Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07145

Experiment: R2A with FW104 filtrate 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with FW104 filtrate 0.5 X
1,530,281	+		LRK54_RS07140	0.43	+0.1
1,530,281	+		LRK54_RS07140	0.43	-0.2
1,530,281	+		LRK54_RS07140	0.43	-1.2
1,530,281	+		LRK54_RS07140	0.43	-0.1
1,530,281	+		LRK54_RS07140	0.43	+0.5
1,530,281	+		LRK54_RS07140	0.43	-1.3
1,530,281	+		LRK54_RS07140	0.43	-0.5
1,530,281	+		LRK54_RS07140	0.43	+0.1
1,530,281	+		LRK54_RS07140	0.43	+0.3
1,530,281	+		LRK54_RS07140	0.43	+0.3
1,530,281	+		LRK54_RS07140	0.43	+0.9
1,530,281	+		LRK54_RS07140	0.43	-0.9
1,530,281	+		LRK54_RS07140	0.43	-0.5
1,530,281	+		LRK54_RS07140	0.43	+0.4
1,530,281	+		LRK54_RS07140	0.43	+0.9
1,530,281	+		LRK54_RS07140	0.43	+0.5
1,530,281	+		LRK54_RS07140	0.43	-0.8
1,530,281	+		LRK54_RS07140	0.43	+1.4
1,530,281	+		LRK54_RS07140	0.43	+0.4
1,530,281	+		LRK54_RS07140	0.43	-0.9
1,530,281	+		LRK54_RS07140	0.43	+0.2
1,530,281	+		LRK54_RS07140	0.43	-0.9
1,530,281	+		LRK54_RS07140	0.43	-1.1
1,530,281	+		LRK54_RS07140	0.43	-0.8
1,530,281	+		LRK54_RS07140	0.43	+0.7
1,530,281	+		LRK54_RS07140	0.43	-0.6
1,530,282	-		LRK54_RS07140	0.43	-0.8
1,530,282	-		LRK54_RS07140	0.43	-0.3
1,530,282	-		LRK54_RS07140	0.43	-0.1
1,530,282	-		LRK54_RS07140	0.43	+0.1
1,530,282	-		LRK54_RS07140	0.43	+1.3
1,530,282	-		LRK54_RS07140	0.43	-0.5
1,530,282	-		LRK54_RS07140	0.43	+0.3
1,530,282	-		LRK54_RS07140	0.43	+0.1
1,530,282	-		LRK54_RS07140	0.43	-0.6
1,530,282	-		LRK54_RS07140	0.43	-1.3
1,530,282	-		LRK54_RS07140	0.43	-1.6
1,530,282	-		LRK54_RS07140	0.43	-0.1
1,530,282	-		LRK54_RS07140	0.43	+0.2
1,530,282	-		LRK54_RS07140	0.43	+1.1
1,530,282	-		LRK54_RS07140	0.43	-0.2
1,530,282	-		LRK54_RS07140	0.43	-0.2
1,530,282	-		LRK54_RS07140	0.43	-0.3
1,530,282	-		LRK54_RS07140	0.43	+0.5
1,530,282	-		LRK54_RS07140	0.43	+0.2
1,530,282	-		LRK54_RS07140	0.43	+1.1
1,530,282	-		LRK54_RS07140	0.43	+0.3
1,530,282	-		LRK54_RS07140	0.43	-0.5
1,530,282	-		LRK54_RS07140	0.43	+0.3
1,530,282	-		LRK54_RS07140	0.43	+1.0
1,530,282	-		LRK54_RS07140	0.43	-2.2
1,530,439	+		LRK54_RS07140	0.54	-0.5
1,530,439	+		LRK54_RS07140	0.54	+0.2
1,530,439	+		LRK54_RS07140	0.54	+0.3
1,530,439	+		LRK54_RS07140	0.54	+0.1
1,530,439	+		LRK54_RS07140	0.54	-0.6
1,530,439	+		LRK54_RS07140	0.54	+0.1
1,530,439	+		LRK54_RS07140	0.54	-0.4
1,530,439	+		LRK54_RS07140	0.54	+1.0
1,530,439	+		LRK54_RS07140	0.54	+0.6
1,530,439	+		LRK54_RS07140	0.54	+0.4
1,530,439	+		LRK54_RS07140	0.54	+1.7
1,530,439	+		LRK54_RS07140	0.54	-0.5
1,530,439	+		LRK54_RS07140	0.54	-1.6
1,530,439	+		LRK54_RS07140	0.54	-0.1
1,530,439	+		LRK54_RS07140	0.54	-0.0
1,530,440	-		LRK54_RS07140	0.54	+0.1
1,530,440	-		LRK54_RS07140	0.54	-0.0
1,530,440	-		LRK54_RS07140	0.54	+0.1
