Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_00865 and IAI47_00870 are separated by 225 nucleotides IAI47_00870 and IAI47_00875 are separated by 80 nucleotides IAI47_00875 and IAI47_00880 are separated by 273 nucleotides
IAI47_00865: IAI47_00865 - primosomal protein N', at 181,527 to 183,722
_00865
IAI47_00870: IAI47_00870 - 50S ribosomal protein L31, at 183,948 to 184,163
_00870
IAI47_00875: IAI47_00875 - met regulon transcriptional regulator MetJ, at 184,244 to 184,561
_00875
IAI47_00880: IAI47_00880 - cystathionine gamma-synthase, at 184,835 to 185,995
_00880
Position (kb) 184
185 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 183.715 kb on - strand at 183.723 kb on - strand at 183.723 kb on - strand at 183.723 kb on - strand at 183.723 kb on - strand at 183.723 kb on - strand at 183.757 kb on + strand at 183.757 kb on + strand at 183.757 kb on + strand at 183.757 kb on + strand at 183.757 kb on + strand at 183.757 kb on + strand at 183.758 kb on - strand at 183.758 kb on - strand at 183.758 kb on - strand at 183.758 kb on - strand at 183.762 kb on + strand at 183.762 kb on + strand at 183.762 kb on + strand at 183.762 kb on + strand at 183.762 kb on + strand at 183.763 kb on - strand at 183.763 kb on - strand at 183.763 kb on - strand at 183.763 kb on - strand at 183.786 kb on - strand at 183.862 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.869 kb on + strand at 183.871 kb on + strand at 183.871 kb on + strand at 183.871 kb on + strand at 184.127 kb on + strand, within IAI47_00870 at 184.128 kb on - strand, within IAI47_00870 at 184.161 kb on + strand at 184.161 kb on + strand at 184.167 kb on + strand at 184.167 kb on + strand at 184.167 kb on + strand at 184.167 kb on + strand at 184.168 kb on - strand at 184.168 kb on - strand at 184.269 kb on - strand at 184.276 kb on + strand, within IAI47_00875 at 184.328 kb on - strand, within IAI47_00875 at 184.478 kb on - strand, within IAI47_00875 at 184.478 kb on - strand, within IAI47_00875 at 184.538 kb on - strand at 184.539 kb on + strand at 184.540 kb on - strand at 184.567 kb on - strand at 184.571 kb on + strand at 184.571 kb on + strand at 184.575 kb on + strand at 184.575 kb on + strand at 184.586 kb on - strand at 184.586 kb on - strand at 184.608 kb on + strand at 184.609 kb on - strand at 184.609 kb on - strand at 184.640 kb on - strand at 184.640 kb on - strand at 184.703 kb on - strand at 184.703 kb on - strand at 184.715 kb on + strand at 184.715 kb on + strand at 184.715 kb on + strand at 184.737 kb on + strand at 184.751 kb on + strand at 184.751 kb on + strand at 184.751 kb on + strand at 184.752 kb on - strand at 184.765 kb on + strand at 184.766 kb on - strand at 184.766 kb on - strand at 184.766 kb on - strand at 184.766 kb on - strand at 184.776 kb on - strand at 184.776 kb on - strand at 184.802 kb on - strand at 184.802 kb on - strand at 184.802 kb on - strand at 184.802 kb on - strand at 184.844 kb on - strand at 184.892 