Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22345 and HSERO_RS22350 are separated by 109 nucleotides HSERO_RS22350 and HSERO_RS22355 are separated by 15 nucleotides HSERO_RS22355 and HSERO_RS22360 are separated by 1 nucleotides
HSERO_RS22345: HSERO_RS22345 - urea carboxylase, at 5,111,553 to 5,115,176
_RS22345
HSERO_RS22350: HSERO_RS22350 - urea carboxylase, at 5,115,286 to 5,115,921
_RS22350
HSERO_RS22355: HSERO_RS22355 - urea carboxylase, at 5,115,937 to 5,116,668
_RS22355
HSERO_RS22360: HSERO_RS22360 - lauroyl acyltransferase, at 5,116,670 to 5,117,446
_RS22360
Position (kb) 5115
5116 Strain fitness (log2 ratio) -1
0
1 at 5114.304 kb on + strand, within HSERO_RS22345 at 5114.304 kb on + strand, within HSERO_RS22345 at 5114.441 kb on + strand, within HSERO_RS22345 at 5114.468 kb on + strand, within HSERO_RS22345 at 5114.481 kb on + strand, within HSERO_RS22345 at 5114.494 kb on - strand at 5114.809 kb on - strand, within HSERO_RS22345 at 5114.887 kb on + strand at 5115.074 kb on + strand at 5115.251 kb on - strand at 5115.255 kb on + strand at 5115.255 kb on + strand at 5115.263 kb on - strand at 5115.272 kb on + strand at 5115.295 kb on + strand at 5115.297 kb on - strand at 5115.650 kb on + strand, within HSERO_RS22350 at 5116.306 kb on - strand, within HSERO_RS22355 at 5116.344 kb on + strand, within HSERO_RS22355 at 5116.360 kb on - strand, within HSERO_RS22355 at 5116.428 kb on - strand, within HSERO_RS22355 at 5116.473 kb on - strand, within HSERO_RS22355 at 5116.666 kb on - strand at 5116.907 kb on + strand, within HSERO_RS22360
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 5,114,304 + HSERO_RS22345 0.76 +0.4 5,114,304 + HSERO_RS22345 0.76 +0.1 5,114,441 + HSERO_RS22345 0.80 +0.6 5,114,468 + HSERO_RS22345 0.80 -0.6 5,114,481 + HSERO_RS22345 0.81 +1.0 5,114,494 - -0.3 5,114,809 - HSERO_RS22345 0.90 -0.0 5,114,887 + -0.3 5,115,074 + -0.4 5,115,251 - -0.2 5,115,255 + -0.4 5,115,255 + -1.7 5,115,263 - -0.3 5,115,272 + +0.7 5,115,295 + -1.1 5,115,297 - +0.5 5,115,650 + HSERO_RS22350 0.57 +1.4 5,116,306 - HSERO_RS22355 0.50 +1.7 5,116,344 + HSERO_RS22355 0.56 -0.6 5,116,360 - HSERO_RS22355 0.58 +0.4 5,116,428 - HSERO_RS22355 0.67 -0.9 5,116,473 - HSERO_RS22355 0.73 -0.3 5,116,666 - -0.2 5,116,907 + HSERO_RS22360 0.31 -0.5
Or see this region's nucleotide sequence