1,530,440	-		LRK54_RS07140	0.54	+0.3
1,530,440	-		LRK54_RS07140	0.54	+0.4
1,530,440	-		LRK54_RS07140	0.54	+0.9
1,530,440	-		LRK54_RS07140	0.54	+0.1
1,530,440	-		LRK54_RS07140	0.54	-0.1
1,530,440	-		LRK54_RS07140	0.54	+1.9
1,530,440	-		LRK54_RS07140	0.54	+0.1
1,530,440	-		LRK54_RS07140	0.54	+0.5
1,530,440	-		LRK54_RS07140	0.54	-1.3
1,530,440	-		LRK54_RS07140	0.54	-0.1
1,530,440	-		LRK54_RS07140	0.54	-0.8
1,530,440	-		LRK54_RS07140	0.54	-0.0
1,530,440	-		LRK54_RS07140	0.54	-2.0
1,530,440	-		LRK54_RS07140	0.54	+1.3
1,530,440	-		LRK54_RS07140	0.54	-0.2
1,530,440	-		LRK54_RS07140	0.54	+0.1
1,530,440	-		LRK54_RS07140	0.54	+1.3
1,530,508	+		LRK54_RS07140	0.59	+0.7
1,530,508	+		LRK54_RS07140	0.59	-0.5
1,530,508	+		LRK54_RS07140	0.59	+1.4
1,530,509	-		LRK54_RS07140	0.59	-0.6
1,530,509	-		LRK54_RS07140	0.59	+0.1
1,530,509	-		LRK54_RS07140	0.59	-0.7
1,530,509	-		LRK54_RS07140	0.59	-1.3
1,530,509	-		LRK54_RS07140	0.59	+2.3
1,530,509	-		LRK54_RS07140	0.59	-0.5
1,530,509	-		LRK54_RS07140	0.59	+0.2
1,530,509	-		LRK54_RS07140	0.59	+0.6
1,530,535	+		LRK54_RS07140	0.61	-0.1
1,530,535	+		LRK54_RS07140	0.61	+0.1
1,530,535	+		LRK54_RS07140	0.61	+0.9
1,530,535	+		LRK54_RS07140	0.61	-0.6
1,530,536	-		LRK54_RS07140	0.61	+1.3
1,530,536	-		LRK54_RS07140	0.61	+1.3
1,530,536	-		LRK54_RS07140	0.61	-0.3
1,530,536	-		LRK54_RS07140	0.61	-1.4
1,530,536	-		LRK54_RS07140	0.61	+0.1
1,530,536	-		LRK54_RS07140	0.61	+2.0
1,530,536	-		LRK54_RS07140	0.61	-0.2
1,530,562	+		LRK54_RS07140	0.62	-0.1
1,530,562	+		LRK54_RS07140	0.62	+0.5
1,530,562	+		LRK54_RS07140	0.62	-0.4
1,530,562	+		LRK54_RS07140	0.62	-0.5
1,530,563	-		LRK54_RS07140	0.63	-0.1
1,530,563	-		LRK54_RS07140	0.63	-0.1
1,530,563	-		LRK54_RS07140	0.63	-0.3
1,530,563	-		LRK54_RS07140	0.63	+0.7
1,530,563	-		LRK54_RS07140	0.63	+2.0
1,530,563	-		LRK54_RS07140	0.63	-0.3
1,530,563	-		LRK54_RS07140	0.63	+1.5
1,530,616	+		LRK54_RS07140	0.66	-0.9
1,530,616	+		LRK54_RS07140	0.66	+0.3
1,530,616	+		LRK54_RS07140	0.66	-0.6
1,530,616	+		LRK54_RS07140	0.66	+0.3
1,530,616	+		LRK54_RS07140	0.66	+0.5
1,530,616	+		LRK54_RS07140	0.66	-0.5
1,530,616	+		LRK54_RS07140	0.66	-0.8
1,530,617	-		LRK54_RS07140	0.66	+1.3
1,530,617	-		LRK54_RS07140	0.66	-0.1
1,530,617	-		LRK54_RS07140	0.66	+1.0
1,530,617	-		LRK54_RS07140	0.66	-0.8
1,530,617	-		LRK54_RS07140	0.66	+0.3
1,530,617	-		LRK54_RS07140	0.66	-0.7
1,530,745	+		LRK54_RS07140	0.75	-1.1
1,530,745	+		LRK54_RS07140	0.75	-1.0
1,530,745	+		LRK54_RS07140	0.75	+0.3
1,530,745	+		LRK54_RS07140	0.75	-0.2
1,530,746	-		LRK54_RS07140	0.75	+0.7
1,530,805	+		LRK54_RS07140	0.80	-0.0
1,530,805	+		LRK54_RS07140	0.80	+0.6
1,530,805	+		LRK54_RS07140	0.80	-0.0
1,530,805	+		LRK54_RS07140	0.80	+0.8
1,530,805	+		LRK54_RS07140	0.80	+1.7
