Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07190

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
1,543,423	+				-0.9
1,543,423	+				+0.1
1,543,423	+				+0.1
1,543,423	+				+0.1
1,543,423	+				-0.3
1,543,423	+				+0.5
1,543,423	+				+1.6
1,543,423	+				-0.3
1,543,423	+				+1.1
1,543,423	+				-0.5
1,543,423	+				+0.3
1,543,423	+				+0.8
1,543,423	+				+0.2
1,543,423	+				+0.3
1,543,423	+				+0.3
1,543,423	+				-0.1
1,543,424	-				+0.3
1,543,424	-				-0.3
1,543,424	-				+0.5
1,543,424	-				+0.2
1,543,424	-				+0.0
1,543,424	-				+0.6
1,543,424	-				+1.2
1,543,424	-				+0.2
1,543,424	-				+0.9
1,543,424	-				-0.1
1,543,424	-				+0.3
1,543,424	-				+0.3
1,543,424	-				+0.3
1,543,424	-				+1.0
1,543,424	-				+1.2
1,543,424	-				-0.0
1,543,424	-				+0.3
1,543,504	+				-0.6
1,543,504	+				+0.6
1,543,504	+				-0.7
1,543,504	+				-0.4
1,543,504	+				-0.0
1,543,504	+				+0.5
1,543,504	+				+0.3
1,543,504	+				+0.1
1,543,504	+				+0.2
1,543,504	+				+0.6
1,543,504	+				+0.5
1,543,504	+				-0.4
1,543,504	+				-0.3
1,543,504	+				-1.5
1,543,504	+				-0.8
1,543,504	+				-0.4
1,543,504	+				+0.1
1,543,504	+				-0.5
1,543,504	+				+0.1
1,543,504	+				-0.7
1,543,504	+				+0.7
1,543,504	+				+1.8
1,543,505	-				-0.6
1,543,505	-				+0.2
1,543,505	-				-0.5
1,543,505	-				+1.0
1,543,505	-				-0.2
1,543,505	-				+0.5
1,543,505	-				+0.8
1,543,505	-				-0.3
1,543,505	-				-0.7
1,543,505	-				-0.5
1,543,505	-				+0.2
1,543,505	-				-0.8
1,543,505	-				-1.1
1,543,505	-				+1.3
1,543,505	-				+0.7
1,543,505	-				+2.3
1,543,505	-				+1.1
1,543,505	-				+0.5
1,543,505	-				-0.8
1,543,505	-				+0.5
1,543,506	-				+0.2
1,543,511	+				-1.1
1,543,511	+				+1.8
1,543,511	+				+1.0
1,543,511	+				+0.6
1,543,511	+				-0.3
1,543,511	+				+1.1
1,543,512	-				-0.9
1,543,512	-				+1.1
1,543,512	-				+0.5
1,543,512	-				-0.7
1,543,512	-				-0.3
1,543,512	-				+0.3
1,543,512	-				+0.2
1,543,512	-				-1.8
1,543,512	-				+1.0
1,543,512	-				+0.3
1,543,528	+				-0.0
1,543,528	+				+0.4
1,543,528	+				-0.6
1,543,528	+				+0.0
1,543,528	+				-0.4
1,543,528	+				+0.3
1,543,529	-				-0.1
1,543,529	-				-1.3
1,543,529	-				+0.4
1,543,529	-				+0.7
1,543,539	+				+0.0
1,543,540	-				-1.9
1,543,540	-				-0.4
1,543,561	+				+0.3
1,543,562	-				+0.2
1,543,562	-				-0.7
1,543,562	-				-0.5
1,543,587	+				-0.5
1,543,587	+				-0.6
1,543,587	+				-1.0
1,543,587	+				+0.3
1,543,587	+				-0.8
1,543,587	+				+0.0
1,543,587	+				+0.1
1,543,588	-				-0.3
1,543,588	-				-0.7
1,543,588	-				-0.5
1,543,588	-				+0.7
1,543,588	-				+0.9
1,543,588	-				-1.0
1,543,588	-				+2.3
1,543,669	+				+1.0
1,543,669	+				-0.5
1,543,669	+				+1.4
1,543,669	+				+0.7
1,543,669	+				-1.6
1,543,669	+				-0.1
1,543,669	+				-1.1
1,543,669	+				+0.0
