Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS14620

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
3,308,102	+		HSERO_RS14615	0.16	-0.6
3,308,206	-		HSERO_RS14615	0.28	+0.6
3,308,331	-		HSERO_RS14615	0.42	+0.8
3,308,454	+		HSERO_RS14615	0.57	-0.5
3,308,462	-		HSERO_RS14615	0.58	-1.3
3,308,603	+		HSERO_RS14615	0.74	+0.5
3,308,611	-				+3.1
3,308,628	+		HSERO_RS14615	0.77	-0.1
3,308,634	+		HSERO_RS14615	0.78	-0.3
3,308,693	+		HSERO_RS14615	0.85	+0.7
3,308,755	+				-0.4
3,308,831	+				+0.4
3,308,890	-				-0.5
3,309,013	-				+0.8
3,309,013	-				+0.9
3,309,023	-				+0.8
3,309,102	+				-0.5
3,309,179	+				+0.2
3,309,209	-		HSERO_RS14620	0.10	+0.7
3,309,224	-		HSERO_RS14620	0.11	+0.1
3,309,487	+		HSERO_RS14620	0.27	+0.5
3,309,599	+		HSERO_RS14620	0.34	+0.0
3,310,377	-		HSERO_RS14620	0.83	+0.5
3,310,379	+		HSERO_RS14620	0.83	+0.0
3,310,567	+				+1.1
3,310,601	+				-0.9
3,310,723	-				+0.0
3,310,754	-				+2.7
3,310,918	+				+0.4
3,310,918	+				-0.7
3,310,926	-				+1.6
3,310,980	+		HSERO_RS14625	0.11	-0.0
3,311,047	+		HSERO_RS14625	0.15	-0.8
3,311,055	-		HSERO_RS14625	0.15	-0.5
3,311,259	+		HSERO_RS14625	0.28	+0.0
3,311,368	+		HSERO_RS14625	0.35	+0.4
3,311,463	-		HSERO_RS14625	0.41	+1.1
3,311,510	-		HSERO_RS14625	0.44	-0.2