Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS14640

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
3,314,407	-		HSERO_RS14635	0.54	+0.0
3,314,436	-		HSERO_RS14635	0.56	-1.0
3,314,518	+		HSERO_RS14635	0.61	-0.9
3,314,526	-		HSERO_RS14635	0.61	-0.4
3,314,717	+		HSERO_RS14635	0.74	-0.2
3,314,908	-		HSERO_RS14635	0.86	-0.7
3,314,985	-				-0.1
3,315,307	-				-2.7
3,315,333	-				-2.7
3,315,370	+				-3.7
3,315,438	-				-3.4
3,315,507	+				-3.4
3,315,515	-				-2.0
3,315,572	-		HSERO_RS14640	0.13	-1.6
3,315,641	-		HSERO_RS14640	0.17	-1.9
3,315,648	-		HSERO_RS14640	0.18	-1.2
3,315,798	+		HSERO_RS14640	0.27	-1.0
3,316,006	+		HSERO_RS14640	0.39	-0.2
3,316,241	+		HSERO_RS14640	0.53	-1.8
3,316,475	-		HSERO_RS14640	0.67	-0.8
3,316,492	+		HSERO_RS14640	0.68	-3.1
3,316,700	+		HSERO_RS14640	0.80	-2.2
3,316,858	+		HSERO_RS14640	0.89	-1.7
3,316,914	-				-2.3
3,316,955	-				-1.5
3,317,158	-				-0.0
3,317,158	-				+1.9
3,317,255	-				-0.4
3,317,320	+				-0.9
3,317,320	+				+0.7