Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09215

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
2,017,383	+		LRK54_RS09210	0.29	+0.7
2,017,383	+		LRK54_RS09210	0.29	-1.5
2,017,383	+		LRK54_RS09210	0.29	-2.7
2,017,383	+		LRK54_RS09210	0.29	+0.1
2,017,383	+		LRK54_RS09210	0.29	-0.2
2,017,383	+		LRK54_RS09210	0.29	+0.6
2,017,383	+		LRK54_RS09210	0.29	-1.1
2,017,383	+		LRK54_RS09210	0.29	+0.1
2,017,384	-		LRK54_RS09210	0.29	+0.4
2,017,384	-		LRK54_RS09210	0.29	+0.1
2,017,444	+		LRK54_RS09210	0.34	-1.3
2,017,444	+		LRK54_RS09210	0.34	-0.9
2,017,444	+		LRK54_RS09210	0.34	-0.0
2,017,444	+		LRK54_RS09210	0.34	+1.3
2,017,445	-		LRK54_RS09210	0.34	-0.9
2,017,445	-		LRK54_RS09210	0.34	+0.8
2,017,445	-		LRK54_RS09210	0.34	+0.5
2,017,457	+		LRK54_RS09210	0.35	-0.4
2,017,457	+		LRK54_RS09210	0.35	-0.3
2,017,458	-		LRK54_RS09210	0.36	-0.4
2,017,483	+		LRK54_RS09210	0.38	-0.2
2,017,483	+		LRK54_RS09210	0.38	+0.5
2,017,483	+		LRK54_RS09210	0.38	-0.4
2,017,483	+		LRK54_RS09210	0.38	-1.6
2,017,483	+		LRK54_RS09210	0.38	+0.1
2,017,483	+		LRK54_RS09210	0.38	-1.4
2,017,484	-		LRK54_RS09210	0.38	+0.8
2,017,484	-		LRK54_RS09210	0.38	-1.2
2,017,484	-		LRK54_RS09210	0.38	+0.8
2,017,484	-		LRK54_RS09210	0.38	+0.1
2,017,484	-		LRK54_RS09210	0.38	-1.0
2,017,484	-		LRK54_RS09210	0.38	-1.4
2,017,540	+		LRK54_RS09210	0.43	+1.4
2,017,540	+		LRK54_RS09210	0.43	-0.6
2,017,540	+		LRK54_RS09210	0.43	-1.2
2,017,540	+		LRK54_RS09210	0.43	+0.4
2,017,540	+		LRK54_RS09210	0.43	+4.0
2,017,540	+		LRK54_RS09210	0.43	-0.6
2,017,540	+		LRK54_RS09210	0.43	-1.1
2,017,540	+		LRK54_RS09210	0.43	-0.8
2,017,541	-		LRK54_RS09210	0.43	-1.0
2,017,541	-		LRK54_RS09210	0.43	-0.9
2,017,541	-		LRK54_RS09210	0.43	-1.1
2,017,541	-		LRK54_RS09210	0.43	-0.6
2,017,541	-		LRK54_RS09210	0.43	+0.2
2,018,119	-				-1.1
2,018,119	-				-1.6
2,018,162	+				-0.6
2,018,162	+				-0.5
2,018,162	+				-0.1
2,018,162	+				+0.0
2,018,163	-				+1.4
2,018,164	+				+0.9
2,018,164	+				-0.7
2,018,164	+				-0.8
2,018,164	+				+0.8
2,018,164	+				-0.9
2,018,164	+				+0.2
2,018,164	+				-0.2
2,018,164	+				+1.4
2,018,164	+				-0.8
2,018,165	-				-0.3
2,018,165	-				-1.0
2,018,165	-				-0.5
2,018,165	-				+0.2
2,018,165	-				-0.3
2,018,165	-				+2.4
2,018,165	-				+0.4
2,018,165	-				+0.3