1,543,669	+				-1.3
1,543,670	-				+0.1
1,543,670	-				-0.1
1,543,670	-				+0.4
1,543,670	-				+0.1
1,543,670	-				-0.6
1,543,670	-				-1.1
1,543,670	-				-0.1
1,543,670	-				+1.6
1,543,710	+				-0.7
1,543,710	+				-0.0
1,543,710	+				+0.2
1,543,710	+				-0.9
1,543,710	+				+2.3
1,543,710	+				-1.3
1,543,710	+				+0.6
1,543,710	+				+0.1
1,543,710	+				+0.7
1,543,711	-				-0.3
1,543,711	-				-1.6
1,543,711	-				-0.0
1,543,711	-				-0.7
1,543,711	-				-0.9
1,543,719	+				-0.2
1,543,719	+				-0.2
1,543,719	+				+2.7
1,543,719	+				+0.1
1,543,719	+				+1.5
1,543,719	+				+1.2
1,543,719	+				+0.1
1,543,719	+				-0.1
1,543,719	+				-0.3
1,543,719	+				+0.4
1,543,719	+				+2.3
1,543,719	+				-1.7
1,543,719	+				-0.5
1,543,719	+				+0.3
1,543,719	+				-0.3
1,543,719	+				-0.0
1,543,719	+				+1.3
1,543,720	-				+1.1
1,543,720	-				+1.7
1,543,720	-				+0.3
1,543,720	-				+1.1
1,543,720	-				+1.0
1,543,720	-				-0.0
1,543,720	-				+0.2
1,543,720	-				-0.9
1,543,720	-				-0.4
1,543,720	-				+1.4
1,543,720	-				+0.4
1,543,720	-				+0.2
1,543,720	-				-0.9
1,543,720	-				+0.4
1,543,720	-				+0.9
1,543,720	-				-1.7
1,544,040	+		LRK54_RS07185	0.49	-0.7
1,544,040	+		LRK54_RS07185	0.49	+2.3
1,544,040	+		LRK54_RS07185	0.49	+0.2
1,544,040	+		LRK54_RS07185	0.49	+0.2
1,544,041	-		LRK54_RS07185	0.49	+1.1
1,544,041	-		LRK54_RS07185	0.49	+1.6
1,544,088	+		LRK54_RS07185	0.56	+1.3
1,544,088	+		LRK54_RS07185	0.56	-0.3
1,544,088	+		LRK54_RS07185	0.56	-0.5
1,544,088	+		LRK54_RS07185	0.56	+1.3
1,544,088	+		LRK54_RS07185	0.56	-0.0
1,544,088	+		LRK54_RS07185	0.56	+0.3
1,544,088	+		LRK54_RS07185	0.56	+0.8
1,544,088	+		LRK54_RS07185	0.56	-0.3
1,544,088	+		LRK54_RS07185	0.56	+0.0
1,544,089	-		LRK54_RS07185	0.57	+2.6
1,544,089	-		LRK54_RS07185	0.57	+0.5
1,544,089	-		LRK54_RS07185	0.57	+1.3
1,544,089	-		LRK54_RS07185	0.57	-0.2
1,544,089	-		LRK54_RS07185	0.57	-0.1
1,544,089	-		LRK54_RS07185	0.57	+0.5
1,544,089	-		LRK54_RS07185	0.57	+0.1
1,544,127	+		LRK54_RS07185	0.62	+0.9
1,544,127	+		LRK54_RS07185	0.62	-0.2
1,544,127	+		LRK54_RS07185	0.62	-0.1
1,544,127	+		LRK54_RS07185	0.62	+0.2
1,544,128	-		LRK54_RS07185	0.62	-0.3
1,544,128	-		LRK54_RS07185	0.62	+0.5
1,544,128	-		LRK54_RS07185	0.62	-0.1
1,544,128	-		LRK54_RS07185	0.62	-0.8
1,544,128	-		LRK54_RS07185	0.62	-0.3
1,544,649	+		LRK54_RS07190	0.20	+1.1
1,544,649	+		LRK54_RS07190	0.20	+0.9
1,544,649	+		LRK54_RS07190	0.20	+0.5
1,544,649	+		LRK54_RS07190	0.20	+0.4
1,544,649	+		LRK54_RS07190	0.20	+0.6
1,544,649	+		LRK54_RS07190	0.20	+0.5
1,544,649	+		LRK54_RS07190	0.20	-0.4
1,544,650	-		LRK54_RS07190	0.20	+0.5
1,544,650	-		LRK54_RS07190	0.20	-1.0
1,544,650	-		LRK54_RS07190	0.20	+0.4
1,544,650	-		LRK54_RS07190	0.20	+0.8
1,544,650	-		LRK54_RS07190	0.20	+0.9