kb on + strand at 184.892 kb on + strand at 184.892 kb on + strand at 184.893 kb on - strand at 184.893 kb on - strand at 184.893 kb on - strand at 184.893 kb on - strand at 184.924 kb on + strand at 184.924 kb on + strand at 184.924 kb on + strand at 184.924 kb on + strand at 184.924 kb on + strand at 184.925 kb on - strand at 184.925 kb on - strand at 184.925 kb on - strand at 184.925 kb on - strand at 184.925 kb on - strand at 184.925 kb on - strand at 184.931 kb on + strand at 184.931 kb on + strand at 184.932 kb on - strand at 184.949 kb on - strand at 184.970 kb on + strand, within IAI47_00880 at 184.971 kb on - strand, within IAI47_00880 at 184.971 kb on - strand, within IAI47_00880 at 184.971 kb on - strand, within IAI47_00880 at 184.971 kb on - strand, within IAI47_00880 at 184.971 kb on - strand, within IAI47_00880 at 184.971 kb on - strand, within IAI47_00880 at 185.004 kb on + strand, within IAI47_00880 at 185.004 kb on + strand, within IAI47_00880 at 185.005 kb on - strand, within IAI47_00880 at 185.005 kb on - strand, within IAI47_00880 at 185.005 kb on - strand, within IAI47_00880 at 185.012 kb on - strand, within IAI47_00880 at 185.012 kb on - strand, within IAI47_00880 at 185.012 kb on - strand, within IAI47_00880 at 185.012 kb on - strand, within IAI47_00880 at 185.046 kb on + strand, within IAI47_00880 at 185.046 kb on + strand, within IAI47_00880 at 185.046 kb on + strand, within IAI47_00880 at 185.049 kb on + strand, within IAI47_00880 at 185.049 kb on + strand, within IAI47_00880 at 185.049 kb on + strand, within IAI47_00880 at 185.135 kb on + strand, within IAI47_00880 at 185.147 kb on + strand, within IAI47_00880 at 185.148 kb on - strand, within IAI47_00880 at 185.148 kb on - strand, within IAI47_00880 at 185.184 kb on - strand, within IAI47_00880 at 185.293 kb on - strand, within IAI47_00880 at 185.293 kb on - strand, within IAI47_00880 at 185.300 kb on - strand, within IAI47_00880 at 185.338 kb on + strand, within IAI47_00880 at 185.338 kb on + strand, within IAI47_00880 at 185.338 kb on + strand, within IAI47_00880 at 185.338 kb on + strand, within IAI47_00880 at 185.339 kb on - strand, within IAI47_00880 at 185.339 kb on - strand, within IAI47_00880 at 185.362 kb on + strand, within IAI47_00880 at 185.362 kb on + strand, within IAI47_00880 at 185.362 kb on + strand, within IAI47_00880 at 185.362 kb on + strand, within IAI47_00880 at 185.362 kb on + strand, within IAI47_00880 at 185.362 kb on + strand, within IAI47_00880 at 185.362 kb on + strand, within IAI47_00880 at 185.363 kb on - strand, within IAI47_00880 at 185.363 kb on - strand, within IAI47_00880 at 185.363 kb on - strand, within IAI47_00880 at 185.363 kb on - strand, within IAI47_00880 at 185.422 kb on + strand, within IAI47_00880 at 185.429 kb on + strand, within IAI47_00880 at 185.429 kb on + strand, within IAI47_00880 at 185.429 kb on + strand, within IAI47_00880 at 185.429 kb on + strand, within IAI47_00880 at 185.430 kb