Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10570

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
2,379,710	+		HSERO_RS10565	0.37	-1.6
2,379,782	-		HSERO_RS10565	0.42	-0.7
2,379,825	-				+0.3
2,379,982	+		HSERO_RS10565	0.58	-0.3
2,380,038	+		HSERO_RS10565	0.62	+1.3
2,380,046	-		HSERO_RS10565	0.63	-0.6
2,380,046	-		HSERO_RS10565	0.63	+1.5
2,380,046	-		HSERO_RS10565	0.63	-2.0
2,380,158	-		HSERO_RS10565	0.71	+0.4
2,380,458	+				-0.1
2,380,814	-				-0.6
2,380,943	-		HSERO_RS10570	0.39	+0.4
2,381,165	-		HSERO_RS10570	0.72	+2.4
2,381,227	+				-0.6
2,381,268	+		HSERO_RS10570	0.87	+0.4
2,381,283	+		HSERO_RS10570	0.90	+0.0
2,381,291	-				-0.3
2,381,297	-				+0.2
2,381,675	+		HSERO_RS10575	0.44	+0.4
2,381,714	+		HSERO_RS10575	0.50	+0.3
2,381,770	+		HSERO_RS10575	0.58	-0.4
2,382,237	+		HSERO_RS10580	0.21	-1.1
2,382,263	-		HSERO_RS10580	0.25	+0.3
2,382,299	+		HSERO_RS10580	0.29	+1.2
2,382,304	+		HSERO_RS10580	0.30	+0.1
2,382,304	+		HSERO_RS10580	0.30	+1.0