1,530,805	+		LRK54_RS07140	0.80	+1.7
1,530,805	+		LRK54_RS07140	0.80	+0.8
1,530,805	+		LRK54_RS07140	0.80	-0.1
1,530,805	+		LRK54_RS07140	0.80	-0.2
1,530,805	+		LRK54_RS07140	0.80	-0.5
1,530,805	+		LRK54_RS07140	0.80	+3.9
1,530,805	+		LRK54_RS07140	0.80	-1.1
1,530,806	-		LRK54_RS07140	0.80	-0.8
1,530,806	-		LRK54_RS07140	0.80	+1.3
1,530,806	-		LRK54_RS07140	0.80	+0.9
1,530,806	-		LRK54_RS07140	0.80	-0.2
1,530,806	-		LRK54_RS07140	0.80	+0.4
1,530,806	-		LRK54_RS07140	0.80	+0.3
1,530,806	-		LRK54_RS07140	0.80	+0.4
1,530,806	-		LRK54_RS07140	0.80	+0.9
1,530,806	-		LRK54_RS07140	0.80	-0.7
1,530,806	-		LRK54_RS07140	0.80	+1.5
1,530,806	-		LRK54_RS07140	0.80	+0.7
1,530,806	-		LRK54_RS07140	0.80	-0.7
1,530,806	-		LRK54_RS07140	0.80	+0.4
1,530,806	-		LRK54_RS07140	0.80	-0.4
1,530,889	+		LRK54_RS07140	0.86	-0.3
1,530,889	+		LRK54_RS07140	0.86	-0.5
1,530,889	+		LRK54_RS07140	0.86	+0.0
1,530,889	+		LRK54_RS07140	0.86	+1.7
1,530,889	+		LRK54_RS07140	0.86	+0.5
1,530,889	+		LRK54_RS07140	0.86	-0.4
1,530,889	+		LRK54_RS07140	0.86	-0.8
1,530,889	+		LRK54_RS07140	0.86	+4.3
1,530,889	+		LRK54_RS07140	0.86	+0.9
1,530,889	+		LRK54_RS07140	0.86	-1.0
1,530,889	+		LRK54_RS07140	0.86	+1.5
1,530,889	+		LRK54_RS07140	0.86	+2.3
1,530,889	+		LRK54_RS07140	0.86	-1.3
1,530,889	+		LRK54_RS07140	0.86	+0.1
1,530,889	+		LRK54_RS07140	0.86	-0.8
1,530,889	+		LRK54_RS07140	0.86	+0.7
1,530,889	+		LRK54_RS07140	0.86	-0.9
1,530,889	+		LRK54_RS07140	0.86	-0.6
1,530,889	+		LRK54_RS07140	0.86	+0.3
1,530,890	-		LRK54_RS07140	0.86	+0.6
1,530,890	-		LRK54_RS07140	0.86	+0.2
1,530,890	-		LRK54_RS07140	0.86	+0.1
1,530,890	-		LRK54_RS07140	0.86	-1.3
1,530,890	-		LRK54_RS07140	0.86	+0.6
1,530,890	-		LRK54_RS07140	0.86	-0.5
1,530,890	-		LRK54_RS07140	0.86	+0.3
1,530,890	-		LRK54_RS07140	0.86	+0.9
1,530,890	-		LRK54_RS07140	0.86	+0.1
1,530,890	-		LRK54_RS07140	0.86	+0.6
1,530,890	-		LRK54_RS07140	0.86	+2.3
1,530,890	-		LRK54_RS07140	0.86	-1.2
1,530,890	-		LRK54_RS07140	0.86	+1.2
1,530,949	+		LRK54_RS07140	0.90	+0.2
1,530,950	-		LRK54_RS07140	0.90	-0.8
1,530,972	+				-0.3
1,530,972	+				-0.6
1,530,972	+				+0.1
1,530,972	+				-0.9
1,530,972	+				+1.5
1,530,972	+				+0.1
1,530,972	+				-1.1
1,530,972	+				+0.4
1,530,972	+				-0.2
1,530,972	+				+0.3
1,530,972	+				+0.8
1,530,972	+				-0.4
1,530,972	+				+0.4
1,530,972	+				-0.2
1,530,972	+				+0.7
1,530,973	-				-2.4
1,530,973	-				+0.7
1,530,973	-				+0.5
1,530,973	-				+0.3
1,530,973	-				-0.4
1,530,973	-				-0.4
1,530,973	-				+0.1
1,530,973	-				-0.6
1,530,973	-				+0.6
1,530,973	-				-0.3
1,530,973	-				+0.8
1,530,973	-				+1.1
1,530,973	-				-0.3
1,530,995	+				-1.3
1,530,996	-				+0.6
1,531,042	+				+0.4
1,531,042	+				+0.3
1,531,178	+				+0.2
1,531,178	+				-0.1
1,531,178	+				+0.7