1,544,650	-		LRK54_RS07190	0.20	-0.9
1,544,650	-		LRK54_RS07190	0.20	-1.8
1,544,650	-		LRK54_RS07190	0.20	+0.1
1,544,685	+		LRK54_RS07190	0.23	+0.6
1,544,685	+		LRK54_RS07190	0.23	+1.5
1,544,685	+		LRK54_RS07190	0.23	+0.4
1,544,685	+		LRK54_RS07190	0.23	-0.3
1,544,685	+		LRK54_RS07190	0.23	+0.8
1,544,686	-		LRK54_RS07190	0.23	+0.7
1,544,686	-		LRK54_RS07190	0.23	-0.7
1,544,686	-		LRK54_RS07190	0.23	-1.4
1,544,686	-		LRK54_RS07190	0.23	+0.8
1,544,835	+		LRK54_RS07190	0.34	+0.1
1,544,835	+		LRK54_RS07190	0.34	+0.8
1,544,836	-		LRK54_RS07190	0.34	+1.1
1,544,868	+		LRK54_RS07190	0.36	+0.4
1,544,868	+		LRK54_RS07190	0.36	-1.0
1,544,868	+		LRK54_RS07190	0.36	-0.7
1,544,868	+		LRK54_RS07190	0.36	-0.4
1,544,868	+		LRK54_RS07190	0.36	+0.1
1,544,868	+		LRK54_RS07190	0.36	+0.4
1,544,868	+		LRK54_RS07190	0.36	-0.7
1,544,868	+		LRK54_RS07190	0.36	+0.4
1,544,868	+		LRK54_RS07190	0.36	-0.0
1,544,868	+		LRK54_RS07190	0.36	+1.0
1,544,868	+		LRK54_RS07190	0.36	+1.3
1,544,868	+		LRK54_RS07190	0.36	+0.6
1,544,868	+		LRK54_RS07190	0.36	-0.1
1,544,868	+		LRK54_RS07190	0.36	+0.8
1,544,868	+		LRK54_RS07190	0.36	+0.0
1,544,868	+		LRK54_RS07190	0.36	+0.1
1,544,868	+		LRK54_RS07190	0.36	+1.1
1,544,868	+		LRK54_RS07190	0.36	-1.1
1,544,868	+		LRK54_RS07190	0.36	+0.5
1,544,868	+		LRK54_RS07190	0.36	+2.3
1,544,868	+		LRK54_RS07190	0.36	-0.3
1,544,868	+		LRK54_RS07190	0.36	-0.1
1,544,868	+		LRK54_RS07190	0.36	+1.6
1,544,868	+		LRK54_RS07190	0.36	+0.2
1,544,868	+		LRK54_RS07190	0.36	+0.7
1,544,868	+		LRK54_RS07190	0.36	-0.5
1,544,868	+		LRK54_RS07190	0.36	+0.3
1,544,868	+		LRK54_RS07190	0.36	-1.0
1,544,868	+		LRK54_RS07190	0.36	+0.1
1,544,868	+		LRK54_RS07190	0.36	-2.0
1,544,868	+		LRK54_RS07190	0.36	-0.9
1,544,868	+		LRK54_RS07190	0.36	+0.2
1,544,868	+		LRK54_RS07190	0.36	-0.9
1,544,869	-		LRK54_RS07190	0.36	+1.8
1,544,869	-		LRK54_RS07190	0.36	-0.7
1,544,869	-		LRK54_RS07190	0.36	+1.3
1,544,869	-		LRK54_RS07190	0.36	+0.5
1,544,869	-		LRK54_RS07190	0.36	+1.1
1,544,869	-		LRK54_RS07190	0.36	-0.1
1,544,869	-		LRK54_RS07190	0.36	-0.0
1,544,869	-		LRK54_RS07190	0.36	-0.5
1,544,869	-		LRK54_RS07190	0.36	+0.2
1,544,869	-		LRK54_RS07190	0.36	+0.2
1,544,869	-		LRK54_RS07190	0.36	+1.1
1,544,869	-		LRK54_RS07190	0.36	+1.7
1,544,869	-		LRK54_RS07190	0.36	+0.3
1,544,869	-		LRK54_RS07190	0.36	+0.4
1,544,869	-		LRK54_RS07190	0.36	+0.8
1,544,869	-		LRK54_RS07190	0.36	+0.2
1,544,869	-		LRK54_RS07190	0.36	+0.4
1,544,869	-		LRK54_RS07190	0.36	-0.7
1,544,869	-		LRK54_RS07190	0.36	+2.3
1,544,869	-		LRK54_RS07190	0.36	-0.0
1,544,869	-		LRK54_RS07190	0.36	+1.6
1,544,869	-		LRK54_RS07190	0.36	+0.3
1,544,869	-		LRK54_RS07190	0.36	-0.2
1,544,869	-		LRK54_RS07190	0.36	+0.0
1,544,869	-		LRK54_RS07190	0.36	+0.8
1,544,869	-		LRK54_RS07190	0.36	+0.4