2,018,165	-				-0.7
2,018,165	-				-0.2
2,018,165	-				-0.5
2,018,165	-				-0.3
2,018,165	-				-1.4
2,018,165	-				+0.1
2,018,165	-				+0.4
2,018,165	-				-1.1
2,018,165	-				+1.2
2,018,165	-				-1.4
2,018,165	-				-0.1
2,018,165	-				-0.4
2,018,390	+		LRK54_RS09215	0.13	-0.0
2,018,390	+		LRK54_RS09215	0.13	+0.6
2,018,390	+		LRK54_RS09215	0.13	+0.1
2,018,390	+		LRK54_RS09215	0.13	+0.1
2,018,390	+		LRK54_RS09215	0.13	-1.6
2,018,390	+		LRK54_RS09215	0.13	+1.0
2,018,390	+		LRK54_RS09215	0.13	-0.3
2,018,391	-		LRK54_RS09215	0.13	-1.6
2,018,391	-		LRK54_RS09215	0.13	+0.4
2,018,391	-		LRK54_RS09215	0.13	+0.3
2,018,391	-		LRK54_RS09215	0.13	+0.3
2,018,391	-		LRK54_RS09215	0.13	-0.4
2,018,391	-		LRK54_RS09215	0.13	-0.8
2,018,391	-		LRK54_RS09215	0.13	+0.2
2,018,391	-		LRK54_RS09215	0.13	+0.1
2,018,432	+		LRK54_RS09215	0.16	+0.1
2,018,432	+		LRK54_RS09215	0.16	+1.6
2,018,432	+		LRK54_RS09215	0.16	+0.4
2,018,432	+		LRK54_RS09215	0.16	+1.3
2,018,432	+		LRK54_RS09215	0.16	+0.1
2,018,433	-		LRK54_RS09215	0.16	+0.3
2,018,433	-		LRK54_RS09215	0.16	+0.0
2,018,504	+		LRK54_RS09215	0.21	+0.5
2,018,504	+		LRK54_RS09215	0.21	+0.3
2,018,504	+		LRK54_RS09215	0.21	+0.8
2,018,505	-		LRK54_RS09215	0.21	-0.6
2,018,505	-		LRK54_RS09215	0.21	+0.6
2,018,505	-		LRK54_RS09215	0.21	+0.3
2,018,505	-		LRK54_RS09215	0.21	-0.6
2,018,573	+		LRK54_RS09215	0.26	+0.2
2,018,573	+		LRK54_RS09215	0.26	+0.2
2,018,573	+		LRK54_RS09215	0.26	-0.1
2,018,573	+		LRK54_RS09215	0.26	-0.5
2,018,573	+		LRK54_RS09215	0.26	+2.0
2,018,573	+		LRK54_RS09215	0.26	-0.5
2,018,573	+		LRK54_RS09215	0.26	-0.0
2,018,573	+		LRK54_RS09215	0.26	-0.4
2,018,573	+		LRK54_RS09215	0.26	+0.5
2,018,573	+		LRK54_RS09215	0.26	+1.1
2,018,573	+		LRK54_RS09215	0.26	+1.6
2,018,573	+		LRK54_RS09215	0.26	+0.1
2,018,573	+		LRK54_RS09215	0.26	+0.3
2,018,573	+		LRK54_RS09215	0.26	-0.3
2,018,573	+		LRK54_RS09215	0.26	+1.4
2,018,574	-		LRK54_RS09215	0.26	-0.2
2,018,574	-		LRK54_RS09215	0.26	-0.0
2,018,574	-		LRK54_RS09215	0.26	+0.6
2,018,574	-		LRK54_RS09215	0.26	-0.5
2,018,574	-		LRK54_RS09215	0.26	+0.7
2,018,574	-		LRK54_RS09215	0.26	+0.9
2,018,574	-		LRK54_RS09215	0.26	+0.5
2,018,574	-		LRK54_RS09215	0.26	+1.4
2,018,574	-		LRK54_RS09215	0.26	+0.2
2,018,574	-		LRK54_RS09215	0.26	+0.9
2,018,574	-		LRK54_RS09215	0.26	+0.1
