Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10280

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
2,263,057	+		LRK54_RS10270	0.39	-1.2
2,263,058	-		LRK54_RS10270	0.39	-0.2
2,263,058	-		LRK54_RS10270	0.39	+0.7
2,263,189	+		LRK54_RS10270	0.57	-0.2
2,263,189	+		LRK54_RS10270	0.57	-0.2
2,263,189	+		LRK54_RS10270	0.57	-0.8
2,263,189	+		LRK54_RS10270	0.57	-1.7
2,263,190	-		LRK54_RS10270	0.57	-0.6
2,263,520	+				+0.7
2,263,630	+		LRK54_RS10275	0.24	+0.3
2,263,630	+		LRK54_RS10275	0.24	-0.7
2,263,630	+		LRK54_RS10275	0.24	-0.1
2,263,630	+		LRK54_RS10275	0.24	-0.1
2,263,630	+		LRK54_RS10275	0.24	-0.4
2,263,631	-		LRK54_RS10275	0.24	-0.6
2,263,631	-		LRK54_RS10275	0.24	+0.1
2,263,631	-		LRK54_RS10275	0.24	+0.1
2,263,631	-		LRK54_RS10275	0.24	-1.1
2,263,693	+		LRK54_RS10275	0.43	+0.1
2,263,736	-		LRK54_RS10275	0.56	+0.3
2,263,736	-		LRK54_RS10275	0.56	-0.4
2,263,774	+		LRK54_RS10275	0.67	-0.0
2,263,774	+		LRK54_RS10275	0.67	-1.6
2,263,774	+		LRK54_RS10275	0.67	-0.2
2,263,774	+		LRK54_RS10275	0.67	-0.9
2,263,775	-		LRK54_RS10275	0.67	-1.7
2,263,775	-		LRK54_RS10275	0.67	+0.9
2,263,775	-		LRK54_RS10275	0.67	+0.1
2,263,775	-		LRK54_RS10275	0.67	+1.5
2,263,778	-		LRK54_RS10275	0.68	-1.2
2,263,825	+		LRK54_RS10275	0.82	+0.2
2,263,825	+		LRK54_RS10275	0.82	+0.1
2,263,825	+		LRK54_RS10275	0.82	-1.2
2,263,825	+		LRK54_RS10275	0.82	+0.1
2,263,826	-		LRK54_RS10275	0.82	+0.1
2,263,826	-		LRK54_RS10275	0.82	+0.1
2,263,826	-		LRK54_RS10275	0.82	-0.5
2,263,826	-		LRK54_RS10275	0.82	+0.9
2,263,863	+				-0.9
2,263,863	+				+0.1
2,263,864	-				+0.6
2,263,864	-				+0.2
2,263,957	-		LRK54_RS10280	0.16	-0.3
2,264,008	+		LRK54_RS10280	0.26	+0.8
2,264,008	+		LRK54_RS10280	0.26	+0.3
2,264,009	-		LRK54_RS10280	0.26	+0.2
2,264,319	+		LRK54_RS10280	0.85	-0.1
2,264,320	-		LRK54_RS10280	0.85	-1.7
2,264,320	-		LRK54_RS10280	0.85	+2.5
2,264,320	-		LRK54_RS10280	0.85	+0.1
2,264,320	-		LRK54_RS10280	0.85	-1.3
2,264,320	-		LRK54_RS10280	0.85	+0.3
2,264,320	-		LRK54_RS10280	0.85	-0.0
2,264,347	+				-1.0
2,264,348	-				-0.6
2,264,367	+				+0.9
2,264,367	+				-1.9
2,264,368	-				+0.9
2,264,368	-				-0.8
2,264,368	-				+0.7
2,264,368	-				+0.1
2,264,512	+				+0.5
2,264,512	+				-1.9
2,264,513	-				+0.4
2,264,611	+				-0.5
2,264,611	+				-2.1
2,264,611	+				-0.2
2,264,611	+				+0.5
2,264,611	+				+0.2
2,264,612	-				-0.9
2,264,612	-				+0.7
2,264,612	-				+0.6
2,264,612	-				+0.2
2,264,612	-				+1.1
2,264,784	+		LRK54_RS10285	0.19	-0.2
2,264,784	+		LRK54_RS10285	0.19	+0.9
2,264,784	+		LRK54_RS10285	0.19	-0.2
2,264,784	+		LRK54_RS10285	0.19	-0.6
2,264,784	+		LRK54_RS10285	0.19	-1.5
2,264,784	+		LRK54_RS10285	0.19	-0.4
2,264,784	+		LRK54_RS10285	0.19	-0.2
2,264,784	+		LRK54_RS10285	0.19	-0.7
2,264,784	+		LRK54_RS10285	0.19	-1.3
2,264,784	+		LRK54_RS10285	0.19	-1.5
2,264,784	+		LRK54_RS10285	0.19	-0.3
2,264,784	+		LRK54_RS10285	0.19	-0.3
2,264,784	+		LRK54_RS10285	0.19	-0.2
2,264,784	+		LRK54_RS10285	0.19	-1.5
2,264,784	+		LRK54_RS10285	0.19	+2.4
2,264,784	+				-0.1
2,264,784	+		LRK54_RS10285	0.19	-0.4
2,264,785	-		LRK54_RS10285	0.19	-0.4
2,264,785	-		LRK54_RS10285	0.19	+1.8
2,264,785	-		LRK54_RS10285	0.19	-0.4
2,264,785	-		LRK54_RS10285	0.19	-0.1
2,264,785	-		LRK54_RS10285	0.19	-0.6
2,264,785	-		LRK54_RS10285	0.19	+1.2
2,264,903	+		LRK54_RS10285	0.28	-0.5
2,264,903	+		LRK54_RS10285	0.28	-0.9
2,264,903	+		LRK54_RS10285	0.28	-0.3
2,264,904	-		LRK54_RS10285	0.28	-1.0
2,264,904	-		LRK54_RS10285	0.28	+1.0
2,264,904	-		LRK54_RS10285	0.28	+1.2
2,264,904	-		LRK54_RS10285	0.28	-0.4
2,265,171	+		LRK54_RS10285	0.49	+0.0
2,265,171	+		LRK54_RS10285	0.49	-0.3
2,265,171	+		LRK54_RS10285	0.49	-1.1
2,265,171	+		LRK54_RS10285	0.49	-1.6
2,265,171	+		LRK54_RS10285	0.49	+1.2
2,265,171	+		LRK54_RS10285	0.49	-0.0
2,265,171	+		LRK54_RS10285	0.49	-1.6
2,265,172	-		LRK54_RS10285	0.49	-0.3
2,265,172	-		LRK54_RS10285	0.49	-0.2
2,265,172	-		LRK54_RS10285	0.49	+0.9
2,265,172	-		LRK54_RS10285	0.49	-0.8
2,265,172	-		LRK54_RS10285	0.49	+0.9
2,265,172	-		LRK54_RS10285	0.49	-0.8
2,265,172	-		LRK54_RS10285	0.49	-0.0
2,265,297	+		LRK54_RS10285	0.59	+0.6
2,265,385	+		LRK54_RS10285	0.66	+0.4
2,265,385	+		LRK54_RS10285	0.66	+0.7
2,265,386	-		LRK54_RS10285	0.66	-0.8
2,265,386	-		LRK54_RS10285	0.66	-0.6