1,544,869	-		LRK54_RS07190	0.36	+0.3
1,544,869	-		LRK54_RS07190	0.36	+0.1
1,545,012	+		LRK54_RS07190	0.47	+0.5
1,545,012	+		LRK54_RS07190	0.47	-0.7
1,545,018	+		LRK54_RS07190	0.48	+0.6
1,545,018	+		LRK54_RS07190	0.48	-0.0
1,545,018	+		LRK54_RS07190	0.48	+0.4
1,545,018	+		LRK54_RS07190	0.48	+1.9
1,545,018	+		LRK54_RS07190	0.48	-0.3
1,545,018	+		LRK54_RS07190	0.48	+0.5
1,545,018	+		LRK54_RS07190	0.48	-0.3
1,545,018	+		LRK54_RS07190	0.48	+0.5
1,545,019	-		LRK54_RS07190	0.48	+0.6
1,545,019	-		LRK54_RS07190	0.48	+0.3
1,545,019	-		LRK54_RS07190	0.48	+0.0
1,545,019	-		LRK54_RS07190	0.48	+0.2
1,545,019	-		LRK54_RS07190	0.48	-0.0
1,545,019	-		LRK54_RS07190	0.48	-0.3
1,545,019	-		LRK54_RS07190	0.48	+0.3
1,545,019	-		LRK54_RS07190	0.48	+3.3
1,545,019	-		LRK54_RS07190	0.48	+0.3
1,545,019	-		LRK54_RS07190	0.48	-0.3
1,545,019	-		LRK54_RS07190	0.48	-0.8
1,545,123	+		LRK54_RS07190	0.55	-0.3
1,545,123	+		LRK54_RS07190	0.55	-0.1
1,545,360	+		LRK54_RS07190	0.73	-0.5
1,545,360	+		LRK54_RS07190	0.73	-0.5
1,545,360	+		LRK54_RS07190	0.73	+0.7
1,545,361	-		LRK54_RS07190	0.73	+0.2
1,545,474	+		LRK54_RS07190	0.82	-0.2
1,545,474	+		LRK54_RS07190	0.82	+0.4
1,545,474	+		LRK54_RS07190	0.82	+0.6
1,545,474	+		LRK54_RS07190	0.82	+2.9
1,545,474	+		LRK54_RS07190	0.82	-0.3
1,545,474	+		LRK54_RS07190	0.82	-1.5
1,545,474	+		LRK54_RS07190	0.82	-0.9
1,545,474	+		LRK54_RS07190	0.82	-1.1
1,545,474	+		LRK54_RS07190	0.82	+0.7
1,545,474	+		LRK54_RS07190	0.82	+1.3
1,545,474	+		LRK54_RS07190	0.82	-0.0
1,545,474	+		LRK54_RS07190	0.82	+0.8
1,545,474	+		LRK54_RS07190	0.82	+0.1
1,545,474	+		LRK54_RS07190	0.82	+0.4
1,545,474	+		LRK54_RS07190	0.82	+1.7
1,545,474	+		LRK54_RS07190	0.82	+0.9
1,545,474	+		LRK54_RS07190	0.82	+0.6
1,545,474	+		LRK54_RS07190	0.82	+0.7
1,545,474	+		LRK54_RS07190	0.82	+0.3
1,545,475	-		LRK54_RS07190	0.82	-0.5
1,545,475	-		LRK54_RS07190	0.82	-0.3
1,545,475	-		LRK54_RS07190	0.82	-0.6
1,545,475	-		LRK54_RS07190	0.82	+0.1
1,545,475	-		LRK54_RS07190	0.82	-0.1
1,545,475	-		LRK54_RS07190	0.82	-1.5
1,545,475	-		LRK54_RS07190	0.82	-0.4
1,545,475	-		LRK54_RS07190	0.82	+0.4
1,545,475	-		LRK54_RS07190	0.82	+0.8
1,545,475	-		LRK54_RS07190	0.82	+0.7
1,545,475	-		LRK54_RS07190	0.82	-0.6
1,545,492	+		LRK54_RS07190	0.83	-0.1
1,545,492	+		LRK54_RS07190	0.83	-0.8
1,545,493	-		LRK54_RS07190	0.83	-0.0
1,545,493	-		LRK54_RS07190	0.83	-0.9
1,545,493	-		LRK54_RS07190	0.83	+1.2
1,545,493	-		LRK54_RS07190	0.83	-1.6
1,545,493	-		LRK54_RS07190	0.83	+0.1
1,545,493	-		LRK54_RS07190	0.83	-1.1
1,545,493	-		LRK54_RS07190	0.83	-0.5
1,545,493	-		LRK54_RS07190	0.83	+0.4
1,545,493	-		LRK54_RS07190	0.83	-0.0
1,545,609	+				+0.4
1,545,609	+				+0.9
1,545,609	+				+0.3
1,545,610	-				+1.3
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