2,018,574	-		LRK54_RS09215	0.26	+0.3
2,018,574	-		LRK54_RS09215	0.26	+0.5
2,018,574	-		LRK54_RS09215	0.26	-0.8
2,018,627	+		LRK54_RS09215	0.30	+1.7
2,018,628	-		LRK54_RS09215	0.30	-0.2
2,018,628	-		LRK54_RS09215	0.30	-0.9
2,018,628	-		LRK54_RS09215	0.30	+0.7
2,018,762	+		LRK54_RS09215	0.39	-0.1
2,018,762	+		LRK54_RS09215	0.39	-0.2
2,018,762	+		LRK54_RS09215	0.39	-1.9
2,018,763	-		LRK54_RS09215	0.39	+0.8
2,018,763	-		LRK54_RS09215	0.39	+0.8
2,018,763	-		LRK54_RS09215	0.39	+0.6
2,018,763	-		LRK54_RS09215	0.39	+1.4
2,018,763	-		LRK54_RS09215	0.39	+1.0
2,018,763	-		LRK54_RS09215	0.39	+0.1
2,018,763	-		LRK54_RS09215	0.39	-0.1
2,018,763	-		LRK54_RS09215	0.39	+0.9
2,018,763	-		LRK54_RS09215	0.39	+0.6
2,018,771	+		LRK54_RS09215	0.39	+0.0
2,018,771	+		LRK54_RS09215	0.39	+0.0
2,018,771	+		LRK54_RS09215	0.39	+0.0
2,018,771	+		LRK54_RS09215	0.39	+0.9
2,018,771	+		LRK54_RS09215	0.39	+0.1
2,018,771	+		LRK54_RS09215	0.39	+0.8
2,018,771	+		LRK54_RS09215	0.39	+0.2
2,018,771	+		LRK54_RS09215	0.39	-0.0
2,018,772	-		LRK54_RS09215	0.40	+0.3
2,018,772	-		LRK54_RS09215	0.40	+0.5
2,018,772	-		LRK54_RS09215	0.40	+0.6
2,018,772	-		LRK54_RS09215	0.40	+0.6
2,018,772	-		LRK54_RS09215	0.40	-0.8
2,018,772	-		LRK54_RS09215	0.40	-0.1
2,018,772	-		LRK54_RS09215	0.40	+0.0
2,018,772	-		LRK54_RS09215	0.40	+0.0
2,018,807	+		LRK54_RS09215	0.42	-0.3
2,018,807	+		LRK54_RS09215	0.42	-0.2
2,018,807	+		LRK54_RS09215	0.42	-0.2
2,018,807	+		LRK54_RS09215	0.42	-0.9
2,018,807	+		LRK54_RS09215	0.42	+1.3
2,018,807	+		LRK54_RS09215	0.42	-0.3
2,018,807	+		LRK54_RS09215	0.42	+0.5
2,018,807	+		LRK54_RS09215	0.42	+0.4
2,018,807	+		LRK54_RS09215	0.42	+1.1
2,018,807	+		LRK54_RS09215	0.42	-1.2
2,018,807	+		LRK54_RS09215	0.42	+0.5
2,018,807	+		LRK54_RS09215	0.42	-0.5
2,018,808	-		LRK54_RS09215	0.42	+0.1
2,018,808	-		LRK54_RS09215	0.42	+0.5
2,018,808	-		LRK54_RS09215	0.42	+0.0
2,018,808	-		LRK54_RS09215	0.42	+0.1
2,018,859	-		LRK54_RS09215	0.46	-0.1
2,018,876	+		LRK54_RS09215	0.47	-0.7
2,018,876	+		LRK54_RS09215	0.47	+1.4
2,018,876	+		LRK54_RS09215	0.47	-0.4
2,018,876	+		LRK54_RS09215	0.47	-1.1
2,018,876	+		LRK54_RS09215	0.47	-1.1
2,018,876	+		LRK54_RS09215	0.47	-0.5
2,018,876	+		LRK54_RS09215	0.47	-0.9
2,018,876	+		LRK54_RS09215	0.47	+0.6
2,018,877	-		LRK54_RS09215	0.47	-0.3