1,531,178	+				-2.1
1,531,178	+				-1.5
1,531,178	+				+1.6
1,531,178	+				+0.6
1,531,178	+				+1.3
1,531,178	+				-0.1
1,531,178	+				+0.5
1,531,178	+				-0.1
1,531,178	+				+0.1
1,531,178	+				+0.4
1,531,178	+				-0.7
1,531,178	+				-0.0
1,531,178	+				+0.4
1,531,178	+				+0.7
1,531,178	+				-0.3
1,531,178	+				+0.4
1,531,178	+				+1.1
1,531,178	+				-0.0
1,531,179	-				+0.1
1,531,179	-				-0.1
1,531,179	-				-1.5
1,531,179	-				+0.7
1,531,179	-				+0.0
1,531,179	-				+0.8
1,531,179	-				+0.5
1,531,179	-				-1.4
1,531,179	-				+0.7
1,531,179	-				+0.1
1,531,179	-				+0.8
1,531,179	-				-1.1
1,531,179	-				+1.0
1,531,179	-				+0.1
1,531,179	-				+0.1
1,531,179	-				-1.5
1,531,179	-				-0.6
1,531,179	-				-0.9
1,531,179	-				-0.6
1,531,179	-				+0.8
1,531,179	-				+1.0
1,531,179	-				-0.4
1,531,179	-				-0.5
1,531,179	-				+0.6
1,531,208	+				+0.4
1,531,209	-				+1.3
1,531,209	-				-0.3
1,531,209	-				+0.9
1,531,209	-				+1.4
1,531,209	-				+0.4
1,531,245	+				-0.5
1,531,245	+				-0.4
1,531,245	+				-0.7
1,531,245	+				+3.9
1,531,245	+				+0.2
1,531,245	+				-0.1
1,531,246	-				+0.3
1,531,246	-				+0.4
1,531,246	-				-0.4
1,531,246	-				-0.2
1,531,246	-				+1.4
1,531,246	-				-0.0
1,531,246	-				+0.3
1,531,246	-				+1.3
1,531,289	+				-0.9
1,531,289	+				-0.3
1,531,289	+				+0.9
1,531,289	+				-0.3
1,531,289	+				+0.7
1,531,289	+				-0.0
1,531,289	+				+0.5
1,531,289	+				+1.8
1,531,289	+				-0.5
1,531,289	+				-1.1
1,531,289	+				-0.3
1,531,289	+				+0.6
1,531,289	+				+1.3
1,531,289	+				-0.4
1,531,289	+				+0.5
1,531,290	-				+1.3
1,531,290	-				-0.9
1,531,290	-				+0.1
1,531,290	-				-1.2
1,531,290	-				-1.6
1,531,290	-				+1.0
1,531,290	-				-0.8
1,531,290	-				+0.1
1,531,290	-				-0.9
1,531,290	-				+0.4
1,531,325	+		LRK54_RS07145	0.10	-0.7
1,531,325	+		LRK54_RS07145	0.10	+0.1
1,531,325	+		LRK54_RS07145	0.10	+1.1
1,531,325	+		LRK54_RS07145	0.10	+0.8
1,531,325	+		LRK54_RS07145	0.10	+1.3
1,531,325	+		LRK54_RS07145	0.10	-0.1
1,531,325	+		LRK54_RS07145	0.10	+1.1
1,531,325	+		LRK54_RS07145	0.10	+0.0
1,531,325	+		LRK54_RS07145	0.10	+0.9
1,531,325	+		LRK54_RS07145	0.10	-1.0
1,531,325	+		LRK54_RS07145	0.10	-0.7
1,531,326	-		LRK54_RS07145	0.11	-0.2
1,531,326	-		LRK54_RS07145	0.11	+0.3
1,531,326	-		LRK54_RS07145	0.11	+0.8
1,531,326	-		LRK54_RS07145	0.11	+0.9
1,531,326	-		LRK54_RS07145	0.11	+0.1
1,531,326	-		LRK54_RS07145	0.11	+1.0
1,531,326	-		LRK54_RS07145	0.11	+0.1
1,531,326	-		LRK54_RS07145	0.11	+1.3
1,531,383	+		LRK54_RS07145	0.14	-0.6
1,531,384	-		LRK54_RS07145	0.14	-0.0
1,531,391	+		LRK54_RS07145	0.15	-1.1
1,531,391	+		LRK54_RS07145	0.15	+2.3
1,531,391	+		LRK54_RS07145	0.15	+1.0
1,531,391	+		LRK54_RS07145	0.15	-0.2
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