Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS19945

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
4,577,352	+		HSERO_RS19940	0.29	+0.7
4,577,362	-		HSERO_RS19940	0.29	-0.5
4,577,441	-		HSERO_RS19940	0.36	+0.3
4,577,547	-		HSERO_RS19940	0.45	+1.0
4,577,585	-		HSERO_RS19940	0.48	+1.7
4,577,598	+		HSERO_RS19940	0.49	+0.1
4,577,598	+		HSERO_RS19940	0.49	-0.2
4,577,692	+		HSERO_RS19940	0.57	-2.0
4,577,747	+		HSERO_RS19940	0.62	+0.3
4,578,088	-				-0.4
4,578,421	+		HSERO_RS19945	0.18	+0.3
4,578,474	+		HSERO_RS19945	0.23	+1.0
4,578,474	+		HSERO_RS19945	0.23	+0.6
4,578,477	-		HSERO_RS19945	0.24	+0.6
4,578,482	-		HSERO_RS19945	0.24	+0.6
4,578,482	-		HSERO_RS19945	0.24	-0.1
4,578,528	+		HSERO_RS19945	0.29	+0.9
4,578,536	-		HSERO_RS19945	0.30	-0.2
4,578,802	-		HSERO_RS19945	0.58	+0.2
4,578,838	-		HSERO_RS19945	0.61	+1.1
4,578,855	-		HSERO_RS19945	0.63	+0.3
4,579,038	+				+2.4
4,579,038	+		HSERO_RS19945	0.82	-0.2
4,579,215	+				-0.6
4,579,223	-				+0.4
4,579,399	-		HSERO_RS19950	0.17	-0.4
4,579,789	-		HSERO_RS19950	0.54	-0.2
4,579,802	+		HSERO_RS19950	0.56	+1.7
4,579,915	-		HSERO_RS19950	0.66	-0.4