2,018,877	-		LRK54_RS09215	0.47	+2.6
2,018,877	-		LRK54_RS09215	0.47	-0.5
2,018,877	-		LRK54_RS09215	0.47	+1.8
2,018,877	-		LRK54_RS09215	0.47	+0.6
2,018,877	-		LRK54_RS09215	0.47	+0.8
2,018,877	-		LRK54_RS09215	0.47	+0.4
2,018,877	-		LRK54_RS09215	0.47	+0.1
2,018,877	-		LRK54_RS09215	0.47	+0.1
2,018,877	-		LRK54_RS09215	0.47	-1.1
2,018,877	-		LRK54_RS09215	0.47	+1.7
2,018,888	+		LRK54_RS09215	0.48	-0.1
2,018,888	+		LRK54_RS09215	0.48	-0.3
2,018,888	+		LRK54_RS09215	0.48	+0.9
2,018,888	+		LRK54_RS09215	0.48	+0.1
2,018,888	+		LRK54_RS09215	0.48	-0.0
2,018,888	+		LRK54_RS09215	0.48	+0.3
2,018,888	+		LRK54_RS09215	0.48	-1.5
2,018,888	+		LRK54_RS09215	0.48	-1.7
2,018,888	+		LRK54_RS09215	0.48	+0.7
2,018,888	+		LRK54_RS09215	0.48	+0.3
2,018,888	+		LRK54_RS09215	0.48	-0.4
2,018,888	+		LRK54_RS09215	0.48	-0.2
2,018,888	+		LRK54_RS09215	0.48	-0.1
2,018,888	+		LRK54_RS09215	0.48	+0.4
2,018,888	+		LRK54_RS09215	0.48	+0.5
2,018,889	-		LRK54_RS09215	0.48	-0.2
2,018,889	-		LRK54_RS09215	0.48	+0.6
2,018,889	-		LRK54_RS09215	0.48	-0.8
2,018,889	-		LRK54_RS09215	0.48	-0.4
2,018,889	-		LRK54_RS09215	0.48	+1.0
2,018,889	-		LRK54_RS09215	0.48	+0.0
2,018,889	-		LRK54_RS09215	0.48	+1.2
2,018,889	-		LRK54_RS09215	0.48	-1.5
2,018,889	-		LRK54_RS09215	0.48	+0.9
2,018,889	-		LRK54_RS09215	0.48	+0.4
2,018,889	-		LRK54_RS09215	0.48	+0.2
2,018,889	-		LRK54_RS09215	0.48	+0.5
2,018,889	-		LRK54_RS09215	0.48	+0.3
2,018,889	-		LRK54_RS09215	0.48	+0.9
2,018,889	-		LRK54_RS09215	0.48	-0.1
2,018,889	-		LRK54_RS09215	0.48	+0.6
2,018,889	-		LRK54_RS09215	0.48	-0.3
2,018,889	-		LRK54_RS09215	0.48	+0.2
2,018,889	-		LRK54_RS09215	0.48	+0.7
2,018,941	+		LRK54_RS09215	0.51	-0.8
2,018,942	+		LRK54_RS09215	0.51	-0.7
2,018,942	+		LRK54_RS09215	0.51	+0.6
2,018,942	+		LRK54_RS09215	0.51	+0.0
2,018,942	+		LRK54_RS09215	0.51	-0.3
2,018,942	+		LRK54_RS09215	0.51	-0.8
2,018,942	+		LRK54_RS09215	0.51	+0.7
2,018,942	+		LRK54_RS09215	0.51	-0.3
2,018,942	+		LRK54_RS09215	0.51	+0.2
2,018,942	+		LRK54_RS09215	0.51	+0.2
2,018,942	+		LRK54_RS09215	0.51	-0.4
2,018,943	-		LRK54_RS09215	0.51	+0.5
2,018,943	-		LRK54_RS09215	0.51	+1.7
2,018,943	-		LRK54_RS09215	0.51	+0.1
2,018,943	-		LRK54_RS09215	0.51	+0.4
2,018,943	-		LRK54_RS09215	0.51	+0.2
2,018,943	-		LRK54_RS09215	0.51	+0.5
