Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10305

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
2,268,896	+		LRK54_RS10300	0.42	-0.1
2,268,896	+		LRK54_RS10300	0.42	+0.1
2,268,896	+		LRK54_RS10300	0.42	+0.3
2,268,896	+		LRK54_RS10300	0.42	+0.4
2,268,897	-		LRK54_RS10300	0.42	-1.0
2,268,897	-		LRK54_RS10300	0.42	-0.5
2,268,897	-		LRK54_RS10300	0.42	-0.1
2,268,897	-		LRK54_RS10300	0.42	-0.9
2,268,959	+		LRK54_RS10300	0.46	-1.5
2,268,959	+		LRK54_RS10300	0.46	-0.4
2,268,959	+		LRK54_RS10300	0.46	+0.8
2,268,959	+		LRK54_RS10300	0.46	-0.1
2,268,959	+		LRK54_RS10300	0.46	+0.0
2,268,959	+		LRK54_RS10300	0.46	-1.3
2,268,959	+		LRK54_RS10300	0.46	-0.7
2,268,959	+		LRK54_RS10300	0.46	-1.7
2,268,959	+		LRK54_RS10300	0.46	-0.5
2,268,959	+		LRK54_RS10300	0.46	-0.5
2,268,959	+		LRK54_RS10300	0.46	+0.7
2,268,959	+		LRK54_RS10300	0.46	+0.3
2,268,959	+		LRK54_RS10300	0.46	-0.3
2,268,960	-		LRK54_RS10300	0.46	+0.0
2,268,960	-		LRK54_RS10300	0.46	-1.8
2,268,960	-		LRK54_RS10300	0.46	+0.7
2,268,960	-		LRK54_RS10300	0.46	+0.4
2,268,960	-		LRK54_RS10300	0.46	+0.5
2,268,960	-		LRK54_RS10300	0.46	+0.7
2,268,960	-		LRK54_RS10300	0.46	-1.0
2,268,960	-		LRK54_RS10300	0.46	+0.5
2,268,960	-		LRK54_RS10300	0.46	+0.9
2,268,960	-		LRK54_RS10300	0.46	-0.7
2,268,960	-		LRK54_RS10300	0.46	+0.7
2,269,391	+		LRK54_RS10300	0.74	+0.9
2,269,391	+		LRK54_RS10300	0.74	-2.2
2,269,392	-		LRK54_RS10300	0.74	-0.2
2,269,392	-		LRK54_RS10300	0.74	-0.0
2,269,604	+		LRK54_RS10300	0.87	-0.1
2,269,604	+		LRK54_RS10300	0.87	-0.8
2,269,605	-		LRK54_RS10300	0.87	-0.3
2,269,605	-		LRK54_RS10300	0.87	+2.2
2,269,605	-		LRK54_RS10300	0.87	-0.3
2,269,605	-		LRK54_RS10300	0.87	+0.7
2,269,727	+				+0.0
2,269,728	-				-0.7
2,269,728	-				-1.5
2,269,728	-				+0.5
2,269,728	-				+0.1
2,269,963	+		LRK54_RS10305	0.67	-1.2
2,269,963	+		LRK54_RS10305	0.67	-0.8
2,269,964	-		LRK54_RS10305	0.67	+0.2
2,269,964	-		LRK54_RS10305	0.67	-0.3
2,269,964	-		LRK54_RS10305	0.67	-0.7
2,270,020	-		LRK54_RS10305	0.90	-0.5
2,270,141	-				-0.8
2,270,285	+				-0.2
2,270,285	+				+0.2
2,270,286	-				-0.7
2,270,286	-				-0.1
2,270,286	-				+0.8
2,270,286	-				-0.6
2,270,312	+				+0.3
2,270,312	+				+1.5
2,270,312	+				-0.8
2,270,312	+				-1.0
2,270,313	-				+1.2
2,270,313	-				+0.5
2,270,314	+				+0.7
2,270,314	+				+1.0
2,270,314	+				+0.1
2,270,314	+				+0.1
2,270,314	+				-1.0
2,270,314	+				+0.2
2,270,314	+				-1.0
2,270,314	+				-0.5
2,270,314	+				-1.5
2,270,315	-				+2.2
2,270,315	-				-0.6
2,270,315	-				-0.9
2,270,315	-				-0.7
2,270,315	-				+0.9
2,270,315	-				-1.3
2,270,315	-				+0.5
2,270,315	-				-0.3
2,270,315	-				+0.5
2,270,315	-				+2.0
2,270,315	-				-0.0
2,270,315	-				+0.4
2,270,315	-				-2.2
2,270,507	+		LRK54_RS10310	0.17	+1.0
2,270,507	+		LRK54_RS10310	0.17	+0.0
2,270,507	+		LRK54_RS10310	0.17	-0.1
2,270,507	+		LRK54_RS10310	0.17	+0.0
2,270,507	+		LRK54_RS10310	0.17	-0.1
2,270,507	+		LRK54_RS10310	0.17	+3.2
2,270,507	+		LRK54_RS10310	0.17	-0.4
2,270,507	+		LRK54_RS10310	0.17	-1.8
2,270,507	+		LRK54_RS10310	0.17	-1.5
2,270,507	+		LRK54_RS10310	0.17	+1.1
2,270,508	-		LRK54_RS10310	0.17	+0.2
2,270,508	-		LRK54_RS10310	0.17	+0.2
2,270,508	-		LRK54_RS10310	0.17	+0.6
2,270,508	-		LRK54_RS10310	0.17	+0.9
2,270,508	-		LRK54_RS10310	0.17	-0.2
2,270,579	+		LRK54_RS10310	0.21	+0.1
2,270,579	+		LRK54_RS10310	0.21	+0.9
2,270,579	+		LRK54_RS10310	0.21	+1.1
2,270,579	+		LRK54_RS10310	0.21	-0.2
2,270,579	+		LRK54_RS10310	0.21	-1.0
2,270,580	-		LRK54_RS10310	0.21	-0.3
2,270,580	-		LRK54_RS10310	0.21	+0.2
2,270,580	-		LRK54_RS10310	0.21	+0.1
2,270,756	+		LRK54_RS10310	0.31	-2.2
2,270,756	+		LRK54_RS10310	0.31	-0.5
2,270,756	+		LRK54_RS10310	0.31	+1.2
2,270,757	-		LRK54_RS10310	0.31	+0.7
2,270,757	-		LRK54_RS10310	0.31	-0.6
2,270,757	-		LRK54_RS10310	0.31	-0.9
2,270,757	-		LRK54_RS10310	0.31	-1.5
2,270,757	-		LRK54_RS10310	0.31	+0.2
2,270,757	-		LRK54_RS10310	0.31	-0.4
2,270,757	-		LRK54_RS10310	0.31	-2.5
2,270,847	-		LRK54_RS10310	0.36	+1.2
2,270,876	+		LRK54_RS10310	0.38	+2.0
2,270,876	+		LRK54_RS10310	0.38	+0.0
2,270,876	+		LRK54_RS10310	0.38	-0.8
2,270,877	-		LRK54_RS10310	0.38	+0.2
2,270,877	-		LRK54_RS10310	0.38	-0.6
2,270,877	-		LRK54_RS10310	0.38	-0.9
2,270,960	+		LRK54_RS10310	0.42	+1.2
2,270,960	+		LRK54_RS10310	0.42	-0.5
2,270,961	-		LRK54_RS10310	0.42	-0.7