on - strand, within IAI47_00880 at 185.430 kb on - strand, within IAI47_00880 at 185.430 kb on - strand, within IAI47_00880 at 185.454 kb on + strand, within IAI47_00880 at 185.515 kb on + strand, within IAI47_00880 at 185.515 kb on + strand, within IAI47_00880 at 185.515 kb on + strand, within IAI47_00880 at 185.516 kb on - strand, within IAI47_00880 at 185.518 kb on + strand, within IAI47_00880 at 185.518 kb on + strand, within IAI47_00880 at 185.519 kb on - strand, within IAI47_00880 at 185.519 kb on - strand, within IAI47_00880 at 185.519 kb on - strand, within IAI47_00880 at 185.519 kb on - strand, within IAI47_00880 at 185.519 kb on - strand, within IAI47_00880 at 185.519 kb on - strand, within IAI47_00880 at 185.519 kb on - strand, within IAI47_00880 at 185.526 kb on + strand, within IAI47_00880 at 185.527 kb on - strand, within IAI47_00880 at 185.527 kb on - strand, within IAI47_00880 at 185.549 kb on + strand, within IAI47_00880 at 185.549 kb on + strand, within IAI47_00880 at 185.549 kb on + strand, within IAI47_00880 at 185.549 kb on + strand, within IAI47_00880 at 185.549 kb on + strand, within IAI47_00880 at 185.549 kb on + strand, within IAI47_00880 at 185.550 kb on - strand, within IAI47_00880 at 185.550 kb on - strand, within IAI47_00880 at 185.550 kb on - strand, within IAI47_00880
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, aerobic remove 183,715 - +1.2 183,723 - +0.6 183,723 - -0.4 183,723 - -0.3 183,723 - -1.2 183,723 - -0.2 183,757 + -0.4 183,757 + -0.2 183,757 + +0.2 183,757 + -0.3 183,757 + +0.1 183,757 + -0.6 183,758 - -0.4 183,758 - -0.4 183,758 - +0.2 183,758 - -0.8 183,762 + -0.3 183,762 + -0.0 183,762 + +0.7 183,762 + -0.7 183,762 + +0.3 183,763 - +0.9 183,763 - +1.4 183,763 - -0.1 183,763 - -0.3 183,786 - -0.0 183,862 + -0.4 183,869 + -1.7 183,869 + -0.5 183,869 + -1.2 183,869 + +0.7 183,869 + -1.1 183,869 + -0.7 183,869 + +0.6 183,869 + -0.8 183,869 + +0.7 183,869 + +0.1 183,869 + -0.9 183,869 + -1.3 183,869 + -0.6 183,869 + -2.3 183,869 + -0.9 183,869 + +1.6 183,869 + -0.5 183,871 + -1.6 183,871 + -2.4 183,871 + -1.0 184,127 + IAI47_00870 0.83 -0.1 184,128 - IAI47_00870 0.83 -0.8 184,161 + -2.6 184,161 + -2.5 184,167 + -0.4 184,167 + +0.2 184,167 + +0.1 184,167 + -0.3 184,168 - +0.3 184,168 - -1.6 184,269 - +0.7 184,276 + IAI47_00875 0.10 +0.7 184,328 - IAI47_00875 0.26 -0.6 184,478 - IAI47_00875 0.74 -0.8 184,478 - IAI47_00875 0.74 +0.7 184,538 - -1.0 184,539 + +0.4 184,540 - -0.1 184,567 - -1.3 184,571 + +2.7 184,571 + +0.7 184,575 + -1.6 184,575 + -2.1 184,586 - +1.4 184,586 - +0.4 184,608 + -0.4 184,609 - -1.7 184,609 - -0.7 184,640 - +1.1 184,640 - -1.9 184,703 - -0.8 184,703 - +0.3 184,715 + -0.6 184,715 + -0.4 184,715 + +0.2 184,737 + -0.5 184,751 + -0.3 184,751 + +0.2 184,751 + +0.2 184,752 - -0.7 184,765 + +0.7 184,766 - -1.8 184,766 - -0.3 184,766 - +0.2 184,766 - -0.1 184,776 - +0.3 184,776 - -1.2 184,802 - -2.0 184,802 - -3.0 184,802 - -2.9 184,802 - -3.4 184,844 - -1.5 184,892 + -1.4 184,892 + -1.4 184,892 + -2.2 184,893 - -4.6 184,893 - -0.6 184,893 - -4.1 184,893 - -3.4 184,924 + -2.5 184,924 + -1.0 184,924 + -1.9 184,924 + -5.3 184,924 + -3.2 184,925 - -2.9 184,925 - -1.8 184,925 - -3.5 184,925 - -1.8 184,925 - -3.2 184,925 - -2.3 184,931 + -3.2 184,931 + -2.9 184,932 - -1.1 184,949 - -3.0 184,970 + IAI47_00880 0.12 -4.6 184,971 - IAI47_00880 0.12 -0.3 184,971 - IAI47_00880 0.12 -4.7 184,971 - IAI47_00880 0.12 -0.5 184,971 - IAI47_00880 0.12 -2.2 184,971 - IAI47_00880 0.12 -3.1 184,971 - IAI47_00880 0.12 -1.1 185,004 + IAI47_00880 0.15 -4.0 185,004 + IAI47_00880 0.15 -3.3 185,005 - IAI47_00880 0.15 -2.1 185,005 - IAI47_00880 0.15 -3.0 185,005 - IAI47_00880 0.15 -2.6 185,012 - IAI47_00880 0.15 -2.6 185,012 - IAI47_00880 0.15 -3.6 185,012 - IAI47_00880 0.15 -3.8 185,012 - IAI47_00880 0.15 -0.4 185,046 + IAI47_00880 0.18 -2.1 185,046 + IAI47_00880 0.18 -4.6 185,046 + IAI47_00880 0.18 -0.1 185,049 + IAI47_00880 0.18 -0.6 185,049 + IAI47_00880 0.18 -3.5 185,049 + IAI47_00880 0.18 -2.9 185,135 + IAI47_00880 0.26 -2.2 185,147 + IAI47_00880 0.27 -2.2 185,148 - IAI47_00880 0.27 -4.0 185,148 - IAI47_00880 0.27 -2.2 185,184 - IAI47_00880 0.30 -5.0 185,293 - IAI47_00880 0.39 -2.5 185,293 - IAI47_00880 0.39 -1.1 185,300 - IAI47_00880 0.40 -2.3 185,338 + IAI47_00880 0.43 -1.0 185,338 + IAI47_00880 0.43 -1.2 185,338 + IAI47_00880 0.43 -1.4 185,338 + IAI47_00880 0.43 -2.8 185,339 - IAI47_00880 0.43 +0.7 185,339 - IAI47_00880 0.43 -4.3 185,362 + IAI47_00880 0.45 -2.0 185,362 + IAI47_00880 0.45 -3.6 185,362 + IAI47_00880 0.45 -2.7 185,362 + IAI47_00880 0.45 -3.2 185,362 + IAI47_00880 0.45 -1.8 185,362 + IAI47_00880 0.45 -0.7 185,362 + IAI47_00880 0.45 -2.8 185,363 - IAI47_00880 0.45 -4.3 185,363 - IAI47_00880 0.45 -3.4 185,363 - IAI47_00880 0.45 -2.3 185,363 - IAI47_00880 0.45 -2.5 185,422 + IAI47_00880 0.51 -4.4 185,429 + IAI47_00880 0.51 -4.3 185,429 + IAI47_00880 0.51 -3.9 185,429 + IAI47_00880 0.51 -1.9 185,429 + IAI47_00880 0.51 -2.7 185,430 - IAI47_00880 0.51 -1.9 185,430 - IAI47_00880 0.51 -2.5 185,430 - IAI47_00880 0.51 -3.3 185,454 + IAI47_00880 0.53 -1.6 185,515 + IAI47_00880 0.59 -2.9 185,515 + IAI47_00880 0.59 -4.3 185,515 + IAI47_00880 0.59 -3.1 185,516 - IAI47_00880 0.59 -0.8 185,518 + IAI47_00880 0.59 -1.8 185,518 + IAI47_00880 0.59 -2.2 185,519 - IAI47_00880 0.59 -2.1 185,519 - IAI47_00880 0.59 -2.4 185,519 - IAI47_00880 0.59 -5.2 185,519 - IAI47_00880 0.59 -4.2 185,519 - IAI47_00880 0.59 -3.5 185,519 - IAI47_00880 0.59 -3.6 185,519 - IAI47_00880 0.59 -4.0 185,526 + IAI47_00880 0.60 -3.9 185,527 - IAI47_00880 0.60 -3.3 185,527 - IAI47_00880 0.60 -3.1 185,549 + IAI47_00880 0.61 -1.6 185,549 + IAI47_00880 0.61 -2.9 185,549 + IAI47_00880 0.61 -1.6 185,549 + IAI47_00880 0.61 -2.3 185,549 + IAI47_00880 0.61 -1.3 185,549 + IAI47_00880 0.61 -2.7 185,550 - IAI47_00880 0.62 -2.5 185,550 - IAI47_00880 0.62 -5.2 185,550 - IAI47_00880 0.62 -3.5
Or see this region's nucleotide sequence