2,018,943	-		LRK54_RS09215	0.51	+0.0
2,018,943	-		LRK54_RS09215	0.51	-0.1
2,018,943	-		LRK54_RS09215	0.51	+0.3
2,018,943	-		LRK54_RS09215	0.51	-1.8
2,018,943	-		LRK54_RS09215	0.51	+0.7
2,018,943	-		LRK54_RS09215	0.51	+0.1
2,018,943	-		LRK54_RS09215	0.51	+0.3
2,018,943	-		LRK54_RS09215	0.51	-0.0
2,019,008	+		LRK54_RS09215	0.56	-0.2
2,019,008	+		LRK54_RS09215	0.56	-0.5
2,019,008	+		LRK54_RS09215	0.56	+0.3
2,019,008	+		LRK54_RS09215	0.56	+0.6
2,019,009	-		LRK54_RS09215	0.56	-0.7
2,019,009	-		LRK54_RS09215	0.56	+1.4
2,019,009	-		LRK54_RS09215	0.56	+0.2
2,019,009	-		LRK54_RS09215	0.56	-0.1
2,019,009	-		LRK54_RS09215	0.56	+0.7
2,019,009	-		LRK54_RS09215	0.56	-0.7
2,019,009	-		LRK54_RS09215	0.56	+0.5
2,019,563	+				-0.5
2,019,563	+				-1.4
2,019,563	+				-1.9
2,019,564	-				+0.2
2,019,564	-				+2.0
2,019,564	-				+0.2
2,019,664	-				+0.2
2,019,664	-				+0.8
2,019,670	+				+0.3
2,019,670	+				+1.3
2,019,670	+				-0.3
2,019,670	+				+0.7
2,019,670	+				+0.4
2,019,670	+				+1.1
2,019,670	+				+0.3
2,019,670	+				+0.4
2,019,670	+				+0.1
2,019,670	+				-0.1
2,019,670	+				-0.1
2,019,670	+				+1.3
2,019,671	-				-2.1
2,019,671	-				+0.3
2,019,671	-				-0.4
2,019,671	-				+0.2
2,019,671	-				+0.3
2,019,671	-				-0.1
2,019,671	-				+1.7
2,019,671	-				-0.6
2,019,685	-				+0.3
2,019,685	-				+0.6
2,019,685	-				+0.9
2,019,685	-				+2.2
2,019,685	-				+1.0
2,019,688	+				+1.5
2,019,689	+				+0.3
2,019,689	+				-1.3
2,019,689	+				+0.3
2,019,689	+				+0.7
2,019,689	+				+0.4
2,019,689	+				+0.7
2,019,689	+				+0.2
2,019,689	+				-1.0
2,019,689	+				+1.2
2,019,690	-				+0.2
2,019,690	-				+0.2
2,019,690	-				-0.3
2,019,690	-				+0.1
2,019,690	-				+0.9
2,019,690	-				+0.1
2,019,690	-				-1.4
2,019,690	-				-0.4
2,019,690	-				+0.4
2,019,690	-				+1.8
2,019,690	-				-0.8
2,019,690	-				-1.8
2,019,752	+				+0.1
2,019,763	+				-0.1
2,019,763	+				-0.3
2,019,763	+				-1.7
2,019,763	+				+0.5
2,019,764	-				-0.1
2,019,800	+				+1.8
2,019,800	+				-0.8
2,019,800	+				+0.0
2,019,800	+				+0.2
2,019,800	+				+0.4
2,019,800	+				-0.2
2,019,800	+				+1.6
2,019,800	+				-0.4
2,019,800	+				+0.2
2,019,800	+				-0.7
2,019,800	+				-0.8
2,019,800	+				-0.2
2,019,800	+				+0.5
2,019,800	+				-0.5
2,019,800	+				+0.6
2,019,800	+				+0.2
2,019,800	+				+0.7