
2,594,907	-		LRK54_RS11695	0.56	-0.9
2,594,978	+		LRK54_RS11695	0.61	+0.8
2,594,978	+		LRK54_RS11695	0.61	-0.9
2,594,978	+		LRK54_RS11695	0.61	-1.9
2,594,978	+		LRK54_RS11695	0.61	+0.2
2,594,978	+		LRK54_RS11695	0.61	-1.1
2,594,978	+		LRK54_RS11695	0.61	+1.5
2,594,978	+		LRK54_RS11695	0.61	+1.2
2,594,979	-		LRK54_RS11695	0.61	+1.8
2,594,979	-		LRK54_RS11695	0.61	+0.9
2,594,979	-		LRK54_RS11695	0.61	-0.6
2,594,979	-		LRK54_RS11695	0.61	+3.5
2,594,979	-		LRK54_RS11695	0.61	+1.9
2,594,979	-		LRK54_RS11695	0.61	-0.2
2,594,979	-		LRK54_RS11695	0.61	-0.4
2,594,979	-		LRK54_RS11695	0.61	-2.6
2,594,979	-		LRK54_RS11695	0.61	+1.3
2,594,979	-		LRK54_RS11695	0.61	-0.6
2,594,979	-		LRK54_RS11695	0.61	+0.1
2,594,979	-		LRK54_RS11695	0.61	+1.4
2,594,979	-		LRK54_RS11695	0.61	+0.6
2,595,021	-		LRK54_RS11695	0.65	+0.3
2,595,021	-		LRK54_RS11695	0.65	+0.0
2,595,021	-		LRK54_RS11695	0.65	-1.5
2,595,044	+		LRK54_RS11695	0.66	-1.0
2,595,044	+		LRK54_RS11695	0.66	+0.1
2,595,044	+		LRK54_RS11695	0.66	+0.1
2,595,044	+		LRK54_RS11695	0.66	+0.3
2,595,044	+		LRK54_RS11695	0.66	-0.6
2,595,044	+		LRK54_RS11695	0.66	-0.1
2,595,044	+		LRK54_RS11695	0.66	-1.0
2,595,044	+		LRK54_RS11695	0.66	+0.2
2,595,044	+		LRK54_RS11695	0.66	-0.3
2,595,044	+		LRK54_RS11695	0.66	+1.0
2,595,044	+		LRK54_RS11695	0.66	-0.1
2,595,044	+		LRK54_RS11695	0.66	+0.0
2,595,044	+		LRK54_RS11695	0.66	-0.5
2,595,044	+		LRK54_RS11695	0.66	+0.2
2,595,044	+		LRK54_RS11695	0.66	+0.0
2,595,044	+		LRK54_RS11695	0.66	-0.0
2,595,044	+		LRK54_RS11695	0.66	-0.5
2,595,044	+		LRK54_RS11695	0.66	+1.0
2,595,044	+		LRK54_RS11695	0.66	+0.3
2,595,044	+		LRK54_RS11695	0.66	+0.1
2,595,044	+		LRK54_RS11695	0.66	-0.2
2,595,044	+		LRK54_RS11695	0.66	-0.5
2,595,044	+		LRK54_RS11695	0.66	+0.3
2,595,044	+		LRK54_RS11695	0.66	-0.8
2,595,044	+		LRK54_RS11695	0.66	+0.4
2,595,044	+		LRK54_RS11695	0.66	-1.8
2,595,045	-		LRK54_RS11695	0.66	-0.8
2,595,045	-		LRK54_RS11695	0.66	-0.5
2,595,045	-		LRK54_RS11695	0.66	+0.2
2,595,045	-		LRK54_RS11695	0.66	-1.3
2,595,045	-		LRK54_RS11695	0.66	-0.8
2,595,045	-		LRK54_RS11695	0.66	-0.9
2,595,045	-		LRK54_RS11695	0.66	-1.0
2,595,045	-		LRK54_RS11695	0.66	+0.0
2,595,045	-		LRK54_RS11695	0.66	+0.5
2,595,045	-		LRK54_RS11695	0.66	-0.0
2,595,045	-		LRK54_RS11695	0.66	-2.4
2,595,045	-		LRK54_RS11695	0.66	-0.1
2,595,045	-		LRK54_RS11695	0.66	+1.0
2,595,045	-		LRK54_RS11695	0.66	+0.0
2,595,045	-		LRK54_RS11695	0.66	+0.1
2,595,045	-		LRK54_RS11695	0.66	+0.0
2,595,045	-		LRK54_RS11695	0.66	-0.8
2,595,045	-		LRK54_RS11695	0.66	-1.7
2,595,045	-		LRK54_RS11695	0.66	+1.8
2,595,045	-		LRK54_RS11695	0.66	-0.8
2,595,045	-		LRK54_RS11695	0.66	+0.0
2,595,045	-		LRK54_RS11695	0.66	+0.4
2,595,045	-		LRK54_RS11695	0.66	-1.1
2,595,045	-		LRK54_RS11695	0